Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23245-201ENSMUST00000083370 135 ntBASIC1□□□□□ -2.25
Col8a1Q00780 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm13577-201ENSMUST00000121365 205 ntBASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm23590-201ENSMUST00000157661 104 ntBASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm22401-201ENSMUST00000174927 117 ntBASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm27980-201ENSMUST00000184094 169 ntBASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm25128-201ENSMUST00000083339 76 ntBASIC0.99□□□□□ -2.25
Col8a1Q00780 Gm24579-201ENSMUST00000103964 144 ntBASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm22340-201ENSMUST00000157717 114 ntBASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm23008-201ENSMUST00000158946 80 ntBASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Col8a1Q00780 Mir27b-201ENSMUST00000083541 73 ntBASIC0.98□□□□□ -2.25
Col8a1Q00780 Gm24400-201ENSMUST00000157865 107 ntBASIC0.97□□□□□ -2.25
Col8a1Q00780 Gm25010-201ENSMUST00000158403 65 ntBASIC0.97□□□□□ -2.25
Col8a1Q00780 Gm23630-201ENSMUST00000175292 104 ntBASIC0.97□□□□□ -2.25
Col8a1Q00780 Gm26491-201ENSMUST00000179268 121 ntBASIC0.97□□□□□ -2.25
Col8a1Q00780 Gm25138-201ENSMUST00000083248 136 ntBASIC0.97□□□□□ -2.25
Col8a1Q00780 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.96□□□□□ -2.26
Col8a1Q00780 Gm22431-201ENSMUST00000158545 107 ntBASIC0.96□□□□□ -2.26
Col8a1Q00780 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.96□□□□□ -2.26
Col8a1Q00780 Mir15a-201ENSMUST00000175266 84 ntBASIC0.95□□□□□ -2.26
Col8a1Q00780 Gm26338-201ENSMUST00000102372 110 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm22595-201ENSMUST00000104250 130 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm25309-201ENSMUST00000116728 126 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm23036-201ENSMUST00000157885 99 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm25307-201ENSMUST00000158885 106 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm24321-201ENSMUST00000175348 80 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Mir7091-201ENSMUST00000184075 79 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.94□□□□□ -2.26
Col8a1Q00780 Gm26375-201ENSMUST00000101829 106 ntBASIC0.93□□□□□ -2.26
Col8a1Q00780 Gm23321-201ENSMUST00000104465 126 ntBASIC0.93□□□□□ -2.26
Col8a1Q00780 Mir1904-201ENSMUST00000122702 80 ntBASIC0.93□□□□□ -2.26
Col8a1Q00780 Gm22980-201ENSMUST00000082608 70 ntBASIC0.93□□□□□ -2.26
Col8a1Q00780 Gm25894-201ENSMUST00000083458 75 ntBASIC0.93□□□□□ -2.26
Col8a1Q00780 Gm23126-201ENSMUST00000104260 134 ntBASIC0.92□□□□□ -2.26
Col8a1Q00780 Gm22720-201ENSMUST00000122710 87 ntBASIC0.92□□□□□ -2.26
Col8a1Q00780 Gm24996-201ENSMUST00000158390 99 ntBASIC0.92□□□□□ -2.26
Col8a1Q00780 Gm26363-201ENSMUST00000158866 83 ntBASIC0.92□□□□□ -2.26
Col8a1Q00780 Gm25993-201ENSMUST00000175391 80 ntBASIC0.92□□□□□ -2.26
Col8a1Q00780 Gm24777-201ENSMUST00000157644 107 ntBASIC0.91□□□□□ -2.26
Col8a1Q00780 Gm22485-201ENSMUST00000157990 109 ntBASIC0.91□□□□□ -2.26
Col8a1Q00780 Gm25247-201ENSMUST00000175475 90 ntBASIC0.91□□□□□ -2.26
Col8a1Q00780 Mir101a-201ENSMUST00000083517 83 ntBASIC0.91□□□□□ -2.26
Col8a1Q00780 Gm23893-201ENSMUST00000158106 134 ntBASIC0.9□□□□□ -2.27
Col8a1Q00780 Gm27943-201ENSMUST00000184844 116 ntBASIC0.9□□□□□ -2.27
Col8a1Q00780 Mir7231-201ENSMUST00000196252 61 ntBASIC0.9□□□□□ -2.27
Col8a1Q00780 Gm45125-201ENSMUST00000206908 151 ntBASIC0.9□□□□□ -2.27
Col8a1Q00780 Gm22542-201ENSMUST00000158166 95 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Gm22165-201ENSMUST00000158414 103 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Gm22074-201ENSMUST00000158595 113 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Gm24797-201ENSMUST00000178103 107 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Mir6381-201ENSMUST00000183426 87 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Gm27587-201ENSMUST00000185116 163 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 Gm44327-201ENSMUST00000200068 117 ntBASIC0.89□□□□□ -2.27
Col8a1Q00780 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.88□□□□□ -2.27
Col8a1Q00780 Gm25802-201ENSMUST00000082639 77 ntBASIC0.88□□□□□ -2.27
Col8a1Q00780 Gm25087-201ENSMUST00000101992 78 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Mir717-201ENSMUST00000102259 109 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm24555-201ENSMUST00000104548 124 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm27974-201ENSMUST00000183415 105 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm38274-201ENSMUST00000195689 148 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Mir33-201ENSMUST00000083531 69 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Mir22-201ENSMUST00000083595 95 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm24259-201ENSMUST00000083740 107 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm26467-201ENSMUST00000097257 78 ntBASIC0.87□□□□□ -2.27
Col8a1Q00780 Gm22965-201ENSMUST00000157958 101 ntBASIC0.86□□□□□ -2.27
Col8a1Q00780 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.86□□□□□ -2.27
Col8a1Q00780 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.86□□□□□ -2.27
Col8a1Q00780 Gm25296-201ENSMUST00000082566 67 ntBASIC0.86□□□□□ -2.27
Col8a1Q00780 Gm26007-201ENSMUST00000158798 120 ntBASIC0.85□□□□□ -2.27
Col8a1Q00780 Gm24920-201ENSMUST00000083018 85 ntBASIC0.85□□□□□ -2.27
Col8a1Q00780 Gm22016-201ENSMUST00000158793 114 ntBASIC0.84□□□□□ -2.27
Col8a1Q00780 Gm22474-201ENSMUST00000179407 107 ntBASIC0.84□□□□□ -2.27
Col8a1Q00780 Gm24796-201ENSMUST00000104007 107 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Gm24772-201ENSMUST00000158507 110 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Gm23020-201ENSMUST00000158766 253 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Gm44455-201ENSMUST00000200061 82 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Gm22303-201ENSMUST00000082686 122 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Snord57-201ENSMUST00000083338 72 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Mir200a-201ENSMUST00000083466 90 ntBASIC0.83□□□□□ -2.28
Col8a1Q00780 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col8a1Q00780 Gm24723-201ENSMUST00000158233 132 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 Gm27263-201ENSMUST00000184760 76 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 DQ267101-201ENSMUST00000082562 73 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 Mir23a-201ENSMUST00000083677 75 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 Gm25683-201ENSMUST00000083940 131 ntBASIC0.82□□□□□ -2.28
Col8a1Q00780 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Col8a1Q00780 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Col8a1Q00780 Snord32a-201ENSMUST00000083285 83 ntBASIC0.81□□□□□ -2.28
Col8a1Q00780 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.8□□□□□ -2.28
Col8a1Q00780 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.8□□□□□ -2.28
Col8a1Q00780 Gm23017-201ENSMUST00000177583 72 ntBASIC0.8□□□□□ -2.28
Col8a1Q00780 Mir6380-201ENSMUST00000184334 81 ntBASIC0.8□□□□□ -2.28
Col8a1Q00780 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col8a1Q00780 Gm42845-201ENSMUST00000197766 105 ntBASIC0.79□□□□□ -2.28
Col8a1Q00780 Gm24431-201ENSMUST00000104073 66 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 221.9 ms