Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm23714-201ENSMUST00000179259 105 ntBASIC1,49□□□□□ -2,17
Ube3bQ9ES34 Gm24920-201ENSMUST00000083018 85 ntBASIC1,49□□□□□ -2,17
Ube3bQ9ES34 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1,49□□□□□ -2,17
Ube3bQ9ES34 Gm23494-201ENSMUST00000116830 126 ntBASIC1,48□□□□□ -2,17
Ube3bQ9ES34 Gm42533-201ENSMUST00000196247 157 ntBASIC1,48□□□□□ -2,17
Ube3bQ9ES34 Gm23787-201ENSMUST00000122538 73 ntBASIC1,47□□□□□ -2,17
Ube3bQ9ES34 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,47□□□□□ -2,17
Ube3bQ9ES34 Gm43911-201ENSMUST00000203097 76 ntBASIC1,47□□□□□ -2,17
Ube3bQ9ES34 Gm24252-201ENSMUST00000083700 132 ntBASIC1,47□□□□□ -2,17
Ube3bQ9ES34 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,46□□□□□ -2,18
Ube3bQ9ES34 Gm24555-201ENSMUST00000104548 124 ntBASIC1,46□□□□□ -2,18
Ube3bQ9ES34 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,46□□□□□ -2,18
Ube3bQ9ES34 Gm24297-201ENSMUST00000158300 68 ntBASIC1,46□□□□□ -2,18
Ube3bQ9ES34 Mir6962-201ENSMUST00000199512 63 ntBASIC1,46□□□□□ -2,18
Ube3bQ9ES34 Gm22780-201ENSMUST00000104084 132 ntBASIC1,45□□□□□ -2,18
Ube3bQ9ES34 Gm23020-201ENSMUST00000158766 253 ntBASIC1,45□□□□□ -2,18
Ube3bQ9ES34 mt-Tw-201ENSMUST00000082397 67 ntBASIC1,45□□□□□ -2,18
Ube3bQ9ES34 Gm22302-201ENSMUST00000082657 106 ntBASIC1,45□□□□□ -2,18
Ube3bQ9ES34 Snord13-201ENSMUST00000157627 104 ntBASIC1,44□□□□□ -2,18
Ube3bQ9ES34 Mir15a-201ENSMUST00000175266 84 ntBASIC1,44□□□□□ -2,18
Ube3bQ9ES34 Gm42845-201ENSMUST00000197766 105 ntBASIC1,44□□□□□ -2,18
Ube3bQ9ES34 Gm25522-201ENSMUST00000158394 105 ntBASIC1,43□□□□□ -2,18
Ube3bQ9ES34 Gm25275-201ENSMUST00000104297 129 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Gm22431-201ENSMUST00000158545 107 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Gm25768-201ENSMUST00000158570 98 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Gm23636-201ENSMUST00000175070 95 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Snora62-201ENSMUST00000082991 149 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Gm23347-201ENSMUST00000083823 82 ntBASIC1,42□□□□□ -2,18
Ube3bQ9ES34 Gm24865-201ENSMUST00000103246 96 ntBASIC1,41□□□□□ -2,18
Ube3bQ9ES34 Gm27894-201ENSMUST00000184177 92 ntBASIC1,41□□□□□ -2,18
Ube3bQ9ES34 Gm22455-201ENSMUST00000082580 71 ntBASIC1,41□□□□□ -2,18
Ube3bQ9ES34 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1,4□□□□□ -2,19
Ube3bQ9ES34 Gm25779-201ENSMUST00000116710 95 ntBASIC1,4□□□□□ -2,19
Ube3bQ9ES34 Gm27974-201ENSMUST00000183415 105 ntBASIC1,4□□□□□ -2,19
Ube3bQ9ES34 Gm27943-201ENSMUST00000184844 116 ntBASIC1,4□□□□□ -2,19
Ube3bQ9ES34 Gm44483-201ENSMUST00000197203 97 ntBASIC1,4□□□□□ -2,19
Ube3bQ9ES34 Gm22980-201ENSMUST00000082608 70 ntBASIC1,39□□□□□ -2,19
Ube3bQ9ES34 Gm25128-201ENSMUST00000083339 76 ntBASIC1,39□□□□□ -2,19
Ube3bQ9ES34 Gm23483-201ENSMUST00000104179 108 ntBASIC1,38□□□□□ -2,19
Ube3bQ9ES34 Gm22485-201ENSMUST00000157990 109 ntBASIC1,38□□□□□ -2,19
Ube3bQ9ES34 Gm22074-201ENSMUST00000158595 113 ntBASIC1,38□□□□□ -2,19
Ube3bQ9ES34 Gm44455-201ENSMUST00000200061 82 ntBASIC1,38□□□□□ -2,19
Ube3bQ9ES34 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1,38□□□□□ -2,19
Ube3bQ9ES34 Gm22303-201ENSMUST00000082686 122 ntBASIC1,36□□□□□ -2,19
Ube3bQ9ES34 Gm26082-201ENSMUST00000104070 127 ntBASIC1,34□□□□□ -2,19
Ube3bQ9ES34 Mir1955-201ENSMUST00000158014 98 ntBASIC1,34□□□□□ -2,19
Ube3bQ9ES34 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,33□□□□□ -2,2
Ube3bQ9ES34 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1,33□□□□□ -2,2
Ube3bQ9ES34 Gm25495-201ENSMUST00000104431 131 ntBASIC1,32□□□□□ -2,2
Ube3bQ9ES34 Gm23329-201ENSMUST00000157415 108 ntBASIC1,32□□□□□ -2,2
Ube3bQ9ES34 Gm27711-201ENSMUST00000183802 118 ntBASIC1,32□□□□□ -2,2
Ube3bQ9ES34 Mir6905-201ENSMUST00000184228 70 ntBASIC1,32□□□□□ -2,2
Ube3bQ9ES34 Gm24459-201ENSMUST00000082730 86 ntBASIC1,32□□□□□ -2,2
Ube3bQ9ES34 Gm12432-201ENSMUST00000119540 186 ntBASIC1,31□□□□□ -2,2
Ube3bQ9ES34 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,31□□□□□ -2,2
Ube3bQ9ES34 Mir6381-201ENSMUST00000183426 87 ntBASIC1,31□□□□□ -2,2
Ube3bQ9ES34 Mir7059-201ENSMUST00000184825 59 ntBASIC1,31□□□□□ -2,2
Ube3bQ9ES34 Snord67-201ENSMUST00000104033 111 ntBASIC1,29□□□□□ -2,2
Ube3bQ9ES34 Mir6240-201ENSMUST00000184281 117 ntBASIC1,29□□□□□ -2,2
Ube3bQ9ES34 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,29□□□□□ -2,2
Ube3bQ9ES34 Mir196b-201ENSMUST00000083509 85 ntBASIC1,29□□□□□ -2,2
Ube3bQ9ES34 Gm23173-201ENSMUST00000157161 160 ntBASIC1,28□□□□□ -2,2
Ube3bQ9ES34 Mir3968-201ENSMUST00000175355 100 ntBASIC1,28□□□□□ -2,2
Ube3bQ9ES34 Gm22301-201ENSMUST00000082656 107 ntBASIC1,28□□□□□ -2,2
Ube3bQ9ES34 Gm23245-201ENSMUST00000083370 135 ntBASIC1,28□□□□□ -2,2
Ube3bQ9ES34 Mir101a-201ENSMUST00000083517 83 ntBASIC1,28□□□□□ -2,2
Ube3bQ9ES34 Gm22559-201ENSMUST00000157329 134 ntBASIC1,27□□□□□ -2,21
Ube3bQ9ES34 Mir3105-201ENSMUST00000175480 85 ntBASIC1,27□□□□□ -2,21
Ube3bQ9ES34 Mir200a-201ENSMUST00000083466 90 ntBASIC1,27□□□□□ -2,21
Ube3bQ9ES34 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1,27□□□□□ -2,21
Ube3bQ9ES34 Gm26363-201ENSMUST00000158866 83 ntBASIC1,26□□□□□ -2,21
Ube3bQ9ES34 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,26□□□□□ -2,21
Ube3bQ9ES34 Mir22-201ENSMUST00000083595 95 ntBASIC1,26□□□□□ -2,21
Ube3bQ9ES34 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1,25□□□□□ -2,21
Ube3bQ9ES34 Gm23328-201ENSMUST00000157418 132 ntBASIC1,25□□□□□ -2,21
Ube3bQ9ES34 AC161271.1-201ENSMUST00000226914 150 ntBASIC1,25□□□□□ -2,21
Ube3bQ9ES34 Gm22879-201ENSMUST00000082895 74 ntBASIC1,25□□□□□ -2,21
Ube3bQ9ES34 Mir448-201ENSMUST00000083516 112 ntBASIC1,25□□□□□ -2,21
Ube3bQ9ES34 Gm25166-201ENSMUST00000158909 111 ntBASIC1,24□□□□□ -2,21
Ube3bQ9ES34 Mir6364-201ENSMUST00000183396 86 ntBASIC1,24□□□□□ -2,21
Ube3bQ9ES34 Mir33-201ENSMUST00000083531 69 ntBASIC1,24□□□□□ -2,21
Ube3bQ9ES34 Mir7052-201ENSMUST00000184821 65 ntBASIC1,23□□□□□ -2,21
Ube3bQ9ES34 Mir7229-201ENSMUST00000197062 53 ntBASIC1,23□□□□□ -2,21
Ube3bQ9ES34 Snord32a-201ENSMUST00000083285 83 ntBASIC1,23□□□□□ -2,21
Ube3bQ9ES34 Gm44345-201ENSMUST00000199560 135 ntBASIC1,22□□□□□ -2,21
Ube3bQ9ES34 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1,22□□□□□ -2,21
Ube3bQ9ES34 Gm24278-201ENSMUST00000104239 127 ntBASIC1,21□□□□□ -2,22
Ube3bQ9ES34 DQ267101-201ENSMUST00000082562 73 ntBASIC1,21□□□□□ -2,22
Ube3bQ9ES34 Gm25132-201ENSMUST00000082652 107 ntBASIC1,21□□□□□ -2,22
Ube3bQ9ES34 Mir363-201ENSMUST00000093598 75 ntBASIC1,21□□□□□ -2,22
Ube3bQ9ES34 Gm24651-201ENSMUST00000157107 107 ntBASIC1,19□□□□□ -2,22
Ube3bQ9ES34 Gm26484-201ENSMUST00000158018 106 ntBASIC1,19□□□□□ -2,22
Ube3bQ9ES34 Mir7663-201ENSMUST00000183950 61 ntBASIC1,19□□□□□ -2,22
Ube3bQ9ES34 Gm26301-201ENSMUST00000104813 95 ntBASIC1,18□□□□□ -2,22
Ube3bQ9ES34 Gm24678-201ENSMUST00000158756 104 ntBASIC1,18□□□□□ -2,22
Ube3bQ9ES34 Mir1954-201ENSMUST00000175595 86 ntBASIC1,18□□□□□ -2,22
Ube3bQ9ES34 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,18□□□□□ -2,22
Ube3bQ9ES34 Mir1904-201ENSMUST00000122702 80 ntBASIC1,16□□□□□ -2,22
Ube3bQ9ES34 Gm22260-201ENSMUST00000178643 107 ntBASIC1,16□□□□□ -2,22
Ube3bQ9ES34 Mir7091-201ENSMUST00000184075 79 ntBASIC1,16□□□□□ -2,22
Retrieved 100 of 76,532 protein–RNA pairs in 130,8 ms