Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25071-201ENSMUST00000175232 70 ntBASIC-1.13□□□□□ -2.59
Usf1Q61069 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.13□□□□□ -2.59
Usf1Q61069 Gm27549-201ENSMUST00000183508 62 ntBASIC-1.13□□□□□ -2.59
Usf1Q61069 Gm44859-201ENSMUST00000207831 94 ntBASIC-1.13□□□□□ -2.59
Usf1Q61069 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.14□□□□□ -2.59
Usf1Q61069 Gm24384-201ENSMUST00000122693 75 ntBASIC-1.14□□□□□ -2.59
Usf1Q61069 Gm25870-201ENSMUST00000179845 79 ntBASIC-1.14□□□□□ -2.59
Usf1Q61069 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.14□□□□□ -2.59
Usf1Q61069 Mir136-201ENSMUST00000199494 62 ntBASIC-1.15□□□□□ -2.59
Usf1Q61069 Gm45655-201ENSMUST00000211625 160 ntBASIC-1.15□□□□□ -2.59
Usf1Q61069 Gm23017-201ENSMUST00000177583 72 ntBASIC-1.16□□□□□ -2.6
Usf1Q61069 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.16□□□□□ -2.6
Usf1Q61069 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.16□□□□□ -2.6
Usf1Q61069 Gm22459-201ENSMUST00000082577 108 ntBASIC-1.16□□□□□ -2.6
Usf1Q61069 Mir467g-201ENSMUST00000116906 120 ntBASIC-1.17□□□□□ -2.6
Usf1Q61069 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.17□□□□□ -2.6
Usf1Q61069 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.17□□□□□ -2.6
Usf1Q61069 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.17□□□□□ -2.6
Usf1Q61069 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.17□□□□□ -2.6
Usf1Q61069 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.18□□□□□ -2.6
Usf1Q61069 Gm45125-201ENSMUST00000206908 151 ntBASIC-1.18□□□□□ -2.6
Usf1Q61069 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.18□□□□□ -2.6
Usf1Q61069 Snord57-201ENSMUST00000083338 72 ntBASIC-1.18□□□□□ -2.6
Usf1Q61069 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.19□□□□□ -2.6
Usf1Q61069 Gm26412-201ENSMUST00000157666 55 ntBASIC-1.19□□□□□ -2.6
Usf1Q61069 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.19□□□□□ -2.6
Usf1Q61069 Gm25678-201ENSMUST00000174984 73 ntBASIC-1.2□□□□□ -2.6
Usf1Q61069 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.2□□□□□ -2.6
Usf1Q61069 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.2□□□□□ -2.6
Usf1Q61069 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.21□□□□□ -2.6
Usf1Q61069 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.21□□□□□ -2.6
Usf1Q61069 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.21□□□□□ -2.6
Usf1Q61069 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.21□□□□□ -2.6
Usf1Q61069 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.21□□□□□ -2.6
Usf1Q61069 Gm22672-201ENSMUST00000104414 134 ntBASIC-1.22□□□□□ -2.6
Usf1Q61069 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.22□□□□□ -2.6
Usf1Q61069 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.22□□□□□ -2.6
Usf1Q61069 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 Gm24070-201ENSMUST00000104519 130 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 Gm23988-201ENSMUST00000117034 122 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-1.23□□□□□ -2.61
Usf1Q61069 AC164561.1-201ENSMUST00000220414 115 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 Gm10813-201ENSMUST00000099936 90 ntBASIC-1.23□□□□□ -2.61
Usf1Q61069 Gm42844-201ENSMUST00000200355 112 ntBASIC-1.24□□□□□ -2.61
Usf1Q61069 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.24□□□□□ -2.61
Usf1Q61069 Gm22297-201ENSMUST00000083312 106 ntBASIC-1.24□□□□□ -2.61
Usf1Q61069 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.25□□□□□ -2.61
Usf1Q61069 Mir7116-201ENSMUST00000195956 70 ntBASIC-1.25□□□□□ -2.61
Usf1Q61069 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.25□□□□□ -2.61
Usf1Q61069 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.26□□□□□ -2.61
Usf1Q61069 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.27□□□□□ -2.61
Usf1Q61069 Gm25646-201ENSMUST00000178527 79 ntBASIC-1.27□□□□□ -2.61
Usf1Q61069 Gm24134-201ENSMUST00000083361 71 ntBASIC-1.27□□□□□ -2.61
Usf1Q61069 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.28□□□□□ -2.61
Usf1Q61069 Gm24916-201ENSMUST00000157287 79 ntBASIC-1.28□□□□□ -2.61
Usf1Q61069 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.28□□□□□ -2.61
Usf1Q61069 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.28□□□□□ -2.61
Usf1Q61069 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.28□□□□□ -2.61
Usf1Q61069 Gm25753-201ENSMUST00000116792 121 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 Gm24001-201ENSMUST00000158463 85 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 Mir5117-201ENSMUST00000083226 84 ntBASIC-1.29□□□□□ -2.62
Usf1Q61069 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.3□□□□□ -2.62
Usf1Q61069 Gm22384-201ENSMUST00000158187 104 ntBASIC-1.3□□□□□ -2.62
Usf1Q61069 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.3□□□□□ -2.62
Usf1Q61069 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.3□□□□□ -2.62
Usf1Q61069 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.3□□□□□ -2.62
Usf1Q61069 Mir543-201ENSMUST00000102286 76 ntBASIC-1.31□□□□□ -2.62
Usf1Q61069 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.31□□□□□ -2.62
Usf1Q61069 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.31□□□□□ -2.62
Usf1Q61069 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.31□□□□□ -2.62
Usf1Q61069 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.31□□□□□ -2.62
Usf1Q61069 Mir702-201ENSMUST00000102285 109 ntBASIC-1.32□□□□□ -2.62
Usf1Q61069 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.32□□□□□ -2.62
Usf1Q61069 Gm24926-201ENSMUST00000178053 79 ntBASIC-1.32□□□□□ -2.62
Usf1Q61069 Gm22632-201ENSMUST00000178266 79 ntBASIC-1.32□□□□□ -2.62
Usf1Q61069 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.33□□□□□ -2.62
Usf1Q61069 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.33□□□□□ -2.62
Usf1Q61069 Gm22911-201ENSMUST00000177920 107 ntBASIC-1.33□□□□□ -2.62
Usf1Q61069 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.33□□□□□ -2.62
Usf1Q61069 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.33□□□□□ -2.62
Usf1Q61069 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.34□□□□□ -2.62
Usf1Q61069 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.35□□□□□ -2.63
Usf1Q61069 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.35□□□□□ -2.63
Usf1Q61069 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.35□□□□□ -2.63
Usf1Q61069 Gm22205-201ENSMUST00000122655 71 ntBASIC-1.36□□□□□ -2.63
Usf1Q61069 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
Usf1Q61069 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
Usf1Q61069 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.37□□□□□ -2.63
Usf1Q61069 Gm25696-201ENSMUST00000082900 105 ntBASIC-1.37□□□□□ -2.63
Usf1Q61069 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.38□□□□□ -2.63
Usf1Q61069 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.38□□□□□ -2.63
Usf1Q61069 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.38□□□□□ -2.63
Usf1Q61069 Mir741-201ENSMUST00000103931 71 ntBASIC-1.39□□□□□ -2.63
Usf1Q61069 Snord123-201ENSMUST00000158692 71 ntBASIC-1.39□□□□□ -2.63
Usf1Q61069 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.39□□□□□ -2.63
Usf1Q61069 mt-Tv-201ENSMUST00000082389 69 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms