Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm11966-201ENSMUST00000119907 87 ntBASIC0.4□□□□□ -2.35
Ddb1Q3U1J4 Gm24884-201ENSMUST00000158784 119 ntBASIC0.4□□□□□ -2.35
Ddb1Q3U1J4 Gm45125-201ENSMUST00000206908 151 ntBASIC0.4□□□□□ -2.35
Ddb1Q3U1J4 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.4□□□□□ -2.35
Ddb1Q3U1J4 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.38□□□□□ -2.35
Ddb1Q3U1J4 Gm24796-201ENSMUST00000104007 107 ntBASIC0.38□□□□□ -2.35
Ddb1Q3U1J4 Gm25641-201ENSMUST00000175135 108 ntBASIC0.38□□□□□ -2.35
Ddb1Q3U1J4 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.38□□□□□ -2.35
Ddb1Q3U1J4 Snord67-201ENSMUST00000104033 111 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Gm25275-201ENSMUST00000104297 129 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Scarna8-201ENSMUST00000158333 131 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Gm23477-201ENSMUST00000158882 128 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Gm22298-201ENSMUST00000082662 133 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Snord45b-201ENSMUST00000082797 71 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Gm25186-201ENSMUST00000083909 108 ntBASIC0.37□□□□□ -2.35
Ddb1Q3U1J4 Mir717-201ENSMUST00000102259 109 ntBASIC0.36□□□□□ -2.35
Ddb1Q3U1J4 Gm23821-201ENSMUST00000158738 106 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 Gm28001-201ENSMUST00000183561 117 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 Gm37750-201ENSMUST00000193563 129 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 Mir3967-201ENSMUST00000198710 68 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 Gm25791-201ENSMUST00000083292 137 ntBASIC0.35□□□□□ -2.35
Ddb1Q3U1J4 Gm24070-201ENSMUST00000104519 130 ntBASIC0.34□□□□□ -2.36
Ddb1Q3U1J4 Gm22540-201ENSMUST00000158168 117 ntBASIC0.34□□□□□ -2.36
Ddb1Q3U1J4 Mir15b-201ENSMUST00000083646 64 ntBASIC0.34□□□□□ -2.36
Ddb1Q3U1J4 Mir23a-201ENSMUST00000083677 75 ntBASIC0.34□□□□□ -2.36
Ddb1Q3U1J4 Snora62-201ENSMUST00000082991 149 ntBASIC0.33□□□□□ -2.36
Ddb1Q3U1J4 Gm23749-201ENSMUST00000104223 131 ntBASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Gm22595-201ENSMUST00000104250 130 ntBASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Mir6904-201ENSMUST00000183443 67 ntBASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Mir3065-201ENSMUST00000198674 87 ntBASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.32□□□□□ -2.36
Ddb1Q3U1J4 Gm24833-201ENSMUST00000116775 120 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Gm23494-201ENSMUST00000116830 126 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Gm24381-201ENSMUST00000122697 104 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Gm25010-201ENSMUST00000158403 65 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Gm24226-201ENSMUST00000158826 97 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Gm27263-201ENSMUST00000184760 76 ntBASIC0.31□□□□□ -2.36
Ddb1Q3U1J4 Mir3089-201ENSMUST00000175350 84 ntBASIC0.3□□□□□ -2.36
Ddb1Q3U1J4 Gm25354-201ENSMUST00000179110 105 ntBASIC0.3□□□□□ -2.36
Ddb1Q3U1J4 Gm45617-201ENSMUST00000211132 209 ntBASIC0.28□□□□□ -2.36
Ddb1Q3U1J4 Gm25552-201ENSMUST00000158081 91 ntBASIC0.27□□□□□ -2.37
Ddb1Q3U1J4 Mir876-201ENSMUST00000104659 81 ntBASIC0.26□□□□□ -2.37
Ddb1Q3U1J4 Gm23036-201ENSMUST00000157885 99 ntBASIC0.26□□□□□ -2.37
Ddb1Q3U1J4 Gm23072-201ENSMUST00000158243 123 ntBASIC0.25□□□□□ -2.37
Ddb1Q3U1J4 Gm23159-201ENSMUST00000175088 77 ntBASIC0.25□□□□□ -2.37
Ddb1Q3U1J4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Ddb1Q3U1J4 Gm24400-201ENSMUST00000157865 107 ntBASIC0.24□□□□□ -2.37
Ddb1Q3U1J4 Mir6365-201ENSMUST00000183990 101 ntBASIC0.24□□□□□ -2.37
Ddb1Q3U1J4 Mir8107-201ENSMUST00000184024 117 ntBASIC0.24□□□□□ -2.37
Ddb1Q3U1J4 Gm23826-201ENSMUST00000157394 119 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Gm24903-201ENSMUST00000158131 126 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Gm23017-201ENSMUST00000177583 72 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Mir7231-201ENSMUST00000196252 61 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Gm24612-201ENSMUST00000083267 107 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Gm25652-201ENSMUST00000083780 103 ntBASIC0.23□□□□□ -2.37
Ddb1Q3U1J4 Gm22838-201ENSMUST00000158437 99 ntBASIC0.22□□□□□ -2.37
Ddb1Q3U1J4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Ddb1Q3U1J4 Gm23442-201ENSMUST00000082919 134 ntBASIC0.21□□□□□ -2.38
Ddb1Q3U1J4 Gm25952-201ENSMUST00000175329 74 ntBASIC0.2□□□□□ -2.38
Ddb1Q3U1J4 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.2□□□□□ -2.38
Ddb1Q3U1J4 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.19□□□□□ -2.38
Ddb1Q3U1J4 Gm26257-201ENSMUST00000122500 107 ntBASIC0.18□□□□□ -2.38
Ddb1Q3U1J4 Mir327-201ENSMUST00000199328 69 ntBASIC0.18□□□□□ -2.38
Ddb1Q3U1J4 Mir487b-201ENSMUST00000102265 82 ntBASIC0.17□□□□□ -2.38
Ddb1Q3U1J4 Gm25522-201ENSMUST00000158394 105 ntBASIC0.16□□□□□ -2.38
Ddb1Q3U1J4 Gm25183-201ENSMUST00000157752 106 ntBASIC0.15□□□□□ -2.39
Ddb1Q3U1J4 Gm24843-201ENSMUST00000158682 76 ntBASIC0.15□□□□□ -2.39
Ddb1Q3U1J4 Gm44328-201ENSMUST00000199331 75 ntBASIC0.15□□□□□ -2.39
Ddb1Q3U1J4 Gm23955-201ENSMUST00000157214 100 ntBASIC0.14□□□□□ -2.39
Ddb1Q3U1J4 Gm25950-201ENSMUST00000175331 100 ntBASIC0.14□□□□□ -2.39
Ddb1Q3U1J4 Mir6915-201ENSMUST00000198839 69 ntBASIC0.14□□□□□ -2.39
Ddb1Q3U1J4 Gm25087-201ENSMUST00000101992 78 ntBASIC0.13□□□□□ -2.39
Ddb1Q3U1J4 Gm27450-201ENSMUST00000104632 90 ntBASIC0.13□□□□□ -2.39
Ddb1Q3U1J4 Gm22962-201ENSMUST00000157962 73 ntBASIC0.13□□□□□ -2.39
Ddb1Q3U1J4 Gm26467-201ENSMUST00000097257 78 ntBASIC0.13□□□□□ -2.39
Ddb1Q3U1J4 Gm22717-201ENSMUST00000122703 171 ntBASIC0.11□□□□□ -2.39
Ddb1Q3U1J4 Gm22327-201ENSMUST00000158899 108 ntBASIC0.11□□□□□ -2.39
Ddb1Q3U1J4 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.11□□□□□ -2.39
Ddb1Q3U1J4 Mir191-201ENSMUST00000196210 74 ntBASIC0.1□□□□□ -2.39
Ddb1Q3U1J4 Gm23730-201ENSMUST00000083236 107 ntBASIC0.1□□□□□ -2.39
Ddb1Q3U1J4 Snord85-201ENSMUST00000083262 73 ntBASIC0.1□□□□□ -2.39
Ddb1Q3U1J4 Gm25510-201ENSMUST00000116986 123 ntBASIC0.09□□□□□ -2.4
Ddb1Q3U1J4 Gm23649-201ENSMUST00000179007 107 ntBASIC0.09□□□□□ -2.4
Ddb1Q3U1J4 Gm24725-201ENSMUST00000158229 125 ntBASIC0.08□□□□□ -2.4
Ddb1Q3U1J4 Gm25648-201ENSMUST00000177844 79 ntBASIC0.08□□□□□ -2.4
Ddb1Q3U1J4 Gm37832-201ENSMUST00000118935 189 ntBASIC0.07□□□□□ -2.4
Ddb1Q3U1J4 Gm22368-201ENSMUST00000102416 109 ntBASIC0.06□□□□□ -2.4
Ddb1Q3U1J4 Gm23590-201ENSMUST00000157661 104 ntBASIC0.06□□□□□ -2.4
Ddb1Q3U1J4 Gm29344-201ENSMUST00000068143 210 ntBASIC0.06□□□□□ -2.4
Ddb1Q3U1J4 Gm24927-201ENSMUST00000083397 107 ntBASIC0.06□□□□□ -2.4
Ddb1Q3U1J4 Gm22039-201ENSMUST00000157278 132 ntBASIC0.04□□□□□ -2.4
Ddb1Q3U1J4 Gm26139-201ENSMUST00000180098 107 ntBASIC0.03□□□□□ -2.4
Ddb1Q3U1J4 Gm44375-201ENSMUST00000196657 150 ntBASIC0.03□□□□□ -2.4
Ddb1Q3U1J4 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.03□□□□□ -2.4
Ddb1Q3U1J4 Gm22077-201ENSMUST00000157594 93 ntBASIC0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm45688-201ENSMUST00000210002 101 ntBASIC0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms