Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm44457-201ENSMUST00000198109 76 ntBASIC0.55□□□□□ -2.32
Shroom1Q5SX79 Gm6293-201ENSMUST00000050339 195 ntBASIC0.55□□□□□ -2.32
Shroom1Q5SX79 Gm24445-201ENSMUST00000083981 107 ntBASIC0.55□□□□□ -2.32
Shroom1Q5SX79 Gm24555-201ENSMUST00000104548 124 ntBASIC0.54□□□□□ -2.32
Shroom1Q5SX79 Gm24288-201ENSMUST00000157630 144 ntBASIC0.54□□□□□ -2.32
Shroom1Q5SX79 Gm22340-201ENSMUST00000157717 114 ntBASIC0.54□□□□□ -2.32
Shroom1Q5SX79 Gm22983-201ENSMUST00000158308 104 ntBASIC0.54□□□□□ -2.32
Shroom1Q5SX79 Gm23056-201ENSMUST00000082803 111 ntBASIC0.54□□□□□ -2.32
Shroom1Q5SX79 Gm26007-201ENSMUST00000158798 120 ntBASIC0.53□□□□□ -2.32
Shroom1Q5SX79 Gm23376-201ENSMUST00000082938 160 ntBASIC0.53□□□□□ -2.32
Shroom1Q5SX79 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Shroom1Q5SX79 Gm25307-201ENSMUST00000158885 106 ntBASIC0.52□□□□□ -2.33
Shroom1Q5SX79 Gm25993-201ENSMUST00000175391 80 ntBASIC0.52□□□□□ -2.33
Shroom1Q5SX79 Gm25408-201ENSMUST00000104104 133 ntBASIC0.51□□□□□ -2.33
Shroom1Q5SX79 Gm22720-201ENSMUST00000122710 87 ntBASIC0.51□□□□□ -2.33
Shroom1Q5SX79 Gm22542-201ENSMUST00000158166 95 ntBASIC0.51□□□□□ -2.33
Shroom1Q5SX79 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.51□□□□□ -2.33
Shroom1Q5SX79 Mir34c-201ENSMUST00000083653 77 ntBASIC0.51□□□□□ -2.33
Shroom1Q5SX79 Mir670-201ENSMUST00000102380 100 ntBASIC0.5□□□□□ -2.33
Shroom1Q5SX79 Gm43432-201ENSMUST00000196352 121 ntBASIC0.5□□□□□ -2.33
Shroom1Q5SX79 Gm44345-201ENSMUST00000199560 135 ntBASIC0.5□□□□□ -2.33
Shroom1Q5SX79 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Shroom1Q5SX79 Gm22239-201ENSMUST00000175220 103 ntBASIC0.49□□□□□ -2.33
Shroom1Q5SX79 Gm25247-201ENSMUST00000175475 90 ntBASIC0.49□□□□□ -2.33
Shroom1Q5SX79 Mir7673-201ENSMUST00000184567 64 ntBASIC0.49□□□□□ -2.33
Shroom1Q5SX79 Gm45541-201ENSMUST00000210443 54 ntBASIC0.49□□□□□ -2.33
Shroom1Q5SX79 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Shroom1Q5SX79 Gm24772-201ENSMUST00000158507 110 ntBASIC0.48□□□□□ -2.33
Shroom1Q5SX79 Gm44828-201ENSMUST00000203745 106 ntBASIC0.48□□□□□ -2.33
Shroom1Q5SX79 Gm27937-201ENSMUST00000183605 88 ntBASIC0.47□□□□□ -2.33
Shroom1Q5SX79 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.47□□□□□ -2.33
Shroom1Q5SX79 Gm25296-201ENSMUST00000082566 67 ntBASIC0.46□□□□□ -2.34
Shroom1Q5SX79 Gm22759-201ENSMUST00000102276 96 ntBASIC0.45□□□□□ -2.34
Shroom1Q5SX79 Mir1197-201ENSMUST00000117037 120 ntBASIC0.45□□□□□ -2.34
Shroom1Q5SX79 Gm25375-201ENSMUST00000158157 135 ntBASIC0.45□□□□□ -2.34
Shroom1Q5SX79 Gm23020-201ENSMUST00000158766 253 ntBASIC0.45□□□□□ -2.34
Shroom1Q5SX79 Gm24884-201ENSMUST00000158784 119 ntBASIC0.45□□□□□ -2.34
Shroom1Q5SX79 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Shroom1Q5SX79 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Shroom1Q5SX79 Gm44803-201ENSMUST00000204384 156 ntBASIC0.44□□□□□ -2.34
Shroom1Q5SX79 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.44□□□□□ -2.34
Shroom1Q5SX79 Gm22981-201ENSMUST00000082611 75 ntBASIC0.44□□□□□ -2.34
Shroom1Q5SX79 Mir3071-201ENSMUST00000093621 80 ntBASIC0.44□□□□□ -2.34
Shroom1Q5SX79 Mir3064-201ENSMUST00000175532 67 ntBASIC0.43□□□□□ -2.34
Shroom1Q5SX79 Gm22459-201ENSMUST00000082577 108 ntBASIC0.43□□□□□ -2.34
Shroom1Q5SX79 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Shroom1Q5SX79 Gm25641-201ENSMUST00000175135 108 ntBASIC0.42□□□□□ -2.34
Shroom1Q5SX79 Gm27554-201ENSMUST00000185074 98 ntBASIC0.42□□□□□ -2.34
Shroom1Q5SX79 Mir7065-201ENSMUST00000185110 61 ntBASIC0.42□□□□□ -2.34
Shroom1Q5SX79 Gm20305-201ENSMUST00000193226 177 ntBASIC0.42□□□□□ -2.34
Shroom1Q5SX79 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.42□□□□□ -2.34
Shroom1Q5SX79 Gm26303-201ENSMUST00000116845 119 ntBASIC0.41□□□□□ -2.34
Shroom1Q5SX79 Gm27977-201ENSMUST00000185159 111 ntBASIC0.41□□□□□ -2.34
Shroom1Q5SX79 Mir18-201ENSMUST00000083469 96 ntBASIC0.41□□□□□ -2.34
Shroom1Q5SX79 Gm22067-201ENSMUST00000122790 107 ntBASIC0.4□□□□□ -2.35
Shroom1Q5SX79 Gm23726-201ENSMUST00000178937 67 ntBASIC0.4□□□□□ -2.35
Shroom1Q5SX79 Gm23477-201ENSMUST00000158882 128 ntBASIC0.39□□□□□ -2.35
Shroom1Q5SX79 Gm22095-201ENSMUST00000158984 150 ntBASIC0.39□□□□□ -2.35
Shroom1Q5SX79 Gm24378-201ENSMUST00000122699 106 ntBASIC0.38□□□□□ -2.35
Shroom1Q5SX79 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
Shroom1Q5SX79 Gm27607-201ENSMUST00000185162 122 ntBASIC0.38□□□□□ -2.35
Shroom1Q5SX79 Mir3065-201ENSMUST00000198674 87 ntBASIC0.38□□□□□ -2.35
Shroom1Q5SX79 Mir224-201ENSMUST00000083608 82 ntBASIC0.38□□□□□ -2.35
Shroom1Q5SX79 Snord67-201ENSMUST00000104033 111 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Mir876-201ENSMUST00000104659 81 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Gm27475-201ENSMUST00000183420 61 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Mir7077-201ENSMUST00000183991 57 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Shroom1Q5SX79 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Gm22455-201ENSMUST00000082580 71 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Mir363-201ENSMUST00000093598 75 ntBASIC0.37□□□□□ -2.35
Shroom1Q5SX79 Gm22540-201ENSMUST00000158168 117 ntBASIC0.36□□□□□ -2.35
Shroom1Q5SX79 Gm23761-201ENSMUST00000158347 104 ntBASIC0.36□□□□□ -2.35
Shroom1Q5SX79 Gm24070-201ENSMUST00000104519 130 ntBASIC0.35□□□□□ -2.35
Shroom1Q5SX79 Gm26485-201ENSMUST00000158019 64 ntBASIC0.35□□□□□ -2.35
Shroom1Q5SX79 Gm22087-201ENSMUST00000158339 88 ntBASIC0.35□□□□□ -2.35
Shroom1Q5SX79 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.35□□□□□ -2.35
Shroom1Q5SX79 Gm25010-201ENSMUST00000158403 65 ntBASIC0.34□□□□□ -2.36
Shroom1Q5SX79 Gm23180-201ENSMUST00000158686 125 ntBASIC0.34□□□□□ -2.36
Shroom1Q5SX79 Gm23531-201ENSMUST00000104567 68 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm25309-201ENSMUST00000116728 126 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm11966-201ENSMUST00000119907 87 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm25440-201ENSMUST00000158279 154 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Scarna8-201ENSMUST00000158333 131 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm22088-201ENSMUST00000158341 117 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Snord45b-201ENSMUST00000082797 71 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Gm24918-201ENSMUST00000083022 130 ntBASIC0.33□□□□□ -2.36
Shroom1Q5SX79 Mir710-201ENSMUST00000102088 110 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Mir669f-201ENSMUST00000103850 121 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Gm25275-201ENSMUST00000104297 129 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Gm23785-201ENSMUST00000116741 96 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Gm28001-201ENSMUST00000183561 117 ntBASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Shroom1Q5SX79 Gm24796-201ENSMUST00000104007 107 ntBASIC0.31□□□□□ -2.36
Shroom1Q5SX79 Gm23036-201ENSMUST00000157885 99 ntBASIC0.31□□□□□ -2.36
Shroom1Q5SX79 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms