Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22943-201ENSMUST00000158564 76 ntBASIC0.59□□□□□ -2.31
CtcfQ61164 Mir3108-201ENSMUST00000175500 79 ntBASIC0.59□□□□□ -2.31
CtcfQ61164 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
CtcfQ61164 Gm25756-201ENSMUST00000103990 136 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm25609-201ENSMUST00000104019 104 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm24988-201ENSMUST00000104460 121 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm22071-201ENSMUST00000116857 83 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm25055-201ENSMUST00000157369 76 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm22413-201ENSMUST00000175465 85 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm27549-201ENSMUST00000183508 62 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm27943-201ENSMUST00000184844 116 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm23570-201ENSMUST00000083029 104 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Gm24134-201ENSMUST00000083361 71 ntBASIC0.58□□□□□ -2.32
CtcfQ61164 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CtcfQ61164 Gm44327-201ENSMUST00000200068 117 ntBASIC0.57□□□□□ -2.32
CtcfQ61164 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.57□□□□□ -2.32
CtcfQ61164 Mir200a-201ENSMUST00000083466 90 ntBASIC0.57□□□□□ -2.32
CtcfQ61164 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.57□□□□□ -2.32
CtcfQ61164 Gm27415-201ENSMUST00000183720 95 ntBASIC0.56□□□□□ -2.32
CtcfQ61164 Gm29432-201ENSMUST00000185397 139 ntBASIC0.56□□□□□ -2.32
CtcfQ61164 Mir669h-201ENSMUST00000116944 125 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm22983-201ENSMUST00000158308 104 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm24946-201ENSMUST00000158332 106 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm23306-201ENSMUST00000179058 105 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm22069-201ENSMUST00000179911 107 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Mir7229-201ENSMUST00000197062 53 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm45688-201ENSMUST00000210002 101 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm23293-201ENSMUST00000082552 104 ntBASIC0.55□□□□□ -2.32
CtcfQ61164 Gm24047-201ENSMUST00000102405 104 ntBASIC0.54□□□□□ -2.32
CtcfQ61164 Gm25656-201ENSMUST00000158466 66 ntBASIC0.54□□□□□ -2.32
CtcfQ61164 Gm25248-201ENSMUST00000175473 98 ntBASIC0.54□□□□□ -2.32
CtcfQ61164 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.54□□□□□ -2.32
CtcfQ61164 Gm22303-201ENSMUST00000082686 122 ntBASIC0.54□□□□□ -2.32
CtcfQ61164 Gm11333-201ENSMUST00000119479 148 ntBASIC0.53□□□□□ -2.32
CtcfQ61164 Gm26007-201ENSMUST00000158798 120 ntBASIC0.53□□□□□ -2.32
CtcfQ61164 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.53□□□□□ -2.32
CtcfQ61164 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CtcfQ61164 Gm24278-201ENSMUST00000104239 127 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Gm22720-201ENSMUST00000122710 87 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Gm22962-201ENSMUST00000157962 73 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Mir3105-201ENSMUST00000175480 85 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Gm23376-201ENSMUST00000082938 160 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Mir224-201ENSMUST00000083608 82 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.52□□□□□ -2.33
CtcfQ61164 Mir741-201ENSMUST00000103931 71 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm22489-201ENSMUST00000116813 62 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm14533-201ENSMUST00000117088 93 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm24495-201ENSMUST00000178575 79 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm22253-201ENSMUST00000179870 79 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm45655-201ENSMUST00000211625 160 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm23056-201ENSMUST00000082803 111 ntBASIC0.51□□□□□ -2.33
CtcfQ61164 Gm42677-201ENSMUST00000196363 127 ntBASIC0.5□□□□□ -2.33
CtcfQ61164 Gm42845-201ENSMUST00000197766 105 ntBASIC0.5□□□□□ -2.33
CtcfQ61164 Gm23969-201ENSMUST00000083324 74 ntBASIC0.5□□□□□ -2.33
CtcfQ61164 Gm25307-201ENSMUST00000158885 106 ntBASIC0.49□□□□□ -2.33
CtcfQ61164 Gm44457-201ENSMUST00000198109 76 ntBASIC0.49□□□□□ -2.33
CtcfQ61164 Mir670-201ENSMUST00000102380 100 ntBASIC0.48□□□□□ -2.33
CtcfQ61164 Gm23672-201ENSMUST00000157471 107 ntBASIC0.48□□□□□ -2.33
CtcfQ61164 Gm25408-201ENSMUST00000104104 133 ntBASIC0.47□□□□□ -2.33
CtcfQ61164 Gm25993-201ENSMUST00000175391 80 ntBASIC0.47□□□□□ -2.33
CtcfQ61164 Mir34c-201ENSMUST00000083653 77 ntBASIC0.47□□□□□ -2.33
CtcfQ61164 Gm27937-201ENSMUST00000183605 88 ntBASIC0.46□□□□□ -2.34
CtcfQ61164 Mir7673-201ENSMUST00000184567 64 ntBASIC0.46□□□□□ -2.34
CtcfQ61164 Mir3071-201ENSMUST00000093621 80 ntBASIC0.46□□□□□ -2.34
CtcfQ61164 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CtcfQ61164 Gm44345-201ENSMUST00000199560 135 ntBASIC0.45□□□□□ -2.34
CtcfQ61164 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.45□□□□□ -2.34
CtcfQ61164 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CtcfQ61164 Gm22542-201ENSMUST00000158166 95 ntBASIC0.44□□□□□ -2.34
CtcfQ61164 Gm22239-201ENSMUST00000175220 103 ntBASIC0.44□□□□□ -2.34
CtcfQ61164 Gm20305-201ENSMUST00000193226 177 ntBASIC0.44□□□□□ -2.34
CtcfQ61164 Gm6293-201ENSMUST00000050339 195 ntBASIC0.44□□□□□ -2.34
CtcfQ61164 Gm22459-201ENSMUST00000082577 108 ntBASIC0.44□□□□□ -2.34
CtcfQ61164 Gm26303-201ENSMUST00000116845 119 ntBASIC0.43□□□□□ -2.34
CtcfQ61164 Gm45541-201ENSMUST00000210443 54 ntBASIC0.43□□□□□ -2.34
CtcfQ61164 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
CtcfQ61164 Gm24884-201ENSMUST00000158784 119 ntBASIC0.41□□□□□ -2.34
CtcfQ61164 Gm22095-201ENSMUST00000158984 150 ntBASIC0.41□□□□□ -2.34
CtcfQ61164 Mir3064-201ENSMUST00000175532 67 ntBASIC0.41□□□□□ -2.34
CtcfQ61164 Gm25296-201ENSMUST00000082566 67 ntBASIC0.41□□□□□ -2.34
CtcfQ61164 Gm22981-201ENSMUST00000082611 75 ntBASIC0.41□□□□□ -2.34
CtcfQ61164 Gm44803-201ENSMUST00000204384 156 ntBASIC0.4□□□□□ -2.35
CtcfQ61164 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.4□□□□□ -2.35
CtcfQ61164 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
CtcfQ61164 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CtcfQ61164 Gm22067-201ENSMUST00000122790 107 ntBASIC0.39□□□□□ -2.35
CtcfQ61164 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.39□□□□□ -2.35
CtcfQ61164 Gm23477-201ENSMUST00000158882 128 ntBASIC0.38□□□□□ -2.35
CtcfQ61164 Gm23726-201ENSMUST00000178937 67 ntBASIC0.38□□□□□ -2.35
CtcfQ61164 Gm27554-201ENSMUST00000185074 98 ntBASIC0.38□□□□□ -2.35
CtcfQ61164 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CtcfQ61164 Mir710-201ENSMUST00000102088 110 ntBASIC0.37□□□□□ -2.35
CtcfQ61164 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.37□□□□□ -2.35
CtcfQ61164 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.37□□□□□ -2.35
CtcfQ61164 Gm24091-201ENSMUST00000082550 83 ntBASIC0.37□□□□□ -2.35
CtcfQ61164 Gm23711-201ENSMUST00000083856 83 ntBASIC0.37□□□□□ -2.35
CtcfQ61164 Gm22087-201ENSMUST00000158339 88 ntBASIC0.36□□□□□ -2.35
CtcfQ61164 Gm25641-201ENSMUST00000175135 108 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms