Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Mir448-201ENSMUST00000083516 112 ntBASIC1.48□□□□□ -2.17
Tsr1Q5SWD9 Mir33-201ENSMUST00000083531 69 ntBASIC1.48□□□□□ -2.17
Tsr1Q5SWD9 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Tsr1Q5SWD9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Tsr1Q5SWD9 Gm25222-201ENSMUST00000158199 126 ntBASIC1.47□□□□□ -2.17
Tsr1Q5SWD9 Gm24297-201ENSMUST00000158300 68 ntBASIC1.47□□□□□ -2.17
Tsr1Q5SWD9 Gm6607-201ENSMUST00000215035 328 ntBASIC1.47□□□□□ -2.17
Tsr1Q5SWD9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.46□□□□□ -2.18
Tsr1Q5SWD9 Gm42845-201ENSMUST00000197766 105 ntBASIC1.46□□□□□ -2.18
Tsr1Q5SWD9 Gm22303-201ENSMUST00000082686 122 ntBASIC1.46□□□□□ -2.18
Tsr1Q5SWD9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Tsr1Q5SWD9 Gm25275-201ENSMUST00000104297 129 ntBASIC1.45□□□□□ -2.18
Tsr1Q5SWD9 Gm22127-201ENSMUST00000083239 106 ntBASIC1.45□□□□□ -2.18
Tsr1Q5SWD9 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.45□□□□□ -2.18
Tsr1Q5SWD9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.44□□□□□ -2.18
Tsr1Q5SWD9 Gm24555-201ENSMUST00000104548 124 ntBASIC1.44□□□□□ -2.18
Tsr1Q5SWD9 Gm44455-201ENSMUST00000200061 82 ntBASIC1.43□□□□□ -2.18
Tsr1Q5SWD9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.42□□□□□ -2.18
Tsr1Q5SWD9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.42□□□□□ -2.18
Tsr1Q5SWD9 Gm44345-201ENSMUST00000199560 135 ntBASIC1.42□□□□□ -2.18
Tsr1Q5SWD9 Snora62-201ENSMUST00000082991 149 ntBASIC1.42□□□□□ -2.18
Tsr1Q5SWD9 Gm26306-201ENSMUST00000157773 119 ntBASIC1.41□□□□□ -2.18
Tsr1Q5SWD9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Tsr1Q5SWD9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.4□□□□□ -2.19
Tsr1Q5SWD9 Gm22455-201ENSMUST00000082580 71 ntBASIC1.4□□□□□ -2.19
Tsr1Q5SWD9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Tsr1Q5SWD9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.39□□□□□ -2.19
Tsr1Q5SWD9 Gm27974-201ENSMUST00000183415 105 ntBASIC1.39□□□□□ -2.19
Tsr1Q5SWD9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.39□□□□□ -2.19
Tsr1Q5SWD9 Gm26052-201ENSMUST00000104646 84 ntBASIC1.38□□□□□ -2.19
Tsr1Q5SWD9 DQ267101-201ENSMUST00000082562 73 ntBASIC1.38□□□□□ -2.19
Tsr1Q5SWD9 Gm22357-201ENSMUST00000082882 83 ntBASIC1.38□□□□□ -2.19
Tsr1Q5SWD9 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Tsr1Q5SWD9 Gm22302-201ENSMUST00000082657 106 ntBASIC1.37□□□□□ -2.19
Tsr1Q5SWD9 Snord67-201ENSMUST00000104033 111 ntBASIC1.36□□□□□ -2.19
Tsr1Q5SWD9 Mir6364-201ENSMUST00000183396 86 ntBASIC1.35□□□□□ -2.19
Tsr1Q5SWD9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.35□□□□□ -2.19
Tsr1Q5SWD9 Gm24278-201ENSMUST00000104239 127 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Gm22485-201ENSMUST00000157990 109 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Gm25522-201ENSMUST00000158394 105 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Snord32a-201ENSMUST00000083285 83 ntBASIC1.34□□□□□ -2.19
Tsr1Q5SWD9 Mir3105-201ENSMUST00000175480 85 ntBASIC1.33□□□□□ -2.2
Tsr1Q5SWD9 Gm24678-201ENSMUST00000158756 104 ntBASIC1.32□□□□□ -2.2
Tsr1Q5SWD9 Gm26484-201ENSMUST00000158018 106 ntBASIC1.31□□□□□ -2.2
Tsr1Q5SWD9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.31□□□□□ -2.2
Tsr1Q5SWD9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.31□□□□□ -2.2
Tsr1Q5SWD9 Mir211-201ENSMUST00000083651 106 ntBASIC1.31□□□□□ -2.2
Tsr1Q5SWD9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Tsr1Q5SWD9 Gm22431-201ENSMUST00000158545 107 ntBASIC1.3□□□□□ -2.2
Tsr1Q5SWD9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.3□□□□□ -2.2
Tsr1Q5SWD9 Mir1904-201ENSMUST00000122702 80 ntBASIC1.29□□□□□ -2.2
Tsr1Q5SWD9 Gm24884-201ENSMUST00000158784 119 ntBASIC1.29□□□□□ -2.2
Tsr1Q5SWD9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Tsr1Q5SWD9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.28□□□□□ -2.2
Tsr1Q5SWD9 Mir7229-201ENSMUST00000197062 53 ntBASIC1.28□□□□□ -2.2
Tsr1Q5SWD9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.26□□□□□ -2.21
Tsr1Q5SWD9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.26□□□□□ -2.21
Tsr1Q5SWD9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.25□□□□□ -2.21
Tsr1Q5SWD9 Mir343-201ENSMUST00000102360 75 ntBASIC1.24□□□□□ -2.21
Tsr1Q5SWD9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Tsr1Q5SWD9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Tsr1Q5SWD9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.24□□□□□ -2.21
Tsr1Q5SWD9 Mir695-201ENSMUST00000102261 109 ntBASIC1.23□□□□□ -2.21
Tsr1Q5SWD9 Gm23766-201ENSMUST00000103894 80 ntBASIC1.23□□□□□ -2.21
Tsr1Q5SWD9 Snord35a-201ENSMUST00000083884 90 ntBASIC1.23□□□□□ -2.21
Tsr1Q5SWD9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm25779-201ENSMUST00000116710 95 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm22879-201ENSMUST00000082895 74 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.22□□□□□ -2.21
Tsr1Q5SWD9 Gm23173-201ENSMUST00000157161 160 ntBASIC1.21□□□□□ -2.22
Tsr1Q5SWD9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.21□□□□□ -2.22
Tsr1Q5SWD9 Mir7091-201ENSMUST00000184075 79 ntBASIC1.19□□□□□ -2.22
Tsr1Q5SWD9 Mir670-201ENSMUST00000102380 100 ntBASIC1.18□□□□□ -2.22
Tsr1Q5SWD9 Gm25408-201ENSMUST00000104104 133 ntBASIC1.18□□□□□ -2.22
Tsr1Q5SWD9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.17□□□□□ -2.22
Tsr1Q5SWD9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.17□□□□□ -2.22
Tsr1Q5SWD9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.17□□□□□ -2.22
Tsr1Q5SWD9 Gm25378-201ENSMUST00000104333 129 ntBASIC1.16□□□□□ -2.22
Tsr1Q5SWD9 Mir1955-201ENSMUST00000158014 98 ntBASIC1.16□□□□□ -2.22
Tsr1Q5SWD9 Gm23787-201ENSMUST00000122538 73 ntBASIC1.15□□□□□ -2.23
Tsr1Q5SWD9 Gm24777-201ENSMUST00000157644 107 ntBASIC1.15□□□□□ -2.23
Tsr1Q5SWD9 Gm44803-201ENSMUST00000204384 156 ntBASIC1.15□□□□□ -2.23
Tsr1Q5SWD9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1.15□□□□□ -2.23
Tsr1Q5SWD9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.14□□□□□ -2.23
Tsr1Q5SWD9 Gm27289-201ENSMUST00000183341 82 ntBASIC1.14□□□□□ -2.23
Tsr1Q5SWD9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.14□□□□□ -2.23
Tsr1Q5SWD9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Tsr1Q5SWD9 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Tsr1Q5SWD9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.13□□□□□ -2.23
Tsr1Q5SWD9 Mir3065-201ENSMUST00000198674 87 ntBASIC1.13□□□□□ -2.23
Tsr1Q5SWD9 Gm24258-201ENSMUST00000083739 133 ntBASIC1.13□□□□□ -2.23
Tsr1Q5SWD9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.12□□□□□ -2.23
Tsr1Q5SWD9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.12□□□□□ -2.23
Tsr1Q5SWD9 Mir6380-201ENSMUST00000184334 81 ntBASIC1.12□□□□□ -2.23
Tsr1Q5SWD9 Gm44457-201ENSMUST00000198109 76 ntBASIC1.12□□□□□ -2.23
Tsr1Q5SWD9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms