Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm25894-201ENSMUST00000083458 75 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Mir3071-201ENSMUST00000093621 80 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Mir669f-201ENSMUST00000103850 121 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Gm27977-201ENSMUST00000185159 111 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Gm22431-201ENSMUST00000158545 107 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Mir33-201ENSMUST00000083531 69 ntBASIC0.74□□□□□ -2.29
Shroom3Q9QXN0 Gm22303-201ENSMUST00000082686 122 ntBASIC0.73□□□□□ -2.29
Shroom3Q9QXN0 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.72□□□□□ -2.29
Shroom3Q9QXN0 Gm25705-201ENSMUST00000083119 104 ntBASIC0.72□□□□□ -2.29
Shroom3Q9QXN0 Gm22039-201ENSMUST00000157278 132 ntBASIC0.72□□□□□ -2.29
Shroom3Q9QXN0 Gm38274-201ENSMUST00000195689 148 ntBASIC0.72□□□□□ -2.29
Shroom3Q9QXN0 Gm14533-201ENSMUST00000117088 93 ntBASIC0.71□□□□□ -2.3
Shroom3Q9QXN0 Gm23416-201ENSMUST00000175520 95 ntBASIC0.71□□□□□ -2.3
Shroom3Q9QXN0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
Shroom3Q9QXN0 Gm24278-201ENSMUST00000104239 127 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm23856-201ENSMUST00000158380 99 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm26338-201ENSMUST00000102372 110 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm44345-201ENSMUST00000199560 135 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.7□□□□□ -2.3
Shroom3Q9QXN0 Gm24226-201ENSMUST00000158826 97 ntBASIC0.69□□□□□ -2.3
Shroom3Q9QXN0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Shroom3Q9QXN0 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.69□□□□□ -2.3
Shroom3Q9QXN0 Gm23735-201ENSMUST00000082551 134 ntBASIC0.69□□□□□ -2.3
Shroom3Q9QXN0 Gm23036-201ENSMUST00000157885 99 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Gm26007-201ENSMUST00000158798 120 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Gm25641-201ENSMUST00000175135 108 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Gm42845-201ENSMUST00000197766 105 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Gm23245-201ENSMUST00000083370 135 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Mir15b-201ENSMUST00000083646 64 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Mir494-201ENSMUST00000093632 85 ntBASIC0.68□□□□□ -2.3
Shroom3Q9QXN0 Mir669h-201ENSMUST00000116944 125 ntBASIC0.67□□□□□ -2.3
Shroom3Q9QXN0 Gm26257-201ENSMUST00000122500 107 ntBASIC0.67□□□□□ -2.3
Shroom3Q9QXN0 Gm25055-201ENSMUST00000157369 76 ntBASIC0.67□□□□□ -2.3
Shroom3Q9QXN0 Gm24777-201ENSMUST00000157644 107 ntBASIC0.67□□□□□ -2.3
Shroom3Q9QXN0 Gm22520-201ENSMUST00000158269 129 ntBASIC0.67□□□□□ -2.3
Shroom3Q9QXN0 Gm13065-201ENSMUST00000119178 141 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm23072-201ENSMUST00000158243 123 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm25010-201ENSMUST00000158403 65 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm27554-201ENSMUST00000185074 98 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm42677-201ENSMUST00000196363 127 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm24396-201ENSMUST00000116905 93 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm25183-201ENSMUST00000157752 106 ntBASIC0.66□□□□□ -2.3
Shroom3Q9QXN0 Gm23994-201ENSMUST00000158059 88 ntBASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Gm23649-201ENSMUST00000179007 107 ntBASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Mir6364-201ENSMUST00000183396 86 ntBASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Gm25652-201ENSMUST00000083780 103 ntBASIC0.65□□□□□ -2.31
Shroom3Q9QXN0 Gm24201-201ENSMUST00000082946 125 ntBASIC0.64□□□□□ -2.31
Shroom3Q9QXN0 Gm27450-201ENSMUST00000104632 90 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Gm25648-201ENSMUST00000177844 79 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Mir717-201ENSMUST00000102259 109 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.63□□□□□ -2.31
Shroom3Q9QXN0 Gm22459-201ENSMUST00000082577 108 ntBASIC0.62□□□□□ -2.31
Shroom3Q9QXN0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 Gm25656-201ENSMUST00000158466 66 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 Gm24927-201ENSMUST00000083397 107 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 Gm24701-201ENSMUST00000101946 105 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 Gm25307-201ENSMUST00000158885 106 ntBASIC0.61□□□□□ -2.31
Shroom3Q9QXN0 Gm25993-201ENSMUST00000175391 80 ntBASIC0.6□□□□□ -2.31
Shroom3Q9QXN0 Gm27937-201ENSMUST00000183605 88 ntBASIC0.6□□□□□ -2.31
Shroom3Q9QXN0 Gm38113-201ENSMUST00000193704 201 ntBASIC0.6□□□□□ -2.31
Shroom3Q9QXN0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.6□□□□□ -2.31
Shroom3Q9QXN0 Mir695-201ENSMUST00000102261 109 ntBASIC0.59□□□□□ -2.31
Shroom3Q9QXN0 Mir224-201ENSMUST00000083608 82 ntBASIC0.59□□□□□ -2.31
Shroom3Q9QXN0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
Shroom3Q9QXN0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.59□□□□□ -2.32
Shroom3Q9QXN0 Gm24258-201ENSMUST00000083739 133 ntBASIC0.59□□□□□ -2.32
Shroom3Q9QXN0 Gm25186-201ENSMUST00000083909 108 ntBASIC0.59□□□□□ -2.32
Shroom3Q9QXN0 Gm22595-201ENSMUST00000104250 130 ntBASIC0.58□□□□□ -2.32
Shroom3Q9QXN0 Gm25309-201ENSMUST00000116728 126 ntBASIC0.58□□□□□ -2.32
Shroom3Q9QXN0 Gm45125-201ENSMUST00000206908 151 ntBASIC0.58□□□□□ -2.32
Shroom3Q9QXN0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.58□□□□□ -2.32
Shroom3Q9QXN0 Gm24793-201ENSMUST00000104289 132 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Gm44455-201ENSMUST00000200061 82 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Mir6904-201ENSMUST00000183443 67 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.57□□□□□ -2.32
Shroom3Q9QXN0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Shroom3Q9QXN0 Mir670-201ENSMUST00000102380 100 ntBASIC0.56□□□□□ -2.32
Shroom3Q9QXN0 Gm44327-201ENSMUST00000200068 117 ntBASIC0.56□□□□□ -2.32
Shroom3Q9QXN0 Gm23020-201ENSMUST00000158766 253 ntBASIC0.56□□□□□ -2.32
Shroom3Q9QXN0 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms