Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC125190.3-201ENSMUST00000223224 121 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm24252-201ENSMUST00000083700 132 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm24796-201ENSMUST00000104007 107 ntBASIC1,21□□□□□ -2,22
Trim11Q99PQ2 Gm23020-201ENSMUST00000158766 253 ntBASIC1,21□□□□□ -2,22
Trim11Q99PQ2 Gm25296-201ENSMUST00000082566 67 ntBASIC1,21□□□□□ -2,22
Trim11Q99PQ2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,2□□□□□ -2,22
Trim11Q99PQ2 Gm23017-201ENSMUST00000177583 72 ntBASIC1,2□□□□□ -2,22
Trim11Q99PQ2 Mir101a-201ENSMUST00000083517 83 ntBASIC1,2□□□□□ -2,22
Trim11Q99PQ2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,2□□□□□ -2,22
Trim11Q99PQ2 Gm24377-201ENSMUST00000104398 131 ntBASIC1,19□□□□□ -2,22
Trim11Q99PQ2 Gm25166-201ENSMUST00000158909 111 ntBASIC1,19□□□□□ -2,22
Trim11Q99PQ2 Mir23a-201ENSMUST00000083677 75 ntBASIC1,19□□□□□ -2,22
Trim11Q99PQ2 Gm23955-201ENSMUST00000157214 100 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 Gm25886-201ENSMUST00000157780 114 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 mt-Tw-201ENSMUST00000082397 67 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 Gm22298-201ENSMUST00000082662 133 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 Gm24920-201ENSMUST00000083018 85 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 Mir22-201ENSMUST00000083595 95 ntBASIC1,18□□□□□ -2,22
Trim11Q99PQ2 Mir343-201ENSMUST00000102360 75 ntBASIC1,17□□□□□ -2,22
Trim11Q99PQ2 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,17□□□□□ -2,22
Trim11Q99PQ2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,17□□□□□ -2,22
Trim11Q99PQ2 Gm24431-201ENSMUST00000104073 66 ntBASIC1,15□□□□□ -2,23
Trim11Q99PQ2 Gm23494-201ENSMUST00000116830 126 ntBASIC1,15□□□□□ -2,23
Trim11Q99PQ2 Gm24531-201ENSMUST00000157945 100 ntBASIC1,15□□□□□ -2,23
Trim11Q99PQ2 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Gm23573-201ENSMUST00000104408 107 ntBASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Gm25222-201ENSMUST00000158199 126 ntBASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Gm23636-201ENSMUST00000175070 95 ntBASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Mir3087-201ENSMUST00000199405 56 ntBASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Gm25683-201ENSMUST00000083940 131 ntBASIC1,14□□□□□ -2,23
Trim11Q99PQ2 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1,13□□□□□ -2,23
Trim11Q99PQ2 Mir8119-201ENSMUST00000183371 129 ntBASIC1,13□□□□□ -2,23
Trim11Q99PQ2 Mir6380-201ENSMUST00000184334 81 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Gm42845-201ENSMUST00000197766 105 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Gm6607-201ENSMUST00000215035 328 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Gm22303-201ENSMUST00000082686 122 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Mir200a-201ENSMUST00000083466 90 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Mir33-201ENSMUST00000083531 69 ntBASIC1,12□□□□□ -2,23
Trim11Q99PQ2 Gm25275-201ENSMUST00000104297 129 ntBASIC1,11□□□□□ -2,23
Trim11Q99PQ2 Gm44455-201ENSMUST00000200061 82 ntBASIC1,11□□□□□ -2,23
Trim11Q99PQ2 Mir448-201ENSMUST00000083516 112 ntBASIC1,11□□□□□ -2,23
Trim11Q99PQ2 Snord35a-201ENSMUST00000083884 90 ntBASIC1,11□□□□□ -2,23
Trim11Q99PQ2 Gm24297-201ENSMUST00000158300 68 ntBASIC1,1□□□□□ -2,23
Trim11Q99PQ2 Mir6905-201ENSMUST00000184228 70 ntBASIC1,1□□□□□ -2,23
Trim11Q99PQ2 Mir6962-201ENSMUST00000199512 63 ntBASIC1,1□□□□□ -2,23
Trim11Q99PQ2 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,1□□□□□ -2,23
Trim11Q99PQ2 Gm24555-201ENSMUST00000104548 124 ntBASIC1,09□□□□□ -2,23
Trim11Q99PQ2 Gm22455-201ENSMUST00000082580 71 ntBASIC1,09□□□□□ -2,23
Trim11Q99PQ2 Snora62-201ENSMUST00000082991 149 ntBASIC1,09□□□□□ -2,23
Trim11Q99PQ2 Gm22127-201ENSMUST00000083239 106 ntBASIC1,09□□□□□ -2,23
Trim11Q99PQ2 Gm26052-201ENSMUST00000104646 84 ntBASIC1,08□□□□□ -2,24
Trim11Q99PQ2 Gm12432-201ENSMUST00000119540 186 ntBASIC1,08□□□□□ -2,24
Trim11Q99PQ2 Gm25768-201ENSMUST00000158570 98 ntBASIC1,07□□□□□ -2,24
Trim11Q99PQ2 Gm44345-201ENSMUST00000199560 135 ntBASIC1,07□□□□□ -2,24
Trim11Q99PQ2 Snord32a-201ENSMUST00000083285 83 ntBASIC1,07□□□□□ -2,24
Trim11Q99PQ2 Gm26306-201ENSMUST00000157773 119 ntBASIC1,06□□□□□ -2,24
Trim11Q99PQ2 Gm27326-201ENSMUST00000183504 95 ntBASIC1,06□□□□□ -2,24
Trim11Q99PQ2 Mir7665-201ENSMUST00000184907 63 ntBASIC1,06□□□□□ -2,24
Trim11Q99PQ2 DQ267101-201ENSMUST00000082562 73 ntBASIC1,06□□□□□ -2,24
Trim11Q99PQ2 Gm23967-201ENSMUST00000175062 78 ntBASIC1,05□□□□□ -2,24
Trim11Q99PQ2 Gm22357-201ENSMUST00000082882 83 ntBASIC1,05□□□□□ -2,24
Trim11Q99PQ2 Mir695-201ENSMUST00000102261 109 ntBASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Snord67-201ENSMUST00000104033 111 ntBASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Gm23893-201ENSMUST00000158106 134 ntBASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Mir6364-201ENSMUST00000183396 86 ntBASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Gm22302-201ENSMUST00000082657 106 ntBASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,04□□□□□ -2,24
Trim11Q99PQ2 Gm24278-201ENSMUST00000104239 127 ntBASIC1,03□□□□□ -2,24
Trim11Q99PQ2 Mir3105-201ENSMUST00000175480 85 ntBASIC1,03□□□□□ -2,24
Trim11Q99PQ2 Gm25522-201ENSMUST00000158394 105 ntBASIC1,02□□□□□ -2,25
Trim11Q99PQ2 Gm23267-201ENSMUST00000178490 132 ntBASIC1,02□□□□□ -2,25
Trim11Q99PQ2 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1,01□□□□□ -2,25
Trim11Q99PQ2 Gm24678-201ENSMUST00000158756 104 ntBASIC1,01□□□□□ -2,25
Trim11Q99PQ2 Gm25820-201ENSMUST00000198589 127 ntBASIC1,01□□□□□ -2,25
Trim11Q99PQ2 Gm26484-201ENSMUST00000158018 106 ntBASIC1□□□□□ -2,25
Trim11Q99PQ2 Gm24020-201ENSMUST00000180156 108 ntBASIC1□□□□□ -2,25
Trim11Q99PQ2 Mir7229-201ENSMUST00000197062 53 ntBASIC0,99□□□□□ -2,25
Trim11Q99PQ2 Gm44301-201ENSMUST00000200362 143 ntBASIC0,99□□□□□ -2,25
Trim11Q99PQ2 Gm22431-201ENSMUST00000158545 107 ntBASIC0,98□□□□□ -2,25
Trim11Q99PQ2 Gm24884-201ENSMUST00000158784 119 ntBASIC0,97□□□□□ -2,25
Trim11Q99PQ2 Gm23347-201ENSMUST00000083823 82 ntBASIC0,95□□□□□ -2,26
Trim11Q99PQ2 Gm22469-201ENSMUST00000104118 133 ntBASIC0,94□□□□□ -2,26
Trim11Q99PQ2 Gm23329-201ENSMUST00000157415 108 ntBASIC0,94□□□□□ -2,26
Trim11Q99PQ2 Gm43911-201ENSMUST00000203097 76 ntBASIC0,94□□□□□ -2,26
Trim11Q99PQ2 Mir27b-201ENSMUST00000083541 73 ntBASIC0,94□□□□□ -2,26
Trim11Q99PQ2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0,94□□□□□ -2,26
Trim11Q99PQ2 Gm22689-201ENSMUST00000102452 110 ntBASIC0,93□□□□□ -2,26
Trim11Q99PQ2 Gm23173-201ENSMUST00000157161 160 ntBASIC0,93□□□□□ -2,26
Trim11Q99PQ2 Gm20386-201ENSMUST00000174010 132 ntBASIC0,93□□□□□ -2,26
Trim11Q99PQ2 Gm25779-201ENSMUST00000116710 95 ntBASIC0,92□□□□□ -2,26
Trim11Q99PQ2 Mir196b-201ENSMUST00000083509 85 ntBASIC0,91□□□□□ -2,26
Trim11Q99PQ2 Gm23766-201ENSMUST00000103894 80 ntBASIC0,9□□□□□ -2,27
Trim11Q99PQ2 Gm25408-201ENSMUST00000104104 133 ntBASIC0,9□□□□□ -2,27
Trim11Q99PQ2 Gm23787-201ENSMUST00000122538 73 ntBASIC0,9□□□□□ -2,27
Trim11Q99PQ2 Gm22879-201ENSMUST00000082895 74 ntBASIC0,9□□□□□ -2,27
Trim11Q99PQ2 Snord33-201ENSMUST00000083694 84 ntBASIC0,9□□□□□ -2,27
Trim11Q99PQ2 Mir670-201ENSMUST00000102380 100 ntBASIC0,89□□□□□ -2,27
Trim11Q99PQ2 Gm25378-201ENSMUST00000104333 129 ntBASIC0,89□□□□□ -2,27
Trim11Q99PQ2 Gm23714-201ENSMUST00000179259 105 ntBASIC0,89□□□□□ -2,27
Retrieved 100 of 76,532 protein–RNA pairs in 116,8 ms