Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm25449-201ENSMUST00000179389 79 ntBASIC-1.64□□□□□ -2.67
Lire1P11260 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.64□□□□□ -2.67
Lire1P11260 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.65□□□□□ -2.67
Lire1P11260 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.65□□□□□ -2.67
Lire1P11260 mt-Tv-201ENSMUST00000082389 69 ntBASIC-1.65□□□□□ -2.67
Lire1P11260 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.67□□□□□ -2.68
Lire1P11260 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.67□□□□□ -2.68
Lire1P11260 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.67□□□□□ -2.68
Lire1P11260 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.67□□□□□ -2.68
Lire1P11260 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm23988-201ENSMUST00000117034 122 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24001-201ENSMUST00000158463 85 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25098-201ENSMUST00000177580 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm23356-201ENSMUST00000177610 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24027-201ENSMUST00000177611 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22511-201ENSMUST00000177628 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22630-201ENSMUST00000177781 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm23560-201ENSMUST00000177782 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25462-201ENSMUST00000177833 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm26059-201ENSMUST00000177865 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22255-201ENSMUST00000177933 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25146-201ENSMUST00000177976 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25523-201ENSMUST00000178044 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24585-201ENSMUST00000178104 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22627-201ENSMUST00000178127 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22912-201ENSMUST00000178242 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24866-201ENSMUST00000178338 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22524-201ENSMUST00000178357 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25710-201ENSMUST00000178367 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm23575-201ENSMUST00000178406 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24872-201ENSMUST00000178434 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22449-201ENSMUST00000178924 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24702-201ENSMUST00000178965 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24206-201ENSMUST00000179011 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24528-201ENSMUST00000179164 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22909-201ENSMUST00000179190 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm26334-201ENSMUST00000179403 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25463-201ENSMUST00000179405 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25742-201ENSMUST00000179530 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25209-201ENSMUST00000179576 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm26392-201ENSMUST00000179661 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25230-201ENSMUST00000179740 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm26434-201ENSMUST00000179778 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm25741-201ENSMUST00000179825 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24759-201ENSMUST00000179827 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm24219-201ENSMUST00000179861 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Mir494-201ENSMUST00000093632 85 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm23254-201ENSMUST00000097244 79 ntBASIC-1.69□□□□□ -2.68
Lire1P11260 Gm22384-201ENSMUST00000158187 104 ntBASIC-1.7□□□□□ -2.68
Lire1P11260 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.7□□□□□ -2.68
Lire1P11260 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.7□□□□□ -2.68
Lire1P11260 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.71□□□□□ -2.68
Lire1P11260 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.71□□□□□ -2.68
Lire1P11260 Gm22490-201ENSMUST00000157188 119 ntBASIC-1.71□□□□□ -2.68
Lire1P11260 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.71□□□□□ -2.68
Lire1P11260 Gm22195-201ENSMUST00000116861 108 ntBASIC-1.72□□□□□ -2.68
Lire1P11260 Mir467g-201ENSMUST00000116906 120 ntBASIC-1.72□□□□□ -2.68
Lire1P11260 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.72□□□□□ -2.68
Lire1P11260 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.72□□□□□ -2.68
Lire1P11260 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.72□□□□□ -2.68
Lire1P11260 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.74□□□□□ -2.69
Lire1P11260 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.74□□□□□ -2.69
Lire1P11260 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
Lire1P11260 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
Lire1P11260 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.74□□□□□ -2.69
Lire1P11260 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.74□□□□□ -2.69
Lire1P11260 Mir466-201ENSMUST00000093591 73 ntBASIC-1.74□□□□□ -2.69
Lire1P11260 Gm24590-201ENSMUST00000116699 119 ntBASIC-1.75□□□□□ -2.69
Lire1P11260 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.75□□□□□ -2.69
Lire1P11260 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.75□□□□□ -2.69
Lire1P11260 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.76□□□□□ -2.69
Lire1P11260 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.76□□□□□ -2.69
Lire1P11260 Gm44353-201ENSMUST00000200618 138 ntBASIC-1.76□□□□□ -2.69
Lire1P11260 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.76□□□□□ -2.69
Lire1P11260 Gm23044-201ENSMUST00000157891 100 ntBASIC-1.77□□□□□ -2.69
Lire1P11260 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.77□□□□□ -2.69
Lire1P11260 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.78□□□□□ -2.69
Lire1P11260 Gm22911-201ENSMUST00000177920 107 ntBASIC-1.78□□□□□ -2.69
Lire1P11260 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.78□□□□□ -2.69
Lire1P11260 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.79□□□□□ -2.7
Lire1P11260 Mir122-201ENSMUST00000083468 66 ntBASIC-1.79□□□□□ -2.7
Lire1P11260 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.79□□□□□ -2.7
Lire1P11260 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.8□□□□□ -2.7
Lire1P11260 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.8□□□□□ -2.7
Lire1P11260 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.8□□□□□ -2.7
Lire1P11260 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.81□□□□□ -2.7
Lire1P11260 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Lire1P11260 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.82□□□□□ -2.7
Lire1P11260 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.83□□□□□ -2.7
Lire1P11260 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.83□□□□□ -2.7
Lire1P11260 Gm25920-201ENSMUST00000158307 99 ntBASIC-1.84□□□□□ -2.7
Lire1P11260 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.84□□□□□ -2.7
Lire1P11260 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.85□□□□□ -2.71
Lire1P11260 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.85□□□□□ -2.71
Lire1P11260 Mir7116-201ENSMUST00000195956 70 ntBASIC-1.86□□□□□ -2.71
Lire1P11260 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.88□□□□□ -2.71
Lire1P11260 Gm24683-201ENSMUST00000104840 88 ntBASIC-1.88□□□□□ -2.71
Lire1P11260 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms