Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm27554-201ENSMUST00000185074 98 ntBASIC0.87□□□□□ -2.27
Sh3rf3Q8C120 Gm27977-201ENSMUST00000185159 111 ntBASIC0.87□□□□□ -2.27
Sh3rf3Q8C120 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
Sh3rf3Q8C120 Mir669f-201ENSMUST00000103850 121 ntBASIC0.86□□□□□ -2.27
Sh3rf3Q8C120 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Gm25656-201ENSMUST00000158466 66 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Gm42677-201ENSMUST00000196363 127 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Gm22459-201ENSMUST00000082577 108 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Mir33-201ENSMUST00000083531 69 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Mir3071-201ENSMUST00000093621 80 ntBASIC0.85□□□□□ -2.27
Sh3rf3Q8C120 Gm25641-201ENSMUST00000175135 108 ntBASIC0.84□□□□□ -2.27
Sh3rf3Q8C120 Mir15b-201ENSMUST00000083646 64 ntBASIC0.84□□□□□ -2.27
Sh3rf3Q8C120 Gm24396-201ENSMUST00000116905 93 ntBASIC0.83□□□□□ -2.28
Sh3rf3Q8C120 Gm14533-201ENSMUST00000117088 93 ntBASIC0.83□□□□□ -2.28
Sh3rf3Q8C120 Gm22087-201ENSMUST00000158339 88 ntBASIC0.83□□□□□ -2.28
Sh3rf3Q8C120 Gm24321-201ENSMUST00000175348 80 ntBASIC0.83□□□□□ -2.28
Sh3rf3Q8C120 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.83□□□□□ -2.28
Sh3rf3Q8C120 Mir876-201ENSMUST00000104659 81 ntBASIC0.82□□□□□ -2.28
Sh3rf3Q8C120 Gm24226-201ENSMUST00000158826 97 ntBASIC0.82□□□□□ -2.28
Sh3rf3Q8C120 Gm23649-201ENSMUST00000179007 107 ntBASIC0.82□□□□□ -2.28
Sh3rf3Q8C120 Gm22720-201ENSMUST00000122710 87 ntBASIC0.81□□□□□ -2.28
Sh3rf3Q8C120 Gm23994-201ENSMUST00000158059 88 ntBASIC0.81□□□□□ -2.28
Sh3rf3Q8C120 Gm27980-201ENSMUST00000184094 169 ntBASIC0.81□□□□□ -2.28
Sh3rf3Q8C120 Mir101a-201ENSMUST00000083517 83 ntBASIC0.81□□□□□ -2.28
Sh3rf3Q8C120 Gm25183-201ENSMUST00000157752 106 ntBASIC0.8□□□□□ -2.28
Sh3rf3Q8C120 Gm38274-201ENSMUST00000195689 148 ntBASIC0.8□□□□□ -2.28
Sh3rf3Q8C120 Snord32a-201ENSMUST00000083285 83 ntBASIC0.8□□□□□ -2.28
Sh3rf3Q8C120 Gm26338-201ENSMUST00000102372 110 ntBASIC0.79□□□□□ -2.28
Sh3rf3Q8C120 Mir6904-201ENSMUST00000183443 67 ntBASIC0.79□□□□□ -2.28
Sh3rf3Q8C120 Gm44327-201ENSMUST00000200068 117 ntBASIC0.79□□□□□ -2.28
Sh3rf3Q8C120 Snord35a-201ENSMUST00000083884 90 ntBASIC0.79□□□□□ -2.28
Sh3rf3Q8C120 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Sh3rf3Q8C120 Gm26257-201ENSMUST00000122500 107 ntBASIC0.78□□□□□ -2.28
Sh3rf3Q8C120 Gm24678-201ENSMUST00000158756 104 ntBASIC0.78□□□□□ -2.28
Sh3rf3Q8C120 Gm24020-201ENSMUST00000180156 108 ntBASIC0.78□□□□□ -2.28
Sh3rf3Q8C120 Gm44455-201ENSMUST00000200061 82 ntBASIC0.78□□□□□ -2.28
Sh3rf3Q8C120 Mir141-201ENSMUST00000083540 72 ntBASIC0.78□□□□□ -2.28
Sh3rf3Q8C120 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 Gm26007-201ENSMUST00000158798 120 ntBASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 Gm25307-201ENSMUST00000158885 106 ntBASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 Mir6389-201ENSMUST00000183661 102 ntBASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 Gm24201-201ENSMUST00000082946 125 ntBASIC0.77□□□□□ -2.29
Sh3rf3Q8C120 Mir695-201ENSMUST00000102261 109 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm23072-201ENSMUST00000158243 123 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm24323-201ENSMUST00000175342 77 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm38113-201ENSMUST00000193704 201 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm44301-201ENSMUST00000200362 143 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm23735-201ENSMUST00000082551 134 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm24927-201ENSMUST00000083397 107 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm25652-201ENSMUST00000083780 103 ntBASIC0.76□□□□□ -2.29
Sh3rf3Q8C120 Gm25440-201ENSMUST00000158279 154 ntBASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 Gm25993-201ENSMUST00000175391 80 ntBASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 Gm27943-201ENSMUST00000184844 116 ntBASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 DQ267101-201ENSMUST00000082562 73 ntBASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Sh3rf3Q8C120 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.74□□□□□ -2.29
Sh3rf3Q8C120 Mir200a-201ENSMUST00000083466 90 ntBASIC0.74□□□□□ -2.29
Sh3rf3Q8C120 Gm24070-201ENSMUST00000104519 130 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Gm27450-201ENSMUST00000104632 90 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Gm24381-201ENSMUST00000122697 104 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Gm23278-201ENSMUST00000157911 143 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Gm22303-201ENSMUST00000082686 122 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Gm25705-201ENSMUST00000083119 104 ntBASIC0.73□□□□□ -2.29
Sh3rf3Q8C120 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.72□□□□□ -2.29
Sh3rf3Q8C120 Gm26285-201ENSMUST00000177923 107 ntBASIC0.72□□□□□ -2.29
Sh3rf3Q8C120 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.72□□□□□ -2.29
Sh3rf3Q8C120 Gm23622-201ENSMUST00000082460 107 ntBASIC0.72□□□□□ -2.29
Sh3rf3Q8C120 Gm25309-201ENSMUST00000116728 126 ntBASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 Gm22542-201ENSMUST00000158166 95 ntBASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 Gm23020-201ENSMUST00000158766 253 ntBASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 Gm25648-201ENSMUST00000177844 79 ntBASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.71□□□□□ -2.3
Sh3rf3Q8C120 Gm24701-201ENSMUST00000101946 105 ntBASIC0.7□□□□□ -2.3
Sh3rf3Q8C120 Gm27289-201ENSMUST00000183341 82 ntBASIC0.7□□□□□ -2.3
Sh3rf3Q8C120 Mir6364-201ENSMUST00000183396 86 ntBASIC0.7□□□□□ -2.3
Sh3rf3Q8C120 Gm42845-201ENSMUST00000197766 105 ntBASIC0.7□□□□□ -2.3
Sh3rf3Q8C120 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Gm23531-201ENSMUST00000104567 68 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Gm25885-201ENSMUST00000157779 109 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Gm25010-201ENSMUST00000158403 65 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Mir7229-201ENSMUST00000197062 53 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Gm25296-201ENSMUST00000082566 67 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.69□□□□□ -2.3
Sh3rf3Q8C120 Mir487b-201ENSMUST00000102265 82 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm24278-201ENSMUST00000104239 127 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm22039-201ENSMUST00000157278 132 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm24725-201ENSMUST00000158229 125 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm22165-201ENSMUST00000158414 103 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Mir3105-201ENSMUST00000175480 85 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm26139-201ENSMUST00000180098 107 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Gm24612-201ENSMUST00000083267 107 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Snord33-201ENSMUST00000083694 84 ntBASIC0.68□□□□□ -2.3
Sh3rf3Q8C120 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
Sh3rf3Q8C120 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.67□□□□□ -2.3
Sh3rf3Q8C120 Gm25378-201ENSMUST00000104333 129 ntBASIC0.66□□□□□ -2.3
Sh3rf3Q8C120 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms