Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Mir343-201ENSMUST00000102360 75 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Gm23328-201ENSMUST00000157418 132 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Gm22565-201ENSMUST00000175540 69 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Gm25936-201ENSMUST00000179952 114 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Gm27248-201ENSMUST00000184004 166 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Gm45754-201ENSMUST00000212380 279 ntBASIC1.6□□□□□ -2.15
Smpd1Q04519 Mir653-201ENSMUST00000102402 85 ntBASIC1.59□□□□□ -2.15
Smpd1Q04519 Gm23607-201ENSMUST00000104550 126 ntBASIC1.59□□□□□ -2.15
Smpd1Q04519 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Smpd1Q04519 Gm23811-201ENSMUST00000175155 84 ntBASIC1.58□□□□□ -2.16
Smpd1Q04519 Mir466q-201ENSMUST00000175249 76 ntBASIC1.58□□□□□ -2.16
Smpd1Q04519 Gm22303-201ENSMUST00000082686 122 ntBASIC1.58□□□□□ -2.16
Smpd1Q04519 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Smpd1Q04519 Gm25541-201ENSMUST00000116888 126 ntBASIC1.57□□□□□ -2.16
Smpd1Q04519 Gm22157-201ENSMUST00000158410 104 ntBASIC1.57□□□□□ -2.16
Smpd1Q04519 Gm44455-201ENSMUST00000200061 82 ntBASIC1.57□□□□□ -2.16
Smpd1Q04519 Mir6351-201ENSMUST00000183826 99 ntBASIC1.56□□□□□ -2.16
Smpd1Q04519 Mir7681-201ENSMUST00000184834 72 ntBASIC1.56□□□□□ -2.16
Smpd1Q04519 Gm24445-201ENSMUST00000083981 107 ntBASIC1.56□□□□□ -2.16
Smpd1Q04519 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Smpd1Q04519 Gm25408-201ENSMUST00000104104 133 ntBASIC1.55□□□□□ -2.16
Smpd1Q04519 Gm25862-201ENSMUST00000158250 129 ntBASIC1.55□□□□□ -2.16
Smpd1Q04519 Mir873a-201ENSMUST00000104863 77 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Gm24262-201ENSMUST00000157431 144 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Gm22233-201ENSMUST00000157464 114 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Gm25868-201ENSMUST00000158253 114 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Gm24222-201ENSMUST00000158834 93 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Gm42533-201ENSMUST00000196247 157 ntBASIC1.54□□□□□ -2.16
Smpd1Q04519 Traj60-201ENSMUST00000167781 54 ntBASIC1.53□□□□□ -2.16
Smpd1Q04519 Gm22239-201ENSMUST00000175220 103 ntBASIC1.53□□□□□ -2.16
Smpd1Q04519 Gm44345-201ENSMUST00000199560 135 ntBASIC1.53□□□□□ -2.16
Smpd1Q04519 Gm24387-201ENSMUST00000104625 90 ntBASIC1.52□□□□□ -2.17
Smpd1Q04519 Gm22335-201ENSMUST00000157724 99 ntBASIC1.52□□□□□ -2.17
Smpd1Q04519 Mir669f-201ENSMUST00000103850 121 ntBASIC1.51□□□□□ -2.17
Smpd1Q04519 Mir15a-201ENSMUST00000175266 84 ntBASIC1.51□□□□□ -2.17
Smpd1Q04519 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Smpd1Q04519 Mir702-201ENSMUST00000102285 109 ntBASIC1.5□□□□□ -2.17
Smpd1Q04519 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.5□□□□□ -2.17
Smpd1Q04519 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Smpd1Q04519 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.48□□□□□ -2.17
Smpd1Q04519 Gm25128-201ENSMUST00000083339 76 ntBASIC1.48□□□□□ -2.17
Smpd1Q04519 Mir200a-201ENSMUST00000083466 90 ntBASIC1.48□□□□□ -2.17
Smpd1Q04519 Mir7063-201ENSMUST00000184158 91 ntBASIC1.47□□□□□ -2.17
Smpd1Q04519 Mir7079-201ENSMUST00000184697 69 ntBASIC1.47□□□□□ -2.17
Smpd1Q04519 Mir101a-201ENSMUST00000083517 83 ntBASIC1.47□□□□□ -2.17
Smpd1Q04519 Mir363-201ENSMUST00000093598 75 ntBASIC1.47□□□□□ -2.17
Smpd1Q04519 Gm22780-201ENSMUST00000104084 132 ntBASIC1.46□□□□□ -2.18
Smpd1Q04519 Gm26484-201ENSMUST00000158018 106 ntBASIC1.46□□□□□ -2.18
Smpd1Q04519 Gm23221-201ENSMUST00000158118 93 ntBASIC1.45□□□□□ -2.18
Smpd1Q04519 Gm23315-201ENSMUST00000158003 109 ntBASIC1.43□□□□□ -2.18
Smpd1Q04519 Gm24884-201ENSMUST00000158784 119 ntBASIC1.43□□□□□ -2.18
Smpd1Q04519 Gm23636-201ENSMUST00000175070 95 ntBASIC1.43□□□□□ -2.18
Smpd1Q04519 Gm22340-201ENSMUST00000157717 114 ntBASIC1.42□□□□□ -2.18
Smpd1Q04519 Mir3105-201ENSMUST00000175480 85 ntBASIC1.42□□□□□ -2.18
Smpd1Q04519 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Smpd1Q04519 Mir10b-201ENSMUST00000083566 68 ntBASIC1.41□□□□□ -2.18
Smpd1Q04519 Gm23783-201ENSMUST00000157941 102 ntBASIC1.4□□□□□ -2.19
Smpd1Q04519 Gm25166-201ENSMUST00000158909 111 ntBASIC1.4□□□□□ -2.19
Smpd1Q04519 Mir6364-201ENSMUST00000183396 86 ntBASIC1.4□□□□□ -2.19
Smpd1Q04519 Mir196b-201ENSMUST00000083509 85 ntBASIC1.4□□□□□ -2.19
Smpd1Q04519 Mir211-201ENSMUST00000083651 106 ntBASIC1.4□□□□□ -2.19
Smpd1Q04519 Gm27784-201ENSMUST00000184926 113 ntBASIC1.39□□□□□ -2.19
Smpd1Q04519 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Smpd1Q04519 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.38□□□□□ -2.19
Smpd1Q04519 Gm24895-201ENSMUST00000122742 74 ntBASIC1.38□□□□□ -2.19
Smpd1Q04519 Gm44962-201ENSMUST00000206460 279 ntBASIC1.38□□□□□ -2.19
Smpd1Q04519 Gm24252-201ENSMUST00000083700 132 ntBASIC1.38□□□□□ -2.19
Smpd1Q04519 Mir7229-201ENSMUST00000197062 53 ntBASIC1.37□□□□□ -2.19
Smpd1Q04519 Gm44347-201ENSMUST00000199602 108 ntBASIC1.37□□□□□ -2.19
Smpd1Q04519 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Smpd1Q04519 Gm24258-201ENSMUST00000083739 133 ntBASIC1.34□□□□□ -2.19
Smpd1Q04519 Snord13-201ENSMUST00000157627 104 ntBASIC1.33□□□□□ -2.2
Smpd1Q04519 Gm25995-201ENSMUST00000175396 142 ntBASIC1.32□□□□□ -2.2
Smpd1Q04519 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Smpd1Q04519 Gm27974-201ENSMUST00000183415 105 ntBASIC1.31□□□□□ -2.2
Smpd1Q04519 Gm27749-201ENSMUST00000183651 125 ntBASIC1.31□□□□□ -2.2
Smpd1Q04519 Mir33-201ENSMUST00000083531 69 ntBASIC1.31□□□□□ -2.2
Smpd1Q04519 Gm38208-201ENSMUST00000192476 114 ntBASIC1.29□□□□□ -2.2
Smpd1Q04519 Gm44483-201ENSMUST00000197203 97 ntBASIC1.29□□□□□ -2.2
Smpd1Q04519 Gm44803-201ENSMUST00000204384 156 ntBASIC1.29□□□□□ -2.2
Smpd1Q04519 Gm23909-201ENSMUST00000104598 131 ntBASIC1.28□□□□□ -2.2
Smpd1Q04519 DQ267101-201ENSMUST00000082562 73 ntBASIC1.28□□□□□ -2.2
Smpd1Q04519 Gm22981-201ENSMUST00000082611 75 ntBASIC1.28□□□□□ -2.2
Smpd1Q04519 Gm25495-201ENSMUST00000104431 131 ntBASIC1.27□□□□□ -2.21
Smpd1Q04519 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
Smpd1Q04519 Mir7663-201ENSMUST00000183950 61 ntBASIC1.25□□□□□ -2.21
Smpd1Q04519 Gm37750-201ENSMUST00000193563 129 ntBASIC1.25□□□□□ -2.21
Smpd1Q04519 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.25□□□□□ -2.21
Smpd1Q04519 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.25□□□□□ -2.21
Smpd1Q04519 Gm22602-201ENSMUST00000157596 95 ntBASIC1.24□□□□□ -2.21
Smpd1Q04519 Gm23126-201ENSMUST00000104260 134 ntBASIC1.23□□□□□ -2.21
Smpd1Q04519 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Smpd1Q04519 Gm25247-201ENSMUST00000175475 90 ntBASIC1.23□□□□□ -2.21
Smpd1Q04519 Mir3065-201ENSMUST00000198674 87 ntBASIC1.23□□□□□ -2.21
Smpd1Q04519 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Smpd1Q04519 Gm24579-201ENSMUST00000103964 144 ntBASIC1.22□□□□□ -2.21
Smpd1Q04519 Gm25506-201ENSMUST00000104339 70 ntBASIC1.22□□□□□ -2.21
Smpd1Q04519 Gm24865-201ENSMUST00000103246 96 ntBASIC1.21□□□□□ -2.22
Smpd1Q04519 Gm23893-201ENSMUST00000158106 134 ntBASIC1.21□□□□□ -2.22
Smpd1Q04519 Gm24678-201ENSMUST00000158756 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 227.5 ms