Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Snord71-201ENSMUST00000104361 85 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 Gm27289-201ENSMUST00000183341 82 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.17□□□□□ -2.22
Rnf40Q3U319 Gm25408-201ENSMUST00000104104 133 ntBASIC1.16□□□□□ -2.22
Rnf40Q3U319 Gm24020-201ENSMUST00000180156 108 ntBASIC1.16□□□□□ -2.22
Rnf40Q3U319 Gm27656-201ENSMUST00000185055 80 ntBASIC1.15□□□□□ -2.23
Rnf40Q3U319 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.15□□□□□ -2.23
Rnf40Q3U319 Gm24651-201ENSMUST00000157107 107 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 Gm25132-201ENSMUST00000082652 107 ntBASIC1.14□□□□□ -2.23
Rnf40Q3U319 Gm25170-201ENSMUST00000104191 129 ntBASIC1.13□□□□□ -2.23
Rnf40Q3U319 Gm22301-201ENSMUST00000082656 107 ntBASIC1.13□□□□□ -2.23
Rnf40Q3U319 Gm22780-201ENSMUST00000104084 132 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm44803-201ENSMUST00000204384 156 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm23240-201ENSMUST00000083009 121 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Mir142b-201ENSMUST00000083486 115 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm24258-201ENSMUST00000083739 133 ntBASIC1.12□□□□□ -2.23
Rnf40Q3U319 Gm26301-201ENSMUST00000104813 95 ntBASIC1.11□□□□□ -2.23
Rnf40Q3U319 Mir7063-201ENSMUST00000184158 91 ntBASIC1.11□□□□□ -2.23
Rnf40Q3U319 Gm25274-201ENSMUST00000104296 135 ntBASIC1.1□□□□□ -2.23
Rnf40Q3U319 Mir6381-201ENSMUST00000183426 87 ntBASIC1.1□□□□□ -2.23
Rnf40Q3U319 Gm22469-201ENSMUST00000104118 133 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm23340-201ENSMUST00000158955 123 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm23636-201ENSMUST00000175070 95 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm44457-201ENSMUST00000198109 76 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm22981-201ENSMUST00000082611 75 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Mir362-201ENSMUST00000093592 65 ntBASIC1.09□□□□□ -2.23
Rnf40Q3U319 Gm44490-201ENSMUST00000198566 127 ntBASIC1.08□□□□□ -2.24
Rnf40Q3U319 Mir6389-201ENSMUST00000183661 102 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Mir6394-201ENSMUST00000184738 99 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm45617-201ENSMUST00000211132 209 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm25683-201ENSMUST00000083940 131 ntBASIC1.07□□□□□ -2.24
Rnf40Q3U319 Gm24431-201ENSMUST00000104073 66 ntBASIC1.06□□□□□ -2.24
Rnf40Q3U319 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.06□□□□□ -2.24
Rnf40Q3U319 Snord33-201ENSMUST00000083694 84 ntBASIC1.06□□□□□ -2.24
Rnf40Q3U319 Gm25378-201ENSMUST00000104333 129 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm37832-201ENSMUST00000118935 189 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22260-201ENSMUST00000178643 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22550-201ENSMUST00000179774 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir6380-201ENSMUST00000184334 81 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir3065-201ENSMUST00000198674 87 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm22060-201ENSMUST00000082558 107 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Mir22-201ENSMUST00000083595 95 ntBASIC1.05□□□□□ -2.24
Rnf40Q3U319 Gm25158-201ENSMUST00000177681 121 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm26229-201ENSMUST00000179699 121 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm42506-201ENSMUST00000202009 150 ntBASIC1.04□□□□□ -2.24
Rnf40Q3U319 Gm22565-201ENSMUST00000175540 69 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 AC124196.2-201ENSMUST00000224835 145 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 Mir344-201ENSMUST00000083634 95 ntBASIC1.03□□□□□ -2.24
Rnf40Q3U319 Gm25161-201ENSMUST00000158913 132 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Gm27798-201ENSMUST00000184989 71 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Mir200b-201ENSMUST00000083615 70 ntBASIC1.02□□□□□ -2.25
Rnf40Q3U319 Gm22157-201ENSMUST00000158410 104 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir1954-201ENSMUST00000175595 86 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir6985-201ENSMUST00000184641 61 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Mir196b-201ENSMUST00000083509 85 ntBASIC1.01□□□□□ -2.25
Rnf40Q3U319 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Rnf40Q3U319 Gm23607-201ENSMUST00000104550 126 ntBASIC1□□□□□ -2.25
Rnf40Q3U319 Mir18-201ENSMUST00000083469 96 ntBASIC1□□□□□ -2.25
Rnf40Q3U319 Gm24342-201ENSMUST00000103907 104 ntBASIC0.99□□□□□ -2.25
Rnf40Q3U319 Gm23969-201ENSMUST00000083324 74 ntBASIC0.99□□□□□ -2.25
Rnf40Q3U319 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm26227-201ENSMUST00000082510 101 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm24252-201ENSMUST00000083700 132 ntBASIC0.97□□□□□ -2.25
Rnf40Q3U319 Gm37750-201ENSMUST00000193563 129 ntBASIC0.96□□□□□ -2.26
Rnf40Q3U319 Mir224-201ENSMUST00000083608 82 ntBASIC0.96□□□□□ -2.26
Rnf40Q3U319 Gm22689-201ENSMUST00000102452 110 ntBASIC0.95□□□□□ -2.26
Rnf40Q3U319 Gm44301-201ENSMUST00000200362 143 ntBASIC0.95□□□□□ -2.26
Rnf40Q3U319 Mir1948-201ENSMUST00000157325 85 ntBASIC0.94□□□□□ -2.26
Rnf40Q3U319 Mir7663-201ENSMUST00000183950 61 ntBASIC0.94□□□□□ -2.26
Rnf40Q3U319 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 Gm22056-201ENSMUST00000083386 81 ntBASIC0.93□□□□□ -2.26
Rnf40Q3U319 Gm38208-201ENSMUST00000192476 114 ntBASIC0.92□□□□□ -2.26
Rnf40Q3U319 Gm44458-201ENSMUST00000196594 143 ntBASIC0.92□□□□□ -2.26
Rnf40Q3U319 Gm22239-201ENSMUST00000175220 103 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Gm27749-201ENSMUST00000183651 125 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Mir27b-201ENSMUST00000083541 73 ntBASIC0.91□□□□□ -2.26
Rnf40Q3U319 Gm22593-201ENSMUST00000104245 109 ntBASIC0.89□□□□□ -2.27
Rnf40Q3U319 Gm25506-201ENSMUST00000104339 70 ntBASIC0.89□□□□□ -2.27
Rnf40Q3U319 Gm23992-201ENSMUST00000174981 67 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Gm26236-201ENSMUST00000175536 137 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Gm25791-201ENSMUST00000083292 137 ntBASIC0.88□□□□□ -2.27
Rnf40Q3U319 Mir7065-201ENSMUST00000185110 61 ntBASIC0.86□□□□□ -2.27
Rnf40Q3U319 Mir702-201ENSMUST00000102285 109 ntBASIC0.85□□□□□ -2.27
Rnf40Q3U319 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Rnf40Q3U319 Gm20386-201ENSMUST00000174010 132 ntBASIC0.84□□□□□ -2.27
Rnf40Q3U319 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
Rnf40Q3U319 Gm45541-201ENSMUST00000210443 54 ntBASIC0.83□□□□□ -2.28
Rnf40Q3U319 Mir10b-201ENSMUST00000083566 68 ntBASIC0.82□□□□□ -2.28
Rnf40Q3U319 Gm24372-201ENSMUST00000104400 110 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 Gm25903-201ENSMUST00000158492 103 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.81□□□□□ -2.28
Rnf40Q3U319 Mir6896-201ENSMUST00000198033 73 ntBASIC0.8□□□□□ -2.28
Rnf40Q3U319 Gm27784-201ENSMUST00000184926 113 ntBASIC0.79□□□□□ -2.28
Rnf40Q3U319 Gm37646-201ENSMUST00000191756 111 ntBASIC0.79□□□□□ -2.28
Rnf40Q3U319 Gm24963-201ENSMUST00000157916 144 ntBASIC0.78□□□□□ -2.28
Rnf40Q3U319 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Rnf40Q3U319 Gm24579-201ENSMUST00000103964 144 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 176 ms