Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.14□□□□□ -2.43
Trim54Q9ERP3 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.14□□□□□ -2.43
Trim54Q9ERP3 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.15□□□□□ -2.43
Trim54Q9ERP3 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.15□□□□□ -2.43
Trim54Q9ERP3 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.16□□□□□ -2.44
Trim54Q9ERP3 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.17□□□□□ -2.44
Trim54Q9ERP3 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.17□□□□□ -2.44
Trim54Q9ERP3 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.17□□□□□ -2.44
Trim54Q9ERP3 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.18□□□□□ -2.44
Trim54Q9ERP3 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.18□□□□□ -2.44
Trim54Q9ERP3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.18□□□□□ -2.44
Trim54Q9ERP3 Mir574-201ENSMUST00000103854 78 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.19□□□□□ -2.44
Trim54Q9ERP3 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.2□□□□□ -2.44
Trim54Q9ERP3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.21□□□□□ -2.44
Trim54Q9ERP3 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.21□□□□□ -2.44
Trim54Q9ERP3 Gm24482-201ENSMUST00000117005 93 ntBASIC-0.21□□□□□ -2.44
Trim54Q9ERP3 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.21□□□□□ -2.44
Trim54Q9ERP3 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.21□□□□□ -2.44
Trim54Q9ERP3 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.22□□□□□ -2.44
Trim54Q9ERP3 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.22□□□□□ -2.44
Trim54Q9ERP3 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.22□□□□□ -2.44
Trim54Q9ERP3 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.22□□□□□ -2.44
Trim54Q9ERP3 Gm24410-201ENSMUST00000083433 107 ntBASIC-0.22□□□□□ -2.44
Trim54Q9ERP3 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.23□□□□□ -2.45
Trim54Q9ERP3 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.23□□□□□ -2.45
Trim54Q9ERP3 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.23□□□□□ -2.45
Trim54Q9ERP3 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.23□□□□□ -2.45
Trim54Q9ERP3 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.23□□□□□ -2.45
Trim54Q9ERP3 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.24□□□□□ -2.45
Trim54Q9ERP3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.25□□□□□ -2.45
Trim54Q9ERP3 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.26□□□□□ -2.45
Trim54Q9ERP3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.27□□□□□ -2.45
Trim54Q9ERP3 Snora62-201ENSMUST00000082991 149 ntBASIC-0.28□□□□□ -2.45
Trim54Q9ERP3 Mir741-201ENSMUST00000103931 71 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Snora26-201ENSMUST00000175614 121 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.29□□□□□ -2.46
Trim54Q9ERP3 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.3□□□□□ -2.46
Trim54Q9ERP3 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.3□□□□□ -2.46
Trim54Q9ERP3 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.3□□□□□ -2.46
Trim54Q9ERP3 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.31□□□□□ -2.46
Trim54Q9ERP3 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.31□□□□□ -2.46
Trim54Q9ERP3 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.31□□□□□ -2.46
Trim54Q9ERP3 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.31□□□□□ -2.46
Trim54Q9ERP3 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.31□□□□□ -2.46
Trim54Q9ERP3 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.32□□□□□ -2.46
Trim54Q9ERP3 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.33□□□□□ -2.46
Trim54Q9ERP3 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.33□□□□□ -2.46
Trim54Q9ERP3 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.33□□□□□ -2.46
Trim54Q9ERP3 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.34□□□□□ -2.46
Trim54Q9ERP3 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.35□□□□□ -2.47
Trim54Q9ERP3 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.35□□□□□ -2.47
Trim54Q9ERP3 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.35□□□□□ -2.47
Trim54Q9ERP3 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.36□□□□□ -2.47
Trim54Q9ERP3 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.36□□□□□ -2.47
Trim54Q9ERP3 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.36□□□□□ -2.47
Trim54Q9ERP3 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.36□□□□□ -2.47
Trim54Q9ERP3 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.36□□□□□ -2.47
Trim54Q9ERP3 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.37□□□□□ -2.47
Trim54Q9ERP3 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.37□□□□□ -2.47
Trim54Q9ERP3 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.37□□□□□ -2.47
Trim54Q9ERP3 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 217.4 ms