Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Mir23a-201ENSMUST00000083677 75 ntBASIC0.64□□□□□ -2.31
Ccdc9bA3KGF9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.64□□□□□ -2.31
Ccdc9bA3KGF9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.63□□□□□ -2.31
Ccdc9bA3KGF9 Gm22595-201ENSMUST00000104250 130 ntBASIC0.62□□□□□ -2.31
Ccdc9bA3KGF9 Gm25183-201ENSMUST00000157752 106 ntBASIC0.62□□□□□ -2.31
Ccdc9bA3KGF9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.62□□□□□ -2.31
Ccdc9bA3KGF9 Gm22165-201ENSMUST00000158414 103 ntBASIC0.62□□□□□ -2.31
Ccdc9bA3KGF9 Gm25648-201ENSMUST00000177844 79 ntBASIC0.62□□□□□ -2.31
Ccdc9bA3KGF9 Mir717-201ENSMUST00000102259 109 ntBASIC0.61□□□□□ -2.31
Ccdc9bA3KGF9 Gm22717-201ENSMUST00000122703 171 ntBASIC0.61□□□□□ -2.31
Ccdc9bA3KGF9 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.61□□□□□ -2.31
Ccdc9bA3KGF9 Gm24201-201ENSMUST00000082946 125 ntBASIC0.61□□□□□ -2.31
Ccdc9bA3KGF9 Gm27450-201ENSMUST00000104632 90 ntBASIC0.6□□□□□ -2.31
Ccdc9bA3KGF9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.6□□□□□ -2.31
Ccdc9bA3KGF9 Gm24226-201ENSMUST00000158826 97 ntBASIC0.6□□□□□ -2.31
Ccdc9bA3KGF9 Gm23494-201ENSMUST00000116830 126 ntBASIC0.59□□□□□ -2.31
Ccdc9bA3KGF9 Gm23072-201ENSMUST00000158243 123 ntBASIC0.59□□□□□ -2.31
Ccdc9bA3KGF9 Gm24927-201ENSMUST00000083397 107 ntBASIC0.59□□□□□ -2.31
Ccdc9bA3KGF9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.59□□□□□ -2.31
Ccdc9bA3KGF9 Gm26491-201ENSMUST00000179268 121 ntBASIC0.58□□□□□ -2.32
Ccdc9bA3KGF9 Gm29344-201ENSMUST00000068143 210 ntBASIC0.58□□□□□ -2.32
Ccdc9bA3KGF9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.57□□□□□ -2.32
Ccdc9bA3KGF9 Gm27263-201ENSMUST00000184760 76 ntBASIC0.57□□□□□ -2.32
Ccdc9bA3KGF9 Snora62-201ENSMUST00000082991 149 ntBASIC0.57□□□□□ -2.32
Ccdc9bA3KGF9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.54□□□□□ -2.32
Ccdc9bA3KGF9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.54□□□□□ -2.32
Ccdc9bA3KGF9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.54□□□□□ -2.32
Ccdc9bA3KGF9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.53□□□□□ -2.32
Ccdc9bA3KGF9 Mir363-201ENSMUST00000093598 75 ntBASIC0.53□□□□□ -2.32
Ccdc9bA3KGF9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.52□□□□□ -2.33
Ccdc9bA3KGF9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Ccdc9bA3KGF9 Gm23017-201ENSMUST00000177583 72 ntBASIC0.52□□□□□ -2.33
Ccdc9bA3KGF9 Gm25522-201ENSMUST00000158394 105 ntBASIC0.51□□□□□ -2.33
Ccdc9bA3KGF9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.51□□□□□ -2.33
Ccdc9bA3KGF9 Gm26139-201ENSMUST00000180098 107 ntBASIC0.5□□□□□ -2.33
Ccdc9bA3KGF9 Gm24612-201ENSMUST00000083267 107 ntBASIC0.5□□□□□ -2.33
Ccdc9bA3KGF9 Mir224-201ENSMUST00000083608 82 ntBASIC0.5□□□□□ -2.33
Ccdc9bA3KGF9 Mir487b-201ENSMUST00000102265 82 ntBASIC0.49□□□□□ -2.33
Ccdc9bA3KGF9 Gm37750-201ENSMUST00000193563 129 ntBASIC0.49□□□□□ -2.33
Ccdc9bA3KGF9 Gm25186-201ENSMUST00000083909 108 ntBASIC0.49□□□□□ -2.33
Ccdc9bA3KGF9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.48□□□□□ -2.33
Ccdc9bA3KGF9 Mir7231-201ENSMUST00000196252 61 ntBASIC0.48□□□□□ -2.33
Ccdc9bA3KGF9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.48□□□□□ -2.33
Ccdc9bA3KGF9 Gm22078-201ENSMUST00000157593 103 ntBASIC0.47□□□□□ -2.33
Ccdc9bA3KGF9 Gm23730-201ENSMUST00000083236 107 ntBASIC0.47□□□□□ -2.33
Ccdc9bA3KGF9 Mir141-201ENSMUST00000083540 72 ntBASIC0.47□□□□□ -2.33
Ccdc9bA3KGF9 Gm22039-201ENSMUST00000157278 132 ntBASIC0.46□□□□□ -2.34
Ccdc9bA3KGF9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.46□□□□□ -2.34
Ccdc9bA3KGF9 Scarna8-201ENSMUST00000158333 131 ntBASIC0.46□□□□□ -2.34
Ccdc9bA3KGF9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.46□□□□□ -2.34
Ccdc9bA3KGF9 Gm25802-201ENSMUST00000082639 77 ntBASIC0.45□□□□□ -2.34
Ccdc9bA3KGF9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.44□□□□□ -2.34
Ccdc9bA3KGF9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.44□□□□□ -2.34
Ccdc9bA3KGF9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.43□□□□□ -2.34
Ccdc9bA3KGF9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.42□□□□□ -2.34
Ccdc9bA3KGF9 Gm45617-201ENSMUST00000211132 209 ntBASIC0.42□□□□□ -2.34
Ccdc9bA3KGF9 Gm22298-201ENSMUST00000082662 133 ntBASIC0.42□□□□□ -2.34
Ccdc9bA3KGF9 Snord57-201ENSMUST00000083338 72 ntBASIC0.42□□□□□ -2.34
Ccdc9bA3KGF9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Ccdc9bA3KGF9 Gm25652-201ENSMUST00000083780 103 ntBASIC0.41□□□□□ -2.34
Ccdc9bA3KGF9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.4□□□□□ -2.35
Ccdc9bA3KGF9 Gm25465-201ENSMUST00000157716 105 ntBASIC0.39□□□□□ -2.35
Ccdc9bA3KGF9 Gm24725-201ENSMUST00000158229 125 ntBASIC0.39□□□□□ -2.35
Ccdc9bA3KGF9 Gm22838-201ENSMUST00000158437 99 ntBASIC0.39□□□□□ -2.35
Ccdc9bA3KGF9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.39□□□□□ -2.35
Ccdc9bA3KGF9 Gm44328-201ENSMUST00000199331 75 ntBASIC0.38□□□□□ -2.35
Ccdc9bA3KGF9 Gm25791-201ENSMUST00000083292 137 ntBASIC0.38□□□□□ -2.35
Ccdc9bA3KGF9 Gm24996-201ENSMUST00000158390 99 ntBASIC0.37□□□□□ -2.35
Ccdc9bA3KGF9 Mir8107-201ENSMUST00000184024 117 ntBASIC0.37□□□□□ -2.35
Ccdc9bA3KGF9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.36□□□□□ -2.35
Ccdc9bA3KGF9 Gm24381-201ENSMUST00000122697 104 ntBASIC0.36□□□□□ -2.35
Ccdc9bA3KGF9 Gm24793-201ENSMUST00000104289 132 ntBASIC0.35□□□□□ -2.35
Ccdc9bA3KGF9 Gm22016-201ENSMUST00000158793 114 ntBASIC0.35□□□□□ -2.35
Ccdc9bA3KGF9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.35□□□□□ -2.35
Ccdc9bA3KGF9 Mir710-201ENSMUST00000102088 110 ntBASIC0.34□□□□□ -2.36
Ccdc9bA3KGF9 Gm22965-201ENSMUST00000157958 101 ntBASIC0.34□□□□□ -2.36
Ccdc9bA3KGF9 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.33□□□□□ -2.36
Ccdc9bA3KGF9 Gm25087-201ENSMUST00000101992 78 ntBASIC0.32□□□□□ -2.36
Ccdc9bA3KGF9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.32□□□□□ -2.36
Ccdc9bA3KGF9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.32□□□□□ -2.36
Ccdc9bA3KGF9 Gm38208-201ENSMUST00000192476 114 ntBASIC0.32□□□□□ -2.36
Ccdc9bA3KGF9 Gm26467-201ENSMUST00000097257 78 ntBASIC0.32□□□□□ -2.36
Ccdc9bA3KGF9 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Ccdc9bA3KGF9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.31□□□□□ -2.36
Ccdc9bA3KGF9 Mir7651-201ENSMUST00000184154 64 ntBASIC0.31□□□□□ -2.36
Ccdc9bA3KGF9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.3□□□□□ -2.36
Ccdc9bA3KGF9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Ccdc9bA3KGF9 Gm23159-201ENSMUST00000175088 77 ntBASIC0.3□□□□□ -2.36
Ccdc9bA3KGF9 Gm24259-201ENSMUST00000083740 107 ntBASIC0.3□□□□□ -2.36
Ccdc9bA3KGF9 Gm23955-201ENSMUST00000157214 100 ntBASIC0.28□□□□□ -2.36
Ccdc9bA3KGF9 Gm24797-201ENSMUST00000178103 107 ntBASIC0.28□□□□□ -2.36
Ccdc9bA3KGF9 Gm27749-201ENSMUST00000183651 125 ntBASIC0.28□□□□□ -2.36
Ccdc9bA3KGF9 Mir181b-1-201ENSMUST00000083524 80 ntBASIC0.27□□□□□ -2.37
Ccdc9bA3KGF9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Ccdc9bA3KGF9 Gm24701-201ENSMUST00000101946 105 ntBASIC0.25□□□□□ -2.37
Ccdc9bA3KGF9 Gm23442-201ENSMUST00000082919 134 ntBASIC0.25□□□□□ -2.37
Ccdc9bA3KGF9 Gm25952-201ENSMUST00000175329 74 ntBASIC0.24□□□□□ -2.37
Ccdc9bA3KGF9 Mir6365-201ENSMUST00000183990 101 ntBASIC0.23□□□□□ -2.37
Ccdc9bA3KGF9 Gm23173-201ENSMUST00000157161 160 ntBASIC0.22□□□□□ -2.37
Ccdc9bA3KGF9 Gm24843-201ENSMUST00000158682 76 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms