Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm43206-201ENSMUST00000197990 114 ntBASIC-4.62□□□□□ -3.15
Ccdc88bQ4QRL3 Gm25985-201ENSMUST00000122677 107 ntBASIC-4.62□□□□□ -3.15
Ccdc88bQ4QRL3 Gm25978-201ENSMUST00000158698 90 ntBASIC-4.62□□□□□ -3.15
Ccdc88bQ4QRL3 Gm22448-201ENSMUST00000179254 107 ntBASIC-4.62□□□□□ -3.15
Ccdc88bQ4QRL3 AC154245.1-201ENSMUST00000224615 601 ntBASIC-4.62□□□□□ -3.15
Ccdc88bQ4QRL3 Gm24438-201ENSMUST00000157893 115 ntBASIC-4.63□□□□□ -3.15
Ccdc88bQ4QRL3 Gm23315-201ENSMUST00000158003 109 ntBASIC-4.63□□□□□ -3.15
Ccdc88bQ4QRL3 Mir15b-201ENSMUST00000083646 64 ntBASIC-4.65□□□□□ -3.15
Ccdc88bQ4QRL3 Gm22985-201ENSMUST00000122754 116 ntBASIC-4.66□□□□□ -3.16
Ccdc88bQ4QRL3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-4.66□□□□□ -3.16
Ccdc88bQ4QRL3 AL606472.1-201ENSMUST00000224628 275 ntBASIC-4.66□□□□□ -3.16
Ccdc88bQ4QRL3 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.66□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22365-201ENSMUST00000093750 117 ntBASIC-4.67□□□□□ -3.16
Ccdc88bQ4QRL3 Gm25322-201ENSMUST00000122556 104 ntBASIC-4.68□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22139-201ENSMUST00000158747 105 ntBASIC-4.69□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22699-201ENSMUST00000175376 105 ntBASIC-4.69□□□□□ -3.16
Ccdc88bQ4QRL3 Gm27905-201ENSMUST00000184005 207 ntBASIC-4.69□□□□□ -3.16
Ccdc88bQ4QRL3 Gm44481-201ENSMUST00000197288 84 ntBASIC-4.69□□□□□ -3.16
Ccdc88bQ4QRL3 Gm42844-201ENSMUST00000200355 112 ntBASIC-4.69□□□□□ -3.16
Ccdc88bQ4QRL3 Mir669b-201ENSMUST00000102172 97 ntBASIC-4.7□□□□□ -3.16
Ccdc88bQ4QRL3 AC158537.2-201ENSMUST00000223575 150 ntBASIC-4.7□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22746-201ENSMUST00000082494 107 ntBASIC-4.7□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22717-201ENSMUST00000122703 171 ntBASIC-4.72□□□□□ -3.16
Ccdc88bQ4QRL3 Mir21b-201ENSMUST00000184317 108 ntBASIC-4.72□□□□□ -3.16
Ccdc88bQ4QRL3 Gm22373-201ENSMUST00000104584 89 ntBASIC-4.73□□□□□ -3.17
Ccdc88bQ4QRL3 Gm23003-201ENSMUST00000179948 107 ntBASIC-4.73□□□□□ -3.17
Ccdc88bQ4QRL3 Gm27747-201ENSMUST00000184707 85 ntBASIC-4.73□□□□□ -3.17
Ccdc88bQ4QRL3 Gm22358-201ENSMUST00000082877 122 ntBASIC-4.74□□□□□ -3.17
Ccdc88bQ4QRL3 Gm25188-201ENSMUST00000083913 122 ntBASIC-4.74□□□□□ -3.17
Ccdc88bQ4QRL3 AC151902.2-201ENSMUST00000226419 301 ntBASIC-4.75□□□□□ -3.17
Ccdc88bQ4QRL3 Snord72-201ENSMUST00000104549 81 ntBASIC-4.75□□□□□ -3.17
Ccdc88bQ4QRL3 Gm24132-201ENSMUST00000104745 91 ntBASIC-4.75□□□□□ -3.17
Ccdc88bQ4QRL3 Gm14293-201ENSMUST00000118528 577 ntBASIC-4.76□□□□□ -3.17
Ccdc88bQ4QRL3 Gm22242-201ENSMUST00000175224 118 ntBASIC-4.76□□□□□ -3.17
Ccdc88bQ4QRL3 Mir5624-201ENSMUST00000176635 61 ntBASIC-4.77□□□□□ -3.17
Ccdc88bQ4QRL3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-4.77□□□□□ -3.17
Ccdc88bQ4QRL3 Gm23841-201ENSMUST00000116951 114 ntBASIC-4.78□□□□□ -3.17
Ccdc88bQ4QRL3 Snord80-202ENSMUST00000199023 77 ntBASIC-4.78□□□□□ -3.17
Ccdc88bQ4QRL3 Gm26468-201ENSMUST00000158644 106 ntBASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Gm26499-201ENSMUST00000178544 79 ntBASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Gm26096-201ENSMUST00000179084 79 ntBASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Mir7227-201ENSMUST00000200408 59 ntBASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Gm26447-201ENSMUST00000082448 129 ntBASIC-4.79□□□□□ -3.18
Ccdc88bQ4QRL3 Gm25779-201ENSMUST00000116710 95 ntBASIC-4.8□□□□□ -3.18
Ccdc88bQ4QRL3 Gm25773-201ENSMUST00000116718 127 ntBASIC-4.81□□□□□ -3.18
Ccdc88bQ4QRL3 Gm25798-201ENSMUST00000082641 107 ntBASIC-4.81□□□□□ -3.18
Ccdc88bQ4QRL3 Gm28011-201ENSMUST00000184097 175 ntBASIC-4.83□□□□□ -3.18
Ccdc88bQ4QRL3 Mir463-201ENSMUST00000093570 75 ntBASIC-4.83□□□□□ -3.18
Ccdc88bQ4QRL3 Gm22677-201ENSMUST00000116977 108 ntBASIC-4.84□□□□□ -3.18
Ccdc88bQ4QRL3 Gm24054-201ENSMUST00000158619 105 ntBASIC-4.84□□□□□ -3.18
Ccdc88bQ4QRL3 Gm22965-201ENSMUST00000157958 101 ntBASIC-4.85□□□□□ -3.19
Ccdc88bQ4QRL3 Gm24842-201ENSMUST00000158681 54 ntBASIC-4.85□□□□□ -3.19
Ccdc88bQ4QRL3 Gm45859-201ENSMUST00000212794 214 ntBASIC-4.85□□□□□ -3.19
Ccdc88bQ4QRL3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-4.86□□□□□ -3.19
Ccdc88bQ4QRL3 Mir875-201ENSMUST00000104698 78 ntBASIC-4.87□□□□□ -3.19
Ccdc88bQ4QRL3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-4.87□□□□□ -3.19
Ccdc88bQ4QRL3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-4.87□□□□□ -3.19
Ccdc88bQ4QRL3 Gm24297-201ENSMUST00000158300 68 ntBASIC-4.87□□□□□ -3.19
Ccdc88bQ4QRL3 Gm25111-201ENSMUST00000116686 147 ntBASIC-4.88□□□□□ -3.19
Ccdc88bQ4QRL3 Gm23047-201ENSMUST00000177661 94 ntBASIC-4.88□□□□□ -3.19
Ccdc88bQ4QRL3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-4.89□□□□□ -3.19
Ccdc88bQ4QRL3 Gm25867-201ENSMUST00000158254 103 ntBASIC-4.9□□□□□ -3.19
Ccdc88bQ4QRL3 Gm24099-201ENSMUST00000083384 107 ntBASIC-4.9□□□□□ -3.19
Ccdc88bQ4QRL3 Gm25061-201ENSMUST00000104665 107 ntBASIC-4.91□□□□□ -3.2
Ccdc88bQ4QRL3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-4.91□□□□□ -3.2
Ccdc88bQ4QRL3 Gm26097-201ENSMUST00000179642 93 ntBASIC-4.92□□□□□ -3.2
Ccdc88bQ4QRL3 Gm27975-201ENSMUST00000184400 101 ntBASIC-4.92□□□□□ -3.2
Ccdc88bQ4QRL3 Gm25623-201ENSMUST00000157216 108 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Gm25425-201ENSMUST00000157611 96 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Gm22070-201ENSMUST00000178475 107 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Mir664-201ENSMUST00000196796 69 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Gm44149-201ENSMUST00000204256 226 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Gm23545-201ENSMUST00000158205 104 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 AC238676.2-201ENSMUST00000220910 94 ntBASIC-4.94□□□□□ -3.2
Ccdc88bQ4QRL3 Gm22199-201ENSMUST00000122660 126 ntBASIC-4.95□□□□□ -3.2
Ccdc88bQ4QRL3 Gm25970-201ENSMUST00000157165 86 ntBASIC-4.95□□□□□ -3.2
Ccdc88bQ4QRL3 Gm26008-201ENSMUST00000158797 99 ntBASIC-4.95□□□□□ -3.2
Ccdc88bQ4QRL3 Gm28489-201ENSMUST00000186655 316 ntBASIC-4.95□□□□□ -3.2
Ccdc88bQ4QRL3 Gm44392-201ENSMUST00000196758 115 ntBASIC-4.95□□□□□ -3.2
Ccdc88bQ4QRL3 Gm22558-201ENSMUST00000157326 95 ntBASIC-4.97□□□□□ -3.21
Ccdc88bQ4QRL3 Gm27579-201ENSMUST00000158113 63 ntBASIC-4.97□□□□□ -3.21
Ccdc88bQ4QRL3 Gm23406-201ENSMUST00000082537 122 ntBASIC-4.98□□□□□ -3.21
Ccdc88bQ4QRL3 Gm22605-201ENSMUST00000158289 108 ntBASIC-4.99□□□□□ -3.21
Ccdc88bQ4QRL3 Gm25681-201ENSMUST00000083938 106 ntBASIC-5.02□□□□□ -3.21
Ccdc88bQ4QRL3 Gm24393-201ENSMUST00000158135 97 ntBASIC-5.03□□□□□ -3.21
Ccdc88bQ4QRL3 Gm22057-201ENSMUST00000083387 107 ntBASIC-5.03□□□□□ -3.21
Ccdc88bQ4QRL3 Gm25654-201ENSMUST00000158467 88 ntBASIC-5.05□□□□□ -3.22
Ccdc88bQ4QRL3 Gm24637-201ENSMUST00000158674 85 ntBASIC-5.06□□□□□ -3.22
Ccdc88bQ4QRL3 Gm25834-201ENSMUST00000158916 101 ntBASIC-5.07□□□□□ -3.22
Ccdc88bQ4QRL3 Gm26437-201ENSMUST00000082595 105 ntBASIC-5.07□□□□□ -3.22
Ccdc88bQ4QRL3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-5.07□□□□□ -3.22
Ccdc88bQ4QRL3 Gm22973-201ENSMUST00000083298 191 ntBASIC-5.07□□□□□ -3.22
Ccdc88bQ4QRL3 Gm24259-201ENSMUST00000083740 107 ntBASIC-5.07□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-5.09□□□□□ -3.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms