Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm22485-201ENSMUST00000157990 109 ntBASIC1.09□□□□□ -2.23
Msx1P13297 Gm26484-201ENSMUST00000158018 106 ntBASIC1.09□□□□□ -2.23
Msx1P13297 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Msx1P13297 Gm6607-201ENSMUST00000215035 328 ntBASIC1.08□□□□□ -2.24
Msx1P13297 Gm24884-201ENSMUST00000158784 119 ntBASIC1.07□□□□□ -2.24
Msx1P13297 Gm23893-201ENSMUST00000158106 134 ntBASIC1.06□□□□□ -2.24
Msx1P13297 Gm24297-201ENSMUST00000158300 68 ntBASIC1.06□□□□□ -2.24
Msx1P13297 Gm22357-201ENSMUST00000082882 83 ntBASIC1.06□□□□□ -2.24
Msx1P13297 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.06□□□□□ -2.24
Msx1P13297 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Msx1P13297 Gm25522-201ENSMUST00000158394 105 ntBASIC1.03□□□□□ -2.24
Msx1P13297 Gm27289-201ENSMUST00000183341 82 ntBASIC1.03□□□□□ -2.24
Msx1P13297 Mir7091-201ENSMUST00000184075 79 ntBASIC1.03□□□□□ -2.24
Msx1P13297 Gm25408-201ENSMUST00000104104 133 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Gm25378-201ENSMUST00000104333 129 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Gm24531-201ENSMUST00000157945 100 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Gm26363-201ENSMUST00000158866 83 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Gm25161-201ENSMUST00000158913 132 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Mir27b-201ENSMUST00000083541 73 ntBASIC1.02□□□□□ -2.25
Msx1P13297 Mir1904-201ENSMUST00000122702 80 ntBASIC1.01□□□□□ -2.25
Msx1P13297 Snord33-201ENSMUST00000083694 84 ntBASIC1.01□□□□□ -2.25
Msx1P13297 Gm25886-201ENSMUST00000157780 114 ntBASIC1□□□□□ -2.25
Msx1P13297 Mir6381-201ENSMUST00000183426 87 ntBASIC1□□□□□ -2.25
Msx1P13297 Gm22302-201ENSMUST00000082657 106 ntBASIC1□□□□□ -2.25
Msx1P13297 Gm22127-201ENSMUST00000083239 106 ntBASIC1□□□□□ -2.25
Msx1P13297 Gm23783-201ENSMUST00000157941 102 ntBASIC0.99□□□□□ -2.25
Msx1P13297 Mir7079-201ENSMUST00000184697 69 ntBASIC0.99□□□□□ -2.25
Msx1P13297 Gm44457-201ENSMUST00000198109 76 ntBASIC0.99□□□□□ -2.25
Msx1P13297 Gm44803-201ENSMUST00000204384 156 ntBASIC0.99□□□□□ -2.25
Msx1P13297 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.99□□□□□ -2.25
Msx1P13297 Mir363-201ENSMUST00000093598 75 ntBASIC0.99□□□□□ -2.25
Msx1P13297 Mir670-201ENSMUST00000102380 100 ntBASIC0.98□□□□□ -2.25
Msx1P13297 Gm24258-201ENSMUST00000083739 133 ntBASIC0.98□□□□□ -2.25
Msx1P13297 Mir362-201ENSMUST00000093592 65 ntBASIC0.98□□□□□ -2.25
Msx1P13297 Gm24777-201ENSMUST00000157644 107 ntBASIC0.97□□□□□ -2.25
Msx1P13297 Gm23008-201ENSMUST00000158946 80 ntBASIC0.97□□□□□ -2.25
Msx1P13297 Gm26306-201ENSMUST00000157773 119 ntBASIC0.96□□□□□ -2.26
Msx1P13297 Mir6389-201ENSMUST00000183661 102 ntBASIC0.96□□□□□ -2.26
Msx1P13297 Gm22981-201ENSMUST00000082611 75 ntBASIC0.96□□□□□ -2.26
Msx1P13297 Gm23173-201ENSMUST00000157161 160 ntBASIC0.95□□□□□ -2.26
Msx1P13297 Gm24445-201ENSMUST00000083981 107 ntBASIC0.95□□□□□ -2.26
Msx1P13297 Gm22431-201ENSMUST00000158545 107 ntBASIC0.94□□□□□ -2.26
Msx1P13297 Gm24020-201ENSMUST00000180156 108 ntBASIC0.94□□□□□ -2.26
Msx1P13297 Mir22-201ENSMUST00000083595 95 ntBASIC0.94□□□□□ -2.26
Msx1P13297 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.93□□□□□ -2.26
Msx1P13297 Gm25779-201ENSMUST00000116710 95 ntBASIC0.92□□□□□ -2.26
Msx1P13297 Gm24579-201ENSMUST00000103964 144 ntBASIC0.91□□□□□ -2.26
Msx1P13297 Gm23126-201ENSMUST00000104260 134 ntBASIC0.91□□□□□ -2.26
Msx1P13297 Mir7065-201ENSMUST00000185110 61 ntBASIC0.91□□□□□ -2.26
Msx1P13297 Mir3065-201ENSMUST00000198674 87 ntBASIC0.91□□□□□ -2.26
Msx1P13297 Mir6380-201ENSMUST00000184334 81 ntBASIC0.9□□□□□ -2.27
Msx1P13297 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.9□□□□□ -2.27
Msx1P13297 Mir18-201ENSMUST00000083469 96 ntBASIC0.9□□□□□ -2.27
Msx1P13297 Gm23787-201ENSMUST00000122538 73 ntBASIC0.89□□□□□ -2.27
Msx1P13297 Gm24431-201ENSMUST00000104073 66 ntBASIC0.88□□□□□ -2.27
Msx1P13297 Gm22340-201ENSMUST00000157717 114 ntBASIC0.88□□□□□ -2.27
Msx1P13297 Mir219b-201ENSMUST00000198317 65 ntBASIC0.88□□□□□ -2.27
Msx1P13297 Gm25683-201ENSMUST00000083940 131 ntBASIC0.88□□□□□ -2.27
Msx1P13297 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Msx1P13297 Gm13577-201ENSMUST00000121365 205 ntBASIC0.87□□□□□ -2.27
Msx1P13297 Gm23969-201ENSMUST00000083324 74 ntBASIC0.85□□□□□ -2.27
Msx1P13297 Gm22239-201ENSMUST00000175220 103 ntBASIC0.84□□□□□ -2.27
Msx1P13297 Gm37750-201ENSMUST00000193563 129 ntBASIC0.84□□□□□ -2.27
Msx1P13297 Gm45617-201ENSMUST00000211132 209 ntBASIC0.84□□□□□ -2.27
Msx1P13297 Mir142b-201ENSMUST00000083486 115 ntBASIC0.84□□□□□ -2.27
Msx1P13297 Gm23321-201ENSMUST00000104465 126 ntBASIC0.83□□□□□ -2.28
Msx1P13297 Gm25247-201ENSMUST00000175475 90 ntBASIC0.83□□□□□ -2.28
Msx1P13297 Gm22879-201ENSMUST00000082895 74 ntBASIC0.82□□□□□ -2.28
Msx1P13297 Gm27798-201ENSMUST00000184989 71 ntBASIC0.81□□□□□ -2.28
Msx1P13297 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Msx1P13297 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Msx1P13297 Gm24772-201ENSMUST00000158507 110 ntBASIC0.8□□□□□ -2.28
Msx1P13297 Mir224-201ENSMUST00000083608 82 ntBASIC0.8□□□□□ -2.28
Msx1P13297 Mir1955-201ENSMUST00000158014 98 ntBASIC0.79□□□□□ -2.28
Msx1P13297 Gm24323-201ENSMUST00000175342 77 ntBASIC0.79□□□□□ -2.28
Msx1P13297 Gm45541-201ENSMUST00000210443 54 ntBASIC0.79□□□□□ -2.28
Msx1P13297 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.78□□□□□ -2.28
Msx1P13297 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.78□□□□□ -2.28
Msx1P13297 Gm37832-201ENSMUST00000118935 189 ntBASIC0.77□□□□□ -2.29
Msx1P13297 Mir3109-201ENSMUST00000175301 88 ntBASIC0.76□□□□□ -2.29
Msx1P13297 Gm23240-201ENSMUST00000083009 121 ntBASIC0.76□□□□□ -2.29
Msx1P13297 Gm22157-201ENSMUST00000158410 104 ntBASIC0.75□□□□□ -2.29
Msx1P13297 Gm24963-201ENSMUST00000157916 144 ntBASIC0.74□□□□□ -2.29
Msx1P13297 Gm22689-201ENSMUST00000102452 110 ntBASIC0.73□□□□□ -2.29
Msx1P13297 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
Msx1P13297 Gm38208-201ENSMUST00000192476 114 ntBASIC0.72□□□□□ -2.29
Msx1P13297 Gm24459-201ENSMUST00000082730 86 ntBASIC0.72□□□□□ -2.29
Msx1P13297 Gm27607-201ENSMUST00000185162 122 ntBASIC0.71□□□□□ -2.3
Msx1P13297 Gm38113-201ENSMUST00000193704 201 ntBASIC0.71□□□□□ -2.3
Msx1P13297 Gm27749-201ENSMUST00000183651 125 ntBASIC0.7□□□□□ -2.3
Msx1P13297 Gm23735-201ENSMUST00000082551 134 ntBASIC0.7□□□□□ -2.3
Msx1P13297 Gm22335-201ENSMUST00000157724 99 ntBASIC0.69□□□□□ -2.3
Msx1P13297 Gm22838-201ENSMUST00000158437 99 ntBASIC0.69□□□□□ -2.3
Msx1P13297 Mir1948-201ENSMUST00000157325 85 ntBASIC0.68□□□□□ -2.3
Msx1P13297 Gm25158-201ENSMUST00000177681 121 ntBASIC0.68□□□□□ -2.3
Msx1P13297 Gm26229-201ENSMUST00000179699 121 ntBASIC0.68□□□□□ -2.3
Msx1P13297 Gm22301-201ENSMUST00000082656 107 ntBASIC0.68□□□□□ -2.3
Msx1P13297 Gm25375-201ENSMUST00000158157 135 ntBASIC0.67□□□□□ -2.3
Msx1P13297 Gm26285-201ENSMUST00000177923 107 ntBASIC0.67□□□□□ -2.3
Msx1P13297 Gm23622-201ENSMUST00000082460 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 258.2 ms