Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm43038-201ENSMUST00000202359 88 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.58□□□□□ -2.5
Trim40Q3UWA4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.59□□□□□ -2.5
Trim40Q3UWA4 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm22381-201ENSMUST00000158186 107 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.6□□□□□ -2.51
Trim40Q3UWA4 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.61□□□□□ -2.51
Trim40Q3UWA4 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.62□□□□□ -2.51
Trim40Q3UWA4 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.63□□□□□ -2.51
Trim40Q3UWA4 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.64□□□□□ -2.51
Trim40Q3UWA4 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.64□□□□□ -2.51
Trim40Q3UWA4 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.65□□□□□ -2.51
Trim40Q3UWA4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.65□□□□□ -2.51
Trim40Q3UWA4 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.66□□□□□ -2.52
Trim40Q3UWA4 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.67□□□□□ -2.52
Trim40Q3UWA4 Mir741-201ENSMUST00000103931 71 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm25322-201ENSMUST00000122556 104 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.68□□□□□ -2.52
Trim40Q3UWA4 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.69□□□□□ -2.52
Trim40Q3UWA4 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.7□□□□□ -2.52
Trim40Q3UWA4 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.71□□□□□ -2.52
Trim40Q3UWA4 Mir717-201ENSMUST00000102259 109 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.72□□□□□ -2.52
Trim40Q3UWA4 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.73□□□□□ -2.53
Trim40Q3UWA4 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.74□□□□□ -2.53
Trim40Q3UWA4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.75□□□□□ -2.53
Trim40Q3UWA4 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.77□□□□□ -2.53
Trim40Q3UWA4 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.77□□□□□ -2.53
Trim40Q3UWA4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.78□□□□□ -2.53
Trim40Q3UWA4 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.79□□□□□ -2.54
Trim40Q3UWA4 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.79□□□□□ -2.54
Trim40Q3UWA4 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms