Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mir125b-1-201ENSMUST00000175613 77 ntBASIC1.53□□□□□ -2.16
Col9a1Q05722 Mir6995-201ENSMUST00000183658 71 ntBASIC1.53□□□□□ -2.16
Col9a1Q05722 Gm24920-201ENSMUST00000083018 85 ntBASIC1.53□□□□□ -2.16
Col9a1Q05722 Gm25049-201ENSMUST00000158597 73 ntBASIC1.52□□□□□ -2.17
Col9a1Q05722 Gm22298-201ENSMUST00000082662 133 ntBASIC1.52□□□□□ -2.17
Col9a1Q05722 Gm23494-201ENSMUST00000116830 126 ntBASIC1.51□□□□□ -2.17
Col9a1Q05722 Gm24783-201ENSMUST00000157639 100 ntBASIC1.51□□□□□ -2.17
Col9a1Q05722 Gm23558-201ENSMUST00000157823 80 ntBASIC1.51□□□□□ -2.17
Col9a1Q05722 Gm27493-201ENSMUST00000184128 78 ntBASIC1.51□□□□□ -2.17
Col9a1Q05722 Gm24165-201ENSMUST00000082718 128 ntBASIC1.49□□□□□ -2.17
Col9a1Q05722 Gm22056-201ENSMUST00000083386 81 ntBASIC1.49□□□□□ -2.17
Col9a1Q05722 Gm24372-201ENSMUST00000104400 110 ntBASIC1.48□□□□□ -2.17
Col9a1Q05722 Mir466f-1-201ENSMUST00000104779 94 ntBASIC1.48□□□□□ -2.17
Col9a1Q05722 Mir669m-2-201ENSMUST00000158355 98 ntBASIC1.48□□□□□ -2.17
Col9a1Q05722 Mir200a-201ENSMUST00000083466 90 ntBASIC1.48□□□□□ -2.17
Col9a1Q05722 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col9a1Q05722 Gm44962-201ENSMUST00000206460 279 ntBASIC1.47□□□□□ -2.17
Col9a1Q05722 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.47□□□□□ -2.17
Col9a1Q05722 Gm42845-201ENSMUST00000197766 105 ntBASIC1.46□□□□□ -2.18
Col9a1Q05722 Gm22303-201ENSMUST00000082686 122 ntBASIC1.46□□□□□ -2.18
Col9a1Q05722 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col9a1Q05722 Gm25275-201ENSMUST00000104297 129 ntBASIC1.45□□□□□ -2.18
Col9a1Q05722 Snora62-201ENSMUST00000082991 149 ntBASIC1.45□□□□□ -2.18
Col9a1Q05722 Gm23321-201ENSMUST00000104465 126 ntBASIC1.44□□□□□ -2.18
Col9a1Q05722 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.44□□□□□ -2.18
Col9a1Q05722 Mir33-201ENSMUST00000083531 69 ntBASIC1.44□□□□□ -2.18
Col9a1Q05722 Gm13577-201ENSMUST00000121365 205 ntBASIC1.43□□□□□ -2.18
Col9a1Q05722 Gm23994-201ENSMUST00000158059 88 ntBASIC1.43□□□□□ -2.18
Col9a1Q05722 Gm20386-201ENSMUST00000174010 132 ntBASIC1.43□□□□□ -2.18
Col9a1Q05722 Gm23893-201ENSMUST00000158106 134 ntBASIC1.42□□□□□ -2.18
Col9a1Q05722 Gm44345-201ENSMUST00000199560 135 ntBASIC1.42□□□□□ -2.18
Col9a1Q05722 Gm44455-201ENSMUST00000200061 82 ntBASIC1.42□□□□□ -2.18
Col9a1Q05722 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Col9a1Q05722 Gm22925-201ENSMUST00000174956 102 ntBASIC1.41□□□□□ -2.18
Col9a1Q05722 AC161271.1-201ENSMUST00000226914 150 ntBASIC1.41□□□□□ -2.18
Col9a1Q05722 Gm24174-201ENSMUST00000158933 111 ntBASIC1.4□□□□□ -2.19
Col9a1Q05722 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col9a1Q05722 Gm22455-201ENSMUST00000082580 71 ntBASIC1.39□□□□□ -2.19
Col9a1Q05722 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col9a1Q05722 Gm23173-201ENSMUST00000157161 160 ntBASIC1.38□□□□□ -2.19
Col9a1Q05722 DQ267101-201ENSMUST00000082562 73 ntBASIC1.38□□□□□ -2.19
Col9a1Q05722 Gm22603-201ENSMUST00000157603 96 ntBASIC1.36□□□□□ -2.19
Col9a1Q05722 Snord13-201ENSMUST00000157627 104 ntBASIC1.36□□□□□ -2.19
Col9a1Q05722 Gm23278-201ENSMUST00000157911 143 ntBASIC1.36□□□□□ -2.19
Col9a1Q05722 Gm23245-201ENSMUST00000083370 135 ntBASIC1.36□□□□□ -2.19
Col9a1Q05722 Snord67-201ENSMUST00000104033 111 ntBASIC1.35□□□□□ -2.19
Col9a1Q05722 Gm44303-201ENSMUST00000196348 83 ntBASIC1.35□□□□□ -2.19
Col9a1Q05722 Gm24278-201ENSMUST00000104239 127 ntBASIC1.34□□□□□ -2.19
Col9a1Q05722 Gm27974-201ENSMUST00000183415 105 ntBASIC1.34□□□□□ -2.19
Col9a1Q05722 Mir7063-201ENSMUST00000184158 91 ntBASIC1.34□□□□□ -2.19
Col9a1Q05722 Gm25791-201ENSMUST00000083292 137 ntBASIC1.34□□□□□ -2.19
Col9a1Q05722 Mir6364-201ENSMUST00000183396 86 ntBASIC1.33□□□□□ -2.2
Col9a1Q05722 Gm25108-201ENSMUST00000122473 78 ntBASIC1.31□□□□□ -2.2
Col9a1Q05722 Gm27248-201ENSMUST00000184004 166 ntBASIC1.31□□□□□ -2.2
Col9a1Q05722 Snord32a-201ENSMUST00000083285 83 ntBASIC1.31□□□□□ -2.2
Col9a1Q05722 Mir3105-201ENSMUST00000175480 85 ntBASIC1.3□□□□□ -2.2
Col9a1Q05722 Mir27b-201ENSMUST00000083541 73 ntBASIC1.3□□□□□ -2.2
Col9a1Q05722 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Col9a1Q05722 Gm26484-201ENSMUST00000158018 106 ntBASIC1.29□□□□□ -2.2
Col9a1Q05722 Gm24678-201ENSMUST00000158756 104 ntBASIC1.29□□□□□ -2.2
Col9a1Q05722 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Col9a1Q05722 AC154832.1-201ENSMUST00000228928 141 ntBASIC1.29□□□□□ -2.2
Col9a1Q05722 Gm24884-201ENSMUST00000158784 119 ntBASIC1.28□□□□□ -2.2
Col9a1Q05722 Gm23992-201ENSMUST00000174981 67 ntBASIC1.28□□□□□ -2.2
Col9a1Q05722 Gm25378-201ENSMUST00000104333 129 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Gm25885-201ENSMUST00000157779 109 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Mir6389-201ENSMUST00000183661 102 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Mir6351-201ENSMUST00000183826 99 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Mir7229-201ENSMUST00000197062 53 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Gm44483-201ENSMUST00000197203 97 ntBASIC1.27□□□□□ -2.21
Col9a1Q05722 Snord58b-201ENSMUST00000082937 66 ntBASIC1.26□□□□□ -2.21
Col9a1Q05722 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col9a1Q05722 Mir297b-201ENSMUST00000102268 109 ntBASIC1.25□□□□□ -2.21
Col9a1Q05722 Gm24097-201ENSMUST00000178720 107 ntBASIC1.25□□□□□ -2.21
Col9a1Q05722 Gm23531-201ENSMUST00000104567 68 ntBASIC1.23□□□□□ -2.21
Col9a1Q05722 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.23□□□□□ -2.21
Col9a1Q05722 Gm23221-201ENSMUST00000158118 93 ntBASIC1.22□□□□□ -2.21
Col9a1Q05722 Mir6896-201ENSMUST00000198033 73 ntBASIC1.22□□□□□ -2.21
Col9a1Q05722 Snord35a-201ENSMUST00000083884 90 ntBASIC1.22□□□□□ -2.21
Col9a1Q05722 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Col9a1Q05722 Gm22088-201ENSMUST00000158341 117 ntBASIC1.21□□□□□ -2.22
Col9a1Q05722 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Col9a1Q05722 Mir695-201ENSMUST00000102261 109 ntBASIC1.19□□□□□ -2.22
Col9a1Q05722 Gm24793-201ENSMUST00000104289 132 ntBASIC1.19□□□□□ -2.22
Col9a1Q05722 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col9a1Q05722 Gm23811-201ENSMUST00000175155 84 ntBASIC1.19□□□□□ -2.22
Col9a1Q05722 Mir211-201ENSMUST00000083651 106 ntBASIC1.19□□□□□ -2.22
Col9a1Q05722 Gm22559-201ENSMUST00000157329 134 ntBASIC1.18□□□□□ -2.22
Col9a1Q05722 Gm25903-201ENSMUST00000158492 103 ntBASIC1.18□□□□□ -2.22
Col9a1Q05722 Gm24895-201ENSMUST00000122742 74 ntBASIC1.17□□□□□ -2.22
Col9a1Q05722 Mir670-201ENSMUST00000102380 100 ntBASIC1.16□□□□□ -2.22
Col9a1Q05722 Gm25408-201ENSMUST00000104104 133 ntBASIC1.16□□□□□ -2.22
Col9a1Q05722 Mir295-201ENSMUST00000104694 69 ntBASIC1.16□□□□□ -2.22
Col9a1Q05722 Mir7681-201ENSMUST00000184834 72 ntBASIC1.16□□□□□ -2.22
Col9a1Q05722 Gm23240-201ENSMUST00000083009 121 ntBASIC1.16□□□□□ -2.22
Col9a1Q05722 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Col9a1Q05722 Gm24387-201ENSMUST00000104625 90 ntBASIC1.15□□□□□ -2.23
Col9a1Q05722 Gm25158-201ENSMUST00000177681 121 ntBASIC1.15□□□□□ -2.23
Col9a1Q05722 Gm26229-201ENSMUST00000179699 121 ntBASIC1.15□□□□□ -2.23
Col9a1Q05722 Gm44803-201ENSMUST00000204384 156 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 171.4 ms