Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 AC129019.2-201ENSMUST00000222063 202 ntBASIC0,74□□□□□ -2,29
Rpa1Q8VEE4 Gm23735-201ENSMUST00000082551 134 ntBASIC0,74□□□□□ -2,29
Rpa1Q8VEE4 Gm25010-201ENSMUST00000158403 65 ntBASIC0,73□□□□□ -2,29
Rpa1Q8VEE4 Gm22239-201ENSMUST00000175220 103 ntBASIC0,73□□□□□ -2,29
Rpa1Q8VEE4 Gm25847-201ENSMUST00000116793 96 ntBASIC0,72□□□□□ -2,29
Rpa1Q8VEE4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0,72□□□□□ -2,29
Rpa1Q8VEE4 Gm23036-201ENSMUST00000157885 99 ntBASIC0,72□□□□□ -2,29
Rpa1Q8VEE4 Gm45541-201ENSMUST00000210443 54 ntBASIC0,72□□□□□ -2,29
Rpa1Q8VEE4 Snord45b-201ENSMUST00000082797 71 ntBASIC0,72□□□□□ -2,29
Rpa1Q8VEE4 Gm23826-201ENSMUST00000157394 119 ntBASIC0,71□□□□□ -2,3
Rpa1Q8VEE4 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0,71□□□□□ -2,3
Rpa1Q8VEE4 Mir297-1-201ENSMUST00000103800 76 ntBASIC0,7□□□□□ -2,3
Rpa1Q8VEE4 Gm24579-201ENSMUST00000103964 144 ntBASIC0,7□□□□□ -2,3
Rpa1Q8VEE4 Gm25440-201ENSMUST00000158279 154 ntBASIC0,7□□□□□ -2,3
Rpa1Q8VEE4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0,69□□□□□ -2,3
Rpa1Q8VEE4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0,69□□□□□ -2,3
Rpa1Q8VEE4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0,68□□□□□ -2,3
Rpa1Q8VEE4 Snord67-201ENSMUST00000104033 111 ntBASIC0,68□□□□□ -2,3
Rpa1Q8VEE4 Gm23785-201ENSMUST00000116741 96 ntBASIC0,68□□□□□ -2,3
Rpa1Q8VEE4 Mir3109-201ENSMUST00000175301 88 ntBASIC0,68□□□□□ -2,3
Rpa1Q8VEE4 Mir15b-201ENSMUST00000083646 64 ntBASIC0,68□□□□□ -2,3
Rpa1Q8VEE4 Gm27656-201ENSMUST00000185055 80 ntBASIC0,67□□□□□ -2,3
Rpa1Q8VEE4 Gm22981-201ENSMUST00000082611 75 ntBASIC0,66□□□□□ -2,3
Rpa1Q8VEE4 Mir18-201ENSMUST00000083469 96 ntBASIC0,66□□□□□ -2,3
Rpa1Q8VEE4 Gm22087-201ENSMUST00000158339 88 ntBASIC0,65□□□□□ -2,31
Rpa1Q8VEE4 Gm24258-201ENSMUST00000083739 133 ntBASIC0,65□□□□□ -2,31
Rpa1Q8VEE4 Gm43885-201ENSMUST00000204928 2542 ntBASIC0,64□□□□□ -2,31
Rpa1Q8VEE4 Mir216a-201ENSMUST00000083605 72 ntBASIC0,64□□□□□ -2,31
Rpa1Q8VEE4 Gm23340-201ENSMUST00000158955 123 ntBASIC0,63□□□□□ -2,31
Rpa1Q8VEE4 Gm25275-201ENSMUST00000104297 129 ntBASIC0,62□□□□□ -2,31
Rpa1Q8VEE4 Gm22455-201ENSMUST00000082580 71 ntBASIC0,61□□□□□ -2,31
Rpa1Q8VEE4 Mir494-201ENSMUST00000093632 85 ntBASIC0,61□□□□□ -2,31
Rpa1Q8VEE4 Gm25309-201ENSMUST00000116728 126 ntBASIC0,6□□□□□ -2,31
Rpa1Q8VEE4 Gm23590-201ENSMUST00000157661 104 ntBASIC0,6□□□□□ -2,31
Rpa1Q8VEE4 Snord71-201ENSMUST00000104361 85 ntBASIC0,59□□□□□ -2,31
Rpa1Q8VEE4 Gm22673-201ENSMUST00000104415 131 ntBASIC0,59□□□□□ -2,31
Rpa1Q8VEE4 Gm45125-201ENSMUST00000206908 151 ntBASIC0,59□□□□□ -2,31
Rpa1Q8VEE4 Mir23a-201ENSMUST00000083677 75 ntBASIC0,59□□□□□ -2,31
Rpa1Q8VEE4 Gm24796-201ENSMUST00000104007 107 ntBASIC0,58□□□□□ -2,32
Rpa1Q8VEE4 Gm23856-201ENSMUST00000158380 99 ntBASIC0,58□□□□□ -2,32
Rpa1Q8VEE4 Gm25161-201ENSMUST00000158913 132 ntBASIC0,58□□□□□ -2,32
Rpa1Q8VEE4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0,58□□□□□ -2,32
Rpa1Q8VEE4 Gm22302-201ENSMUST00000082657 106 ntBASIC0,58□□□□□ -2,32
Rpa1Q8VEE4 Gm24331-201ENSMUST00000175099 67 ntBASIC0,57□□□□□ -2,32
Rpa1Q8VEE4 Gm23801-201ENSMUST00000175561 67 ntBASIC0,57□□□□□ -2,32
Rpa1Q8VEE4 Gm24485-201ENSMUST00000178283 67 ntBASIC0,57□□□□□ -2,32
Rpa1Q8VEE4 Gm24323-201ENSMUST00000175342 77 ntBASIC0,56□□□□□ -2,32
Rpa1Q8VEE4 Gm23969-201ENSMUST00000083324 74 ntBASIC0,56□□□□□ -2,32
Rpa1Q8VEE4 Gm25170-201ENSMUST00000104191 129 ntBASIC0,55□□□□□ -2,32
Rpa1Q8VEE4 Gm26257-201ENSMUST00000122500 107 ntBASIC0,55□□□□□ -2,32
Rpa1Q8VEE4 Gm24400-201ENSMUST00000157865 107 ntBASIC0,55□□□□□ -2,32
Rpa1Q8VEE4 Gm22565-201ENSMUST00000175540 69 ntBASIC0,55□□□□□ -2,32
Rpa1Q8VEE4 Gm25274-201ENSMUST00000104296 135 ntBASIC0,54□□□□□ -2,32
Rpa1Q8VEE4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0,54□□□□□ -2,32
Rpa1Q8VEE4 Gm26236-201ENSMUST00000175536 137 ntBASIC0,54□□□□□ -2,32
Rpa1Q8VEE4 Gm25354-201ENSMUST00000179110 105 ntBASIC0,54□□□□□ -2,32
Rpa1Q8VEE4 Gm24379-201ENSMUST00000122695 86 ntBASIC0,52□□□□□ -2,33
Rpa1Q8VEE4 Scarna8-201ENSMUST00000158333 131 ntBASIC0,52□□□□□ -2,33
Rpa1Q8VEE4 Gm43432-201ENSMUST00000196352 121 ntBASIC0,52□□□□□ -2,33
Rpa1Q8VEE4 Mir224-201ENSMUST00000083608 82 ntBASIC0,52□□□□□ -2,33
Rpa1Q8VEE4 Mir717-201ENSMUST00000102259 109 ntBASIC0,51□□□□□ -2,33
Rpa1Q8VEE4 Gm23494-201ENSMUST00000116830 126 ntBASIC0,51□□□□□ -2,33
Rpa1Q8VEE4 Gm25552-201ENSMUST00000158081 91 ntBASIC0,51□□□□□ -2,33
Rpa1Q8VEE4 Gm25522-201ENSMUST00000158394 105 ntBASIC0,51□□□□□ -2,33
Rpa1Q8VEE4 Gm22165-201ENSMUST00000158414 103 ntBASIC0,5□□□□□ -2,33
Rpa1Q8VEE4 CT030170.1-201ENSMUST00000222183 148 ntBASIC0,5□□□□□ -2,33
Rpa1Q8VEE4 Snora62-201ENSMUST00000082991 149 ntBASIC0,5□□□□□ -2,33
Rpa1Q8VEE4 Mir10b-201ENSMUST00000083566 68 ntBASIC0,5□□□□□ -2,33
Rpa1Q8VEE4 Gm22595-201ENSMUST00000104250 130 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm23410-201ENSMUST00000179967 107 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm27475-201ENSMUST00000183420 61 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm22505-201ENSMUST00000082956 108 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm22363-201ENSMUST00000083100 108 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm23814-201ENSMUST00000083230 102 ntBASIC0,49□□□□□ -2,33
Rpa1Q8VEE4 Gm26303-201ENSMUST00000116845 119 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Gm23649-201ENSMUST00000179007 107 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Gm28001-201ENSMUST00000183561 117 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Gm37750-201ENSMUST00000193563 129 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Gm24201-201ENSMUST00000082946 125 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Mir363-201ENSMUST00000093598 75 ntBASIC0,48□□□□□ -2,33
Rpa1Q8VEE4 Mir6394-201ENSMUST00000184738 99 ntBASIC0,47□□□□□ -2,33
Rpa1Q8VEE4 Gm27263-201ENSMUST00000184760 76 ntBASIC0,47□□□□□ -2,33
Rpa1Q8VEE4 Gm42506-201ENSMUST00000202009 150 ntBASIC0,47□□□□□ -2,33
Rpa1Q8VEE4 Gm26491-201ENSMUST00000179268 121 ntBASIC0,46□□□□□ -2,34
Rpa1Q8VEE4 Gm22717-201ENSMUST00000122703 171 ntBASIC0,45□□□□□ -2,34
Rpa1Q8VEE4 Gm23008-201ENSMUST00000158946 80 ntBASIC0,45□□□□□ -2,34
Rpa1Q8VEE4 Gm25950-201ENSMUST00000175331 100 ntBASIC0,45□□□□□ -2,34
Rpa1Q8VEE4 Gm44328-201ENSMUST00000199331 75 ntBASIC0,45□□□□□ -2,34
Rpa1Q8VEE4 AC157278.1-201ENSMUST00000221621 148 ntBASIC0,45□□□□□ -2,34
Rpa1Q8VEE4 Gm23605-201ENSMUST00000157255 127 ntBASIC0,44□□□□□ -2,34
Rpa1Q8VEE4 Gm44458-201ENSMUST00000196594 143 ntBASIC0,44□□□□□ -2,34
Rpa1Q8VEE4 Gm45617-201ENSMUST00000211132 209 ntBASIC0,44□□□□□ -2,34
Rpa1Q8VEE4 AC238676.2-201ENSMUST00000220910 94 ntBASIC0,44□□□□□ -2,34
Rpa1Q8VEE4 Gm23060-201ENSMUST00000102345 109 ntBASIC0,43□□□□□ -2,34
Rpa1Q8VEE4 Gm25496-201ENSMUST00000104430 120 ntBASIC0,43□□□□□ -2,34
Rpa1Q8VEE4 Gm23017-201ENSMUST00000177583 72 ntBASIC0,43□□□□□ -2,34
Rpa1Q8VEE4 Gm25648-201ENSMUST00000177844 79 ntBASIC0,43□□□□□ -2,34
Rpa1Q8VEE4 Gm25186-201ENSMUST00000083909 108 ntBASIC0,43□□□□□ -2,34
Rpa1Q8VEE4 Gm22048-201ENSMUST00000104721 89 ntBASIC0,42□□□□□ -2,34
Rpa1Q8VEE4 Mir8107-201ENSMUST00000184024 117 ntBASIC0,42□□□□□ -2,34
Retrieved 100 of 76,532 protein–RNA pairs in 99,7 ms