Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm24400-201ENSMUST00000157865 107 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Gm22542-201ENSMUST00000158166 95 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Mir200a-201ENSMUST00000083466 90 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Gm25993-201ENSMUST00000175391 80 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Gm44455-201ENSMUST00000200061 82 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 DQ267101-201ENSMUST00000082562 73 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Gm22720-201ENSMUST00000122710 87 ntBASIC0.6□□□□□ -2.31
Col3a1P08121 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.6□□□□□ -2.31
Col3a1P08121 Mir7231-201ENSMUST00000196252 61 ntBASIC0.59□□□□□ -2.32
Col3a1P08121 Gm45125-201ENSMUST00000206908 151 ntBASIC0.59□□□□□ -2.32
Col3a1P08121 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.59□□□□□ -2.32
Col3a1P08121 Gm25296-201ENSMUST00000082566 67 ntBASIC0.59□□□□□ -2.32
Col3a1P08121 Mir224-201ENSMUST00000083608 82 ntBASIC0.59□□□□□ -2.32
Col3a1P08121 Gm43432-201ENSMUST00000196352 121 ntBASIC0.58□□□□□ -2.32
Col3a1P08121 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.58□□□□□ -2.32
Col3a1P08121 Mir717-201ENSMUST00000102259 109 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm23749-201ENSMUST00000104223 131 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm24996-201ENSMUST00000158390 99 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm22165-201ENSMUST00000158414 103 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm45688-201ENSMUST00000210002 101 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm25802-201ENSMUST00000082639 77 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm22303-201ENSMUST00000082686 122 ntBASIC0.57□□□□□ -2.32
Col3a1P08121 Gm22757-201ENSMUST00000102279 96 ntBASIC0.56□□□□□ -2.32
Col3a1P08121 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Col3a1P08121 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Col3a1P08121 Gm22965-201ENSMUST00000157958 101 ntBASIC0.56□□□□□ -2.32
Col3a1P08121 Gm26007-201ENSMUST00000158798 120 ntBASIC0.56□□□□□ -2.32
Col3a1P08121 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.56□□□□□ -2.32
Col3a1P08121 Gm24678-201ENSMUST00000158756 104 ntBASIC0.55□□□□□ -2.32
Col3a1P08121 Gm22401-201ENSMUST00000174927 117 ntBASIC0.55□□□□□ -2.32
Col3a1P08121 Gm24278-201ENSMUST00000104239 127 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm24797-201ENSMUST00000178103 107 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm27263-201ENSMUST00000184760 76 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm44345-201ENSMUST00000199560 135 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Mir23a-201ENSMUST00000083677 75 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm24259-201ENSMUST00000083740 107 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Mir695-201ENSMUST00000102261 109 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm23630-201ENSMUST00000175292 104 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Mir6364-201ENSMUST00000183396 86 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm42845-201ENSMUST00000197766 105 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Snord57-201ENSMUST00000083338 72 ntBASIC0.54□□□□□ -2.32
Col3a1P08121 Gm26375-201ENSMUST00000101829 106 ntBASIC0.53□□□□□ -2.33
Col3a1P08121 Gm25087-201ENSMUST00000101992 78 ntBASIC0.53□□□□□ -2.33
Col3a1P08121 Gm24796-201ENSMUST00000104007 107 ntBASIC0.53□□□□□ -2.33
Col3a1P08121 Gm26467-201ENSMUST00000097257 78 ntBASIC0.53□□□□□ -2.33
Col3a1P08121 Gm24047-201ENSMUST00000102405 104 ntBASIC0.52□□□□□ -2.33
Col3a1P08121 Gm23494-201ENSMUST00000116830 126 ntBASIC0.52□□□□□ -2.33
Col3a1P08121 Gm22016-201ENSMUST00000158793 114 ntBASIC0.52□□□□□ -2.33
Col3a1P08121 Mir7229-201ENSMUST00000197062 53 ntBASIC0.52□□□□□ -2.33
Col3a1P08121 Gm44828-201ENSMUST00000203745 106 ntBASIC0.52□□□□□ -2.33
Col3a1P08121 Gm22489-201ENSMUST00000116813 62 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Gm25772-201ENSMUST00000158574 56 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Mir3105-201ENSMUST00000175480 85 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Mir6896-201ENSMUST00000198033 73 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Snora62-201ENSMUST00000082991 149 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Gm23969-201ENSMUST00000083324 74 ntBASIC0.51□□□□□ -2.33
Col3a1P08121 Gm22759-201ENSMUST00000102276 96 ntBASIC0.5□□□□□ -2.33
Col3a1P08121 Gm23017-201ENSMUST00000177583 72 ntBASIC0.5□□□□□ -2.33
Col3a1P08121 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.5□□□□□ -2.33
Col3a1P08121 Gm25275-201ENSMUST00000104297 129 ntBASIC0.49□□□□□ -2.33
Col3a1P08121 Gm24723-201ENSMUST00000158233 132 ntBASIC0.49□□□□□ -2.33
Col3a1P08121 Gm22474-201ENSMUST00000179407 107 ntBASIC0.49□□□□□ -2.33
Col3a1P08121 Gm22455-201ENSMUST00000082580 71 ntBASIC0.49□□□□□ -2.33
Col3a1P08121 Mir216a-201ENSMUST00000083605 72 ntBASIC0.49□□□□□ -2.33
Col3a1P08121 Gm24884-201ENSMUST00000158784 119 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm26116-201ENSMUST00000175600 77 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm22746-201ENSMUST00000082494 107 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Mir362-201ENSMUST00000093592 65 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Snord67-201ENSMUST00000104033 111 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm26484-201ENSMUST00000158018 106 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm24508-201ENSMUST00000180104 107 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm22298-201ENSMUST00000082662 133 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Snord33-201ENSMUST00000083694 84 ntBASIC0.48□□□□□ -2.33
Col3a1P08121 Gm27289-201ENSMUST00000183341 82 ntBASIC0.47□□□□□ -2.33
Col3a1P08121 Gm25408-201ENSMUST00000104104 133 ntBASIC0.46□□□□□ -2.34
Col3a1P08121 Mir3089-201ENSMUST00000175350 84 ntBASIC0.45□□□□□ -2.34
Col3a1P08121 Gm44457-201ENSMUST00000198109 76 ntBASIC0.45□□□□□ -2.34
Col3a1P08121 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.45□□□□□ -2.34
Col3a1P08121 Mir670-201ENSMUST00000102380 100 ntBASIC0.44□□□□□ -2.34
Col3a1P08121 Gm22981-201ENSMUST00000082611 75 ntBASIC0.44□□□□□ -2.34
Col3a1P08121 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.44□□□□□ -2.34
Col3a1P08121 Gm25326-201ENSMUST00000101903 107 ntBASIC0.43□□□□□ -2.34
Col3a1P08121 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.43□□□□□ -2.34
Col3a1P08121 Mir7065-201ENSMUST00000185110 61 ntBASIC0.43□□□□□ -2.34
Col3a1P08121 Gm44803-201ENSMUST00000204384 156 ntBASIC0.43□□□□□ -2.34
Col3a1P08121 Mir3065-201ENSMUST00000198674 87 ntBASIC0.42□□□□□ -2.34
Col3a1P08121 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.42□□□□□ -2.34
Col3a1P08121 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.42□□□□□ -2.34
Col3a1P08121 Mir710-201ENSMUST00000102088 110 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 Gm23573-201ENSMUST00000104408 107 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 Gm24963-201ENSMUST00000157916 144 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 Gm24710-201ENSMUST00000175235 101 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 Gm24135-201ENSMUST00000179085 101 ntBASIC0.41□□□□□ -2.34
Col3a1P08121 Mir18-201ENSMUST00000083469 96 ntBASIC0.4□□□□□ -2.35
Col3a1P08121 Mir363-201ENSMUST00000093598 75 ntBASIC0.4□□□□□ -2.35
Col3a1P08121 Gm23955-201ENSMUST00000157214 100 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms