Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trim42Q9D2H5 Gm23573-201ENSMUST00000104408 107 ntBASIC1.21□□□□□ -2.22
Trim42Q9D2H5 Gm25166-201ENSMUST00000158909 111 ntBASIC1.21□□□□□ -2.22
Trim42Q9D2H5 Gm44327-201ENSMUST00000200068 117 ntBASIC1.21□□□□□ -2.22
Trim42Q9D2H5 Gm25296-201ENSMUST00000082566 67 ntBASIC1.21□□□□□ -2.22
Trim42Q9D2H5 Mir15a-201ENSMUST00000175266 84 ntBASIC1.2□□□□□ -2.22
Trim42Q9D2H5 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.2□□□□□ -2.22
Trim42Q9D2H5 Mir23a-201ENSMUST00000083677 75 ntBASIC1.2□□□□□ -2.22
Trim42Q9D2H5 Gm25820-201ENSMUST00000198589 127 ntBASIC1.19□□□□□ -2.22
Trim42Q9D2H5 Gm24920-201ENSMUST00000083018 85 ntBASIC1.19□□□□□ -2.22
Trim42Q9D2H5 Gm26052-201ENSMUST00000104646 84 ntBASIC1.18□□□□□ -2.22
Trim42Q9D2H5 Gm23267-201ENSMUST00000178490 132 ntBASIC1.18□□□□□ -2.22
Trim42Q9D2H5 Gm26306-201ENSMUST00000157773 119 ntBASIC1.17□□□□□ -2.22
Trim42Q9D2H5 Gm27974-201ENSMUST00000183415 105 ntBASIC1.17□□□□□ -2.22
Trim42Q9D2H5 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Trim42Q9D2H5 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trim42Q9D2H5 Gm24555-201ENSMUST00000104548 124 ntBASIC1.15□□□□□ -2.23
Trim42Q9D2H5 Gm23494-201ENSMUST00000116830 126 ntBASIC1.15□□□□□ -2.23
Trim42Q9D2H5 Gm27943-201ENSMUST00000184844 116 ntBASIC1.15□□□□□ -2.23
Trim42Q9D2H5 Mir211-201ENSMUST00000083651 106 ntBASIC1.15□□□□□ -2.23
Trim42Q9D2H5 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Gm23020-201ENSMUST00000158766 253 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Gm6607-201ENSMUST00000215035 328 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 mt-Tw-201ENSMUST00000082397 67 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Gm25683-201ENSMUST00000083940 131 ntBASIC1.14□□□□□ -2.23
Trim42Q9D2H5 Gm22357-201ENSMUST00000082882 83 ntBASIC1.13□□□□□ -2.23
Trim42Q9D2H5 Mir101a-201ENSMUST00000083517 83 ntBASIC1.13□□□□□ -2.23
Trim42Q9D2H5 Mir8119-201ENSMUST00000183371 129 ntBASIC1.12□□□□□ -2.23
Trim42Q9D2H5 DQ267101-201ENSMUST00000082562 73 ntBASIC1.12□□□□□ -2.23
Trim42Q9D2H5 Gm22127-201ENSMUST00000083239 106 ntBASIC1.12□□□□□ -2.23
Trim42Q9D2H5 Gm44455-201ENSMUST00000200061 82 ntBASIC1.11□□□□□ -2.23
Trim42Q9D2H5 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm25275-201ENSMUST00000104297 129 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm23967-201ENSMUST00000175062 78 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm27326-201ENSMUST00000183504 95 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm42845-201ENSMUST00000197766 105 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm22455-201ENSMUST00000082580 71 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Gm22303-201ENSMUST00000082686 122 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Snora62-201ENSMUST00000082991 149 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 Mir33-201ENSMUST00000083531 69 ntBASIC1.1□□□□□ -2.23
Trim42Q9D2H5 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.09□□□□□ -2.23
Trim42Q9D2H5 Mir200a-201ENSMUST00000083466 90 ntBASIC1.08□□□□□ -2.24
Trim42Q9D2H5 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trim42Q9D2H5 Gm24431-201ENSMUST00000104073 66 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Gm12432-201ENSMUST00000119540 186 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Gm24297-201ENSMUST00000158300 68 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Snord32a-201ENSMUST00000083285 83 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Mir448-201ENSMUST00000083516 112 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Snord35a-201ENSMUST00000083884 90 ntBASIC1.07□□□□□ -2.24
Trim42Q9D2H5 Gm22149-201ENSMUST00000104442 136 ntBASIC1.06□□□□□ -2.24
Trim42Q9D2H5 Gm23714-201ENSMUST00000179259 105 ntBASIC1.06□□□□□ -2.24
Trim42Q9D2H5 Mir8116-201ENSMUST00000184134 97 ntBASIC1.06□□□□□ -2.24
Trim42Q9D2H5 Mir6962-201ENSMUST00000199512 63 ntBASIC1.06□□□□□ -2.24
Trim42Q9D2H5 Gm22302-201ENSMUST00000082657 106 ntBASIC1.06□□□□□ -2.24
Trim42Q9D2H5 Gm23893-201ENSMUST00000158106 134 ntBASIC1.05□□□□□ -2.24
Trim42Q9D2H5 Mir7063-201ENSMUST00000184158 91 ntBASIC1.05□□□□□ -2.24
Trim42Q9D2H5 Gm44345-201ENSMUST00000199560 135 ntBASIC1.05□□□□□ -2.24
Trim42Q9D2H5 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.05□□□□□ -2.24
Trim42Q9D2H5 Mir343-201ENSMUST00000102360 75 ntBASIC1.04□□□□□ -2.24
Trim42Q9D2H5 Gm23766-201ENSMUST00000103894 80 ntBASIC1.04□□□□□ -2.24
Trim42Q9D2H5 Snord67-201ENSMUST00000104033 111 ntBASIC1.04□□□□□ -2.24
Trim42Q9D2H5 Gm43911-201ENSMUST00000203097 76 ntBASIC1.04□□□□□ -2.24
Trim42Q9D2H5 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trim42Q9D2H5 Gm25522-201ENSMUST00000158394 105 ntBASIC1.03□□□□□ -2.24
Trim42Q9D2H5 Mir6381-201ENSMUST00000183426 87 ntBASIC1.03□□□□□ -2.24
Trim42Q9D2H5 Mir7665-201ENSMUST00000184907 63 ntBASIC1.03□□□□□ -2.24
Trim42Q9D2H5 Gm22780-201ENSMUST00000104084 132 ntBASIC1.02□□□□□ -2.25
Trim42Q9D2H5 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Trim42Q9D2H5 Gm23347-201ENSMUST00000083823 82 ntBASIC1.02□□□□□ -2.25
Trim42Q9D2H5 Gm22431-201ENSMUST00000158545 107 ntBASIC1.01□□□□□ -2.25
Trim42Q9D2H5 Mir6364-201ENSMUST00000183396 86 ntBASIC1.01□□□□□ -2.25
Trim42Q9D2H5 Mir6380-201ENSMUST00000184334 81 ntBASIC1.01□□□□□ -2.25
Trim42Q9D2H5 Gm24252-201ENSMUST00000083700 132 ntBASIC1.01□□□□□ -2.25
Trim42Q9D2H5 Gm26082-201ENSMUST00000104070 127 ntBASIC1□□□□□ -2.25
Trim42Q9D2H5 Gm24278-201ENSMUST00000104239 127 ntBASIC1□□□□□ -2.25
Trim42Q9D2H5 Gm24678-201ENSMUST00000158756 104 ntBASIC1□□□□□ -2.25
Trim42Q9D2H5 Mir3105-201ENSMUST00000175480 85 ntBASIC1□□□□□ -2.25
Trim42Q9D2H5 Gm27894-201ENSMUST00000184177 92 ntBASIC1□□□□□ -2.25
Trim42Q9D2H5 Mir695-201ENSMUST00000102261 109 ntBASIC0.99□□□□□ -2.25
Trim42Q9D2H5 Gm25779-201ENSMUST00000116710 95 ntBASIC0.99□□□□□ -2.25
Trim42Q9D2H5 Gm23787-201ENSMUST00000122538 73 ntBASIC0.99□□□□□ -2.25
Trim42Q9D2H5 Gm26484-201ENSMUST00000158018 106 ntBASIC0.99□□□□□ -2.25
Trim42Q9D2H5 Mir6240-201ENSMUST00000184281 117 ntBASIC0.99□□□□□ -2.25
Trim42Q9D2H5 Gm25768-201ENSMUST00000158570 98 ntBASIC0.98□□□□□ -2.25
Trim42Q9D2H5 Mir7229-201ENSMUST00000197062 53 ntBASIC0.98□□□□□ -2.25
Trim42Q9D2H5 Gm44301-201ENSMUST00000200362 143 ntBASIC0.98□□□□□ -2.25
Trim42Q9D2H5 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trim42Q9D2H5 Gm23636-201ENSMUST00000175070 95 ntBASIC0.97□□□□□ -2.25
Trim42Q9D2H5 Gm23329-201ENSMUST00000157415 108 ntBASIC0.96□□□□□ -2.26
Trim42Q9D2H5 Gm24884-201ENSMUST00000158784 119 ntBASIC0.96□□□□□ -2.26
Trim42Q9D2H5 Mir22-201ENSMUST00000083595 95 ntBASIC0.96□□□□□ -2.26
Trim42Q9D2H5 Mir7059-201ENSMUST00000184825 59 ntBASIC0.95□□□□□ -2.26
Trim42Q9D2H5 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Trim42Q9D2H5 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.95□□□□□ -2.26
Trim42Q9D2H5 Mir1955-201ENSMUST00000158014 98 ntBASIC0.94□□□□□ -2.26
Trim42Q9D2H5 Gm23173-201ENSMUST00000157161 160 ntBASIC0.93□□□□□ -2.26
Trim42Q9D2H5 Gm20386-201ENSMUST00000174010 132 ntBASIC0.93□□□□□ -2.26
Trim42Q9D2H5 Mir3968-201ENSMUST00000175355 100 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 223.5 ms