Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.39□□□□□ -2.63
Ccdc88aQ5SNZ0 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.39□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm28724-201ENSMUST00000186149 625 ntBASIC-1.39□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.4□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm26092-201ENSMUST00000179798 97 ntBASIC-1.4□□□□□ -2.63
Ccdc88aQ5SNZ0 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-1.4□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-1.41□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.41□□□□□ -2.63
Ccdc88aQ5SNZ0 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.41□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.41□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.41□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.41□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.41□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22205-201ENSMUST00000122655 71 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25653-201ENSMUST00000158473 138 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm26468-201ENSMUST00000158644 106 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22258-201ENSMUST00000177645 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm26032-201ENSMUST00000178535 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25210-201ENSMUST00000178813 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25157-201ENSMUST00000178914 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22046-201ENSMUST00000179027 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22941-201ENSMUST00000179630 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25471-201ENSMUST00000180126 94 ntBASIC-1.42□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm23507-201ENSMUST00000083078 107 ntBASIC-1.43□□□□□ -2.64
Ccdc88aQ5SNZ0 Snord57-201ENSMUST00000083338 72 ntBASIC-1.43□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm44322-201ENSMUST00000196830 115 ntBASIC-1.43□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22459-201ENSMUST00000082577 108 ntBASIC-1.43□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.43□□□□□ -2.64
Ccdc88aQ5SNZ0 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.44□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.44□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.44□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.45□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.45□□□□□ -2.64
Ccdc88aQ5SNZ0 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.45□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22775-201ENSMUST00000177630 120 ntBASIC-1.46□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm23569-201ENSMUST00000180120 120 ntBASIC-1.46□□□□□ -2.64
Ccdc88aQ5SNZ0 Mir5117-201ENSMUST00000083226 84 ntBASIC-1.46□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.46□□□□□ -2.64
Ccdc88aQ5SNZ0 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.46□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.47□□□□□ -2.64
Ccdc88aQ5SNZ0 Gm22621-201ENSMUST00000179678 74 ntBASIC-1.47□□□□□ -2.64
Ccdc88aQ5SNZ0 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.48□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.48□□□□□ -2.65
Ccdc88aQ5SNZ0 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.48□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm26109-201ENSMUST00000083970 70 ntBASIC-1.48□□□□□ -2.65
Ccdc88aQ5SNZ0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.48□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.49□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm24384-201ENSMUST00000122693 75 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm25071-201ENSMUST00000175232 70 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm26337-201ENSMUST00000178000 79 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.5□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.51□□□□□ -2.65
Ccdc88aQ5SNZ0 Mir1898-201ENSMUST00000122643 83 ntBASIC-1.52□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.53□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.53□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23852-201ENSMUST00000158376 77 ntBASIC-1.53□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.53□□□□□ -2.65
Ccdc88aQ5SNZ0 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm25696-201ENSMUST00000082900 105 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Mir543-201ENSMUST00000102286 76 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm25449-201ENSMUST00000179389 79 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-1.54□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.55□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.55□□□□□ -2.66
Ccdc88aQ5SNZ0 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.55□□□□□ -2.66
Ccdc88aQ5SNZ0 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.56□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.56□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.56□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.57□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.57□□□□□ -2.66
Ccdc88aQ5SNZ0 AC165138.1-201ENSMUST00000226984 270 ntBASIC-1.57□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm25646-201ENSMUST00000178527 79 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm25401-201ENSMUST00000082975 106 ntBASIC-1.58□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.59□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm23922-201ENSMUST00000178792 79 ntBASIC-1.59□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm24657-201ENSMUST00000180085 79 ntBASIC-1.59□□□□□ -2.66
Ccdc88aQ5SNZ0 Gm22996-201ENSMUST00000180236 79 ntBASIC-1.59□□□□□ -2.66
Ccdc88aQ5SNZ0 Snord70-201ENSMUST00000104157 87 ntBASIC-1.6□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.6□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.6□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.61□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.61□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm26225-201ENSMUST00000082508 135 ntBASIC-1.61□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm22297-201ENSMUST00000083312 106 ntBASIC-1.61□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.62□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm24449-201ENSMUST00000083985 106 ntBASIC-1.62□□□□□ -2.67
Ccdc88aQ5SNZ0 Mir702-201ENSMUST00000102285 109 ntBASIC-1.63□□□□□ -2.67
Ccdc88aQ5SNZ0 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.63□□□□□ -2.67
Ccdc88aQ5SNZ0 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms