Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27549-201ENSMUST00000183508 62 ntBASIC-2,12□□□□□ -2,75
Ccdc40Q8BI79 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-2,12□□□□□ -2,75
Ccdc40Q8BI79 Gm23017-201ENSMUST00000177583 72 ntBASIC-2,13□□□□□ -2,75
Ccdc40Q8BI79 Gm22621-201ENSMUST00000179678 74 ntBASIC-2,13□□□□□ -2,75
Ccdc40Q8BI79 Mir6957-201ENSMUST00000183708 64 ntBASIC-2,13□□□□□ -2,75
Ccdc40Q8BI79 Gm23974-201ENSMUST00000083321 131 ntBASIC-2,13□□□□□ -2,75
Ccdc40Q8BI79 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-2,14□□□□□ -2,75
Ccdc40Q8BI79 Gm26225-201ENSMUST00000082508 135 ntBASIC-2,14□□□□□ -2,75
Ccdc40Q8BI79 Gm24384-201ENSMUST00000122693 75 ntBASIC-2,15□□□□□ -2,75
Ccdc40Q8BI79 Gm22140-201ENSMUST00000158745 120 ntBASIC-2,15□□□□□ -2,75
Ccdc40Q8BI79 Gm38298-201ENSMUST00000193578 118 ntBASIC-2,15□□□□□ -2,75
Ccdc40Q8BI79 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-2,16□□□□□ -2,76
Ccdc40Q8BI79 AC165138.1-201ENSMUST00000226984 270 ntBASIC-2,17□□□□□ -2,76
Ccdc40Q8BI79 mt-Td-201ENSMUST00000082404 70 ntBASIC-2,17□□□□□ -2,76
Ccdc40Q8BI79 Gm22459-201ENSMUST00000082577 108 ntBASIC-2,17□□□□□ -2,76
Ccdc40Q8BI79 Gm24070-201ENSMUST00000104519 130 ntBASIC-2,19□□□□□ -2,76
Ccdc40Q8BI79 AC161426.1-201ENSMUST00000214137 286 ntBASIC-2,19□□□□□ -2,76
Ccdc40Q8BI79 Gm25410-201ENSMUST00000083758 137 ntBASIC-2,2□□□□□ -2,76
Ccdc40Q8BI79 Gm24701-201ENSMUST00000101946 105 ntBASIC-2,21□□□□□ -2,76
Ccdc40Q8BI79 Gm27686-201ENSMUST00000185123 91 ntBASIC-2,21□□□□□ -2,76
Ccdc40Q8BI79 Gm27937-201ENSMUST00000183605 88 ntBASIC-2,22□□□□□ -2,76
Ccdc40Q8BI79 Mir702-201ENSMUST00000102285 109 ntBASIC-2,23□□□□□ -2,77
Ccdc40Q8BI79 Gm26262-201ENSMUST00000158024 127 ntBASIC-2,23□□□□□ -2,77
Ccdc40Q8BI79 Gm24801-201ENSMUST00000178503 105 ntBASIC-2,23□□□□□ -2,77
Ccdc40Q8BI79 Gm43038-201ENSMUST00000202359 88 ntBASIC-2,23□□□□□ -2,77
Ccdc40Q8BI79 Gm44470-201ENSMUST00000203913 142 ntBASIC-2,24□□□□□ -2,77
Ccdc40Q8BI79 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2,25□□□□□ -2,77
Ccdc40Q8BI79 Gm22430-201ENSMUST00000158546 107 ntBASIC-2,26□□□□□ -2,77
Ccdc40Q8BI79 Snord123-201ENSMUST00000158692 71 ntBASIC-2,26□□□□□ -2,77
Ccdc40Q8BI79 Gm26104-201ENSMUST00000157250 108 ntBASIC-2,27□□□□□ -2,77
Ccdc40Q8BI79 Mir1898-201ENSMUST00000122643 83 ntBASIC-2,28□□□□□ -2,77
Ccdc40Q8BI79 Mir1948-201ENSMUST00000157325 85 ntBASIC-2,28□□□□□ -2,77
Ccdc40Q8BI79 Gm23316-201ENSMUST00000157997 114 ntBASIC-2,28□□□□□ -2,77
Ccdc40Q8BI79 Gm27415-201ENSMUST00000183720 95 ntBASIC-2,28□□□□□ -2,77
Ccdc40Q8BI79 Gm26125-201ENSMUST00000083357 107 ntBASIC-2,28□□□□□ -2,77
Ccdc40Q8BI79 Gm23955-201ENSMUST00000157214 100 ntBASIC-2,29□□□□□ -2,78
Ccdc40Q8BI79 Gm27928-201ENSMUST00000183747 256 ntBASIC-2,29□□□□□ -2,78
Ccdc40Q8BI79 Gm20108-201ENSMUST00000219977 153 ntBASIC-2,29□□□□□ -2,78
Ccdc40Q8BI79 Gm23607-201ENSMUST00000104550 126 ntBASIC-2,3□□□□□ -2,78
Ccdc40Q8BI79 Gm23651-201ENSMUST00000116755 120 ntBASIC-2,3□□□□□ -2,78
Ccdc40Q8BI79 Gm25653-201ENSMUST00000158473 138 ntBASIC-2,3□□□□□ -2,78
Ccdc40Q8BI79 Gm26337-201ENSMUST00000178000 79 ntBASIC-2,3□□□□□ -2,78
Ccdc40Q8BI79 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2,3□□□□□ -2,78
Ccdc40Q8BI79 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2,31□□□□□ -2,78
Ccdc40Q8BI79 Mir5117-201ENSMUST00000083226 84 ntBASIC-2,32□□□□□ -2,78
Ccdc40Q8BI79 Gm24134-201ENSMUST00000083361 71 ntBASIC-2,32□□□□□ -2,78
Ccdc40Q8BI79 Gm10351-201ENSMUST00000087694 125 ntBASIC-2,32□□□□□ -2,78
Ccdc40Q8BI79 Gm24003-201ENSMUST00000158455 100 ntBASIC-2,33□□□□□ -2,78
Ccdc40Q8BI79 Gm24612-201ENSMUST00000083267 107 ntBASIC-2,33□□□□□ -2,78
Ccdc40Q8BI79 Gm24051-201ENSMUST00000158622 75 ntBASIC-2,35□□□□□ -2,79
Ccdc40Q8BI79 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-2,36□□□□□ -2,79
Ccdc40Q8BI79 Gm25626-201ENSMUST00000177631 107 ntBASIC-2,36□□□□□ -2,79
Ccdc40Q8BI79 Mir7218-201ENSMUST00000200050 59 ntBASIC-2,36□□□□□ -2,79
Ccdc40Q8BI79 Gm25684-201ENSMUST00000083941 107 ntBASIC-2,36□□□□□ -2,79
Ccdc40Q8BI79 Gm42844-201ENSMUST00000200355 112 ntBASIC-2,37□□□□□ -2,79
Ccdc40Q8BI79 Mir451b-201ENSMUST00000196157 72 ntBASIC-2,38□□□□□ -2,79
Ccdc40Q8BI79 Gm22672-201ENSMUST00000104414 134 ntBASIC-2,39□□□□□ -2,79
Ccdc40Q8BI79 Gm23922-201ENSMUST00000178792 79 ntBASIC-2,39□□□□□ -2,79
Ccdc40Q8BI79 Gm24657-201ENSMUST00000180085 79 ntBASIC-2,39□□□□□ -2,79
Ccdc40Q8BI79 Gm22996-201ENSMUST00000180236 79 ntBASIC-2,39□□□□□ -2,79
Ccdc40Q8BI79 Gm22385-201ENSMUST00000158189 101 ntBASIC-2,4□□□□□ -2,79
Ccdc40Q8BI79 Gm26454-201ENSMUST00000082682 107 ntBASIC-2,41□□□□□ -2,8
Ccdc40Q8BI79 Snord70-201ENSMUST00000104157 87 ntBASIC-2,42□□□□□ -2,8
Ccdc40Q8BI79 Gm23173-201ENSMUST00000157161 160 ntBASIC-2,42□□□□□ -2,8
Ccdc40Q8BI79 Gm25678-201ENSMUST00000174984 73 ntBASIC-2,42□□□□□ -2,8
Ccdc40Q8BI79 Gm25915-201ENSMUST00000104265 126 ntBASIC-2,43□□□□□ -2,8
Ccdc40Q8BI79 Gm27798-201ENSMUST00000184989 71 ntBASIC-2,43□□□□□ -2,8
Ccdc40Q8BI79 Gm24201-201ENSMUST00000082946 125 ntBASIC-2,43□□□□□ -2,8
Ccdc40Q8BI79 Mir741-201ENSMUST00000103931 71 ntBASIC-2,44□□□□□ -2,8
Ccdc40Q8BI79 Gm25493-201ENSMUST00000157375 103 ntBASIC-2,44□□□□□ -2,8
Ccdc40Q8BI79 Gm25315-201ENSMUST00000116823 121 ntBASIC-2,45□□□□□ -2,8
Ccdc40Q8BI79 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2,45□□□□□ -2,8
Ccdc40Q8BI79 Gm22805-201ENSMUST00000082739 107 ntBASIC-2,45□□□□□ -2,8
Ccdc40Q8BI79 Gm25316-201ENSMUST00000116826 118 ntBASIC-2,46□□□□□ -2,8
Ccdc40Q8BI79 AC166341.8-201ENSMUST00000221267 108 ntBASIC-2,46□□□□□ -2,8
Ccdc40Q8BI79 Gm25619-201ENSMUST00000122621 104 ntBASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 Gm23421-201ENSMUST00000158934 104 ntBASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 Gm25696-201ENSMUST00000082900 105 ntBASIC-2,47□□□□□ -2,8
Ccdc40Q8BI79 Gm25417-201ENSMUST00000104212 131 ntBASIC-2,48□□□□□ -2,81
Ccdc40Q8BI79 Gm23909-201ENSMUST00000104598 131 ntBASIC-2,48□□□□□ -2,81
Ccdc40Q8BI79 Gm23852-201ENSMUST00000158376 77 ntBASIC-2,48□□□□□ -2,81
Ccdc40Q8BI79 Mir5619-201ENSMUST00000176065 61 ntBASIC-2,48□□□□□ -2,81
Ccdc40Q8BI79 Gm25229-201ENSMUST00000178587 79 ntBASIC-2,49□□□□□ -2,81
Ccdc40Q8BI79 Gm26468-201ENSMUST00000158644 106 ntBASIC-2,5□□□□□ -2,81
Ccdc40Q8BI79 Gm25641-201ENSMUST00000175135 108 ntBASIC-2,5□□□□□ -2,81
Ccdc40Q8BI79 Gm26124-201ENSMUST00000083359 108 ntBASIC-2,5□□□□□ -2,81
Ccdc40Q8BI79 Gm23335-201ENSMUST00000117021 90 ntBASIC-2,51□□□□□ -2,81
Ccdc40Q8BI79 Gm23434-201ENSMUST00000157179 100 ntBASIC-2,51□□□□□ -2,81
Ccdc40Q8BI79 Gm25440-201ENSMUST00000158279 154 ntBASIC-2,51□□□□□ -2,81
Ccdc40Q8BI79 Gm22205-201ENSMUST00000122655 71 ntBASIC-2,52□□□□□ -2,81
Ccdc40Q8BI79 Gm44322-201ENSMUST00000196830 115 ntBASIC-2,52□□□□□ -2,81
Ccdc40Q8BI79 Gm23240-201ENSMUST00000083009 121 ntBASIC-2,53□□□□□ -2,81
Ccdc40Q8BI79 Mir1969-201ENSMUST00000157623 94 ntBASIC-2,54□□□□□ -2,82
Ccdc40Q8BI79 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2,56□□□□□ -2,82
Ccdc40Q8BI79 Gm24183-201ENSMUST00000122572 93 ntBASIC-2,56□□□□□ -2,82
Ccdc40Q8BI79 Gm44859-201ENSMUST00000207831 94 ntBASIC-2,56□□□□□ -2,82
Ccdc40Q8BI79 Gm23477-201ENSMUST00000158882 128 ntBASIC-2,6□□□□□ -2,83
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms