Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm22775-201ENSMUST00000177630 120 ntBASIC-2.23□□□□□ -2.77
Trav8d-1Q5R1H8 Gm25158-201ENSMUST00000177681 121 ntBASIC-2.23□□□□□ -2.77
Trav8d-1Q5R1H8 Gm26229-201ENSMUST00000179699 121 ntBASIC-2.23□□□□□ -2.77
Trav8d-1Q5R1H8 Gm23569-201ENSMUST00000180120 120 ntBASIC-2.23□□□□□ -2.77
Trav8d-1Q5R1H8 Mir5117-201ENSMUST00000083226 84 ntBASIC-2.23□□□□□ -2.77
Trav8d-1Q5R1H8 Gm37889-201ENSMUST00000194174 251 ntBASIC-2.24□□□□□ -2.77
Trav8d-1Q5R1H8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-2.25□□□□□ -2.77
Trav8d-1Q5R1H8 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.25□□□□□ -2.77
Trav8d-1Q5R1H8 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.26□□□□□ -2.77
Trav8d-1Q5R1H8 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.26□□□□□ -2.77
Trav8d-1Q5R1H8 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.26□□□□□ -2.77
Trav8d-1Q5R1H8 Gm24449-201ENSMUST00000083985 106 ntBASIC-2.26□□□□□ -2.77
Trav8d-1Q5R1H8 Gm22672-201ENSMUST00000104414 134 ntBASIC-2.27□□□□□ -2.77
Trav8d-1Q5R1H8 Mir5619-201ENSMUST00000176065 61 ntBASIC-2.27□□□□□ -2.77
Trav8d-1Q5R1H8 Mir7-1-201ENSMUST00000083500 108 ntBASIC-2.28□□□□□ -2.77
Trav8d-1Q5R1H8 Gm24183-201ENSMUST00000122572 93 ntBASIC-2.29□□□□□ -2.78
Trav8d-1Q5R1H8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
Trav8d-1Q5R1H8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
Trav8d-1Q5R1H8 Gm24400-201ENSMUST00000157865 107 ntBASIC-2.3□□□□□ -2.78
Trav8d-1Q5R1H8 Gm26156-201ENSMUST00000116999 123 ntBASIC-2.31□□□□□ -2.78
Trav8d-1Q5R1H8 Gm27694-201ENSMUST00000184740 86 ntBASIC-2.31□□□□□ -2.78
Trav8d-1Q5R1H8 Gm27554-201ENSMUST00000185074 98 ntBASIC-2.31□□□□□ -2.78
Trav8d-1Q5R1H8 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.32□□□□□ -2.78
Trav8d-1Q5R1H8 Gm23977-201ENSMUST00000177871 74 ntBASIC-2.33□□□□□ -2.78
Trav8d-1Q5R1H8 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.33□□□□□ -2.78
Trav8d-1Q5R1H8 AC166341.8-201ENSMUST00000221267 108 ntBASIC-2.33□□□□□ -2.78
Trav8d-1Q5R1H8 Gm22349-201ENSMUST00000157864 107 ntBASIC-2.34□□□□□ -2.78
Trav8d-1Q5R1H8 Gm23306-201ENSMUST00000179058 105 ntBASIC-2.34□□□□□ -2.78
Trav8d-1Q5R1H8 Gm22205-201ENSMUST00000122655 71 ntBASIC-2.35□□□□□ -2.79
Trav8d-1Q5R1H8 Gm24106-201ENSMUST00000175498 127 ntBASIC-2.35□□□□□ -2.79
Trav8d-1Q5R1H8 Gm44409-201ENSMUST00000198810 166 ntBASIC-2.35□□□□□ -2.79
Trav8d-1Q5R1H8 Gm42844-201ENSMUST00000200355 112 ntBASIC-2.35□□□□□ -2.79
Trav8d-1Q5R1H8 Gm25609-201ENSMUST00000104019 104 ntBASIC-2.36□□□□□ -2.79
Trav8d-1Q5R1H8 Gm25696-201ENSMUST00000082900 105 ntBASIC-2.36□□□□□ -2.79
Trav8d-1Q5R1H8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-2.37□□□□□ -2.79
Trav8d-1Q5R1H8 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.37□□□□□ -2.79
Trav8d-1Q5R1H8 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.37□□□□□ -2.79
Trav8d-1Q5R1H8 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.37□□□□□ -2.79
Trav8d-1Q5R1H8 Gm38298-201ENSMUST00000193578 118 ntBASIC-2.38□□□□□ -2.79
Trav8d-1Q5R1H8 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.38□□□□□ -2.79
Trav8d-1Q5R1H8 Gm25964-201ENSMUST00000157171 97 ntBASIC-2.39□□□□□ -2.79
Trav8d-1Q5R1H8 Gm25862-201ENSMUST00000158250 129 ntBASIC-2.39□□□□□ -2.79
Trav8d-1Q5R1H8 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.39□□□□□ -2.79
Trav8d-1Q5R1H8 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-2.39□□□□□ -2.79
Trav8d-1Q5R1H8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-2.4□□□□□ -2.79
Trav8d-1Q5R1H8 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.4□□□□□ -2.79
Trav8d-1Q5R1H8 Gm26337-201ENSMUST00000178000 79 ntBASIC-2.4□□□□□ -2.79
Trav8d-1Q5R1H8 Gm22197-201ENSMUST00000116866 58 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Gm22413-201ENSMUST00000175465 85 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-2.41□□□□□ -2.8
Trav8d-1Q5R1H8 Gm25915-201ENSMUST00000104265 126 ntBASIC-2.42□□□□□ -2.8
Trav8d-1Q5R1H8 Gm23590-201ENSMUST00000157661 104 ntBASIC-2.42□□□□□ -2.8
Trav8d-1Q5R1H8 mt-Tt-201ENSMUST00000082422 67 ntBASIC-2.42□□□□□ -2.8
Trav8d-1Q5R1H8 Mir122-201ENSMUST00000083468 66 ntBASIC-2.43□□□□□ -2.8
Trav8d-1Q5R1H8 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-2.44□□□□□ -2.8
Trav8d-1Q5R1H8 Gm24988-201ENSMUST00000104460 121 ntBASIC-2.44□□□□□ -2.8
Trav8d-1Q5R1H8 Gm25316-201ENSMUST00000116826 118 ntBASIC-2.44□□□□□ -2.8
Trav8d-1Q5R1H8 Gm22384-201ENSMUST00000158187 104 ntBASIC-2.44□□□□□ -2.8
Trav8d-1Q5R1H8 Gm43749-201ENSMUST00000199345 352 ntBASIC-2.44□□□□□ -2.8
Trav8d-1Q5R1H8 Gm23651-201ENSMUST00000116755 120 ntBASIC-2.45□□□□□ -2.8
Trav8d-1Q5R1H8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.45□□□□□ -2.8
Trav8d-1Q5R1H8 Gm24457-201ENSMUST00000083196 105 ntBASIC-2.45□□□□□ -2.8
Trav8d-1Q5R1H8 Gm24263-201ENSMUST00000104059 107 ntBASIC-2.46□□□□□ -2.8
Trav8d-1Q5R1H8 Gm23378-201ENSMUST00000082942 107 ntBASIC-2.46□□□□□ -2.8
Trav8d-1Q5R1H8 Snord47-201ENSMUST00000083034 77 ntBASIC-2.46□□□□□ -2.8
Trav8d-1Q5R1H8 Snora2b-201ENSMUST00000084005 137 ntBASIC-2.46□□□□□ -2.8
Trav8d-1Q5R1H8 Mir466h-201ENSMUST00000104748 81 ntBASIC-2.47□□□□□ -2.8
Trav8d-1Q5R1H8 Mir367-201ENSMUST00000083479 75 ntBASIC-2.47□□□□□ -2.8
Trav8d-1Q5R1H8 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
Trav8d-1Q5R1H8 Gm25322-201ENSMUST00000122556 104 ntBASIC-2.49□□□□□ -2.81
Trav8d-1Q5R1H8 Gm22677-201ENSMUST00000116977 108 ntBASIC-2.52□□□□□ -2.81
Trav8d-1Q5R1H8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-2.53□□□□□ -2.81
Trav8d-1Q5R1H8 Gm25449-201ENSMUST00000179389 79 ntBASIC-2.54□□□□□ -2.82
Trav8d-1Q5R1H8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-2.55□□□□□ -2.82
Trav8d-1Q5R1H8 Gm25678-201ENSMUST00000174984 73 ntBASIC-2.55□□□□□ -2.82
Trav8d-1Q5R1H8 Mir6375-201ENSMUST00000197176 95 ntBASIC-2.55□□□□□ -2.82
Trav8d-1Q5R1H8 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm14837-201ENSMUST00000119688 206 ntBASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm24162-201ENSMUST00000093665 102 ntBASIC-2.56□□□□□ -2.82
Trav8d-1Q5R1H8 Gm23988-201ENSMUST00000117034 122 ntBASIC-2.57□□□□□ -2.82
Trav8d-1Q5R1H8 Gm22605-201ENSMUST00000158289 108 ntBASIC-2.57□□□□□ -2.82
Trav8d-1Q5R1H8 Gm44470-201ENSMUST00000203913 142 ntBASIC-2.57□□□□□ -2.82
Trav8d-1Q5R1H8 Gm22973-201ENSMUST00000083298 191 ntBASIC-2.57□□□□□ -2.82
Trav8d-1Q5R1H8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.57□□□□□ -2.82
Trav8d-1Q5R1H8 Gm22770-201ENSMUST00000158368 67 ntBASIC-2.58□□□□□ -2.82
Trav8d-1Q5R1H8 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.58□□□□□ -2.82
Trav8d-1Q5R1H8 Gm37746-201ENSMUST00000193249 198 ntBASIC-2.58□□□□□ -2.82
Trav8d-1Q5R1H8 Mir7231-201ENSMUST00000196252 61 ntBASIC-2.58□□□□□ -2.82
Trav8d-1Q5R1H8 Gm25798-201ENSMUST00000082641 107 ntBASIC-2.58□□□□□ -2.82
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms