Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1,37□□□□□ -2,19
Msx1P13297 Gm24342-201ENSMUST00000103907 104 ntBASIC1,37□□□□□ -2,19
Msx1P13297 Snord71-201ENSMUST00000104361 85 ntBASIC1,37□□□□□ -2,19
Msx1P13297 Gm24723-201ENSMUST00000158233 132 ntBASIC1,37□□□□□ -2,19
Msx1P13297 Gm44327-201ENSMUST00000200068 117 ntBASIC1,37□□□□□ -2,19
Msx1P13297 Gm23221-201ENSMUST00000158118 93 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Mir1954-201ENSMUST00000175595 86 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Mir6985-201ENSMUST00000184641 61 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Gm25296-201ENSMUST00000082566 67 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Mir101a-201ENSMUST00000083517 83 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Gm23347-201ENSMUST00000083823 82 ntBASIC1,36□□□□□ -2,19
Msx1P13297 Gm23328-201ENSMUST00000157418 132 ntBASIC1,35□□□□□ -2,19
Msx1P13297 Gm23340-201ENSMUST00000158955 123 ntBASIC1,35□□□□□ -2,19
Msx1P13297 Gm27943-201ENSMUST00000184844 116 ntBASIC1,35□□□□□ -2,19
Msx1P13297 Gm42506-201ENSMUST00000202009 150 ntBASIC1,35□□□□□ -2,19
Msx1P13297 Mir344-201ENSMUST00000083634 95 ntBASIC1,35□□□□□ -2,19
Msx1P13297 Gm25495-201ENSMUST00000104431 131 ntBASIC1,34□□□□□ -2,19
Msx1P13297 AC125190.3-201ENSMUST00000223224 121 ntBASIC1,34□□□□□ -2,19
Msx1P13297 Snord57-201ENSMUST00000083338 72 ntBASIC1,34□□□□□ -2,19
Msx1P13297 Gm25166-201ENSMUST00000158909 111 ntBASIC1,33□□□□□ -2,2
Msx1P13297 Gm27493-201ENSMUST00000184128 78 ntBASIC1,33□□□□□ -2,2
Msx1P13297 Gm27263-201ENSMUST00000184760 76 ntBASIC1,33□□□□□ -2,2
Msx1P13297 Gm27974-201ENSMUST00000183415 105 ntBASIC1,32□□□□□ -2,2
Msx1P13297 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,32□□□□□ -2,2
Msx1P13297 Gm24796-201ENSMUST00000104007 107 ntBASIC1,31□□□□□ -2,2
Msx1P13297 Gm22780-201ENSMUST00000104084 132 ntBASIC1,31□□□□□ -2,2
Msx1P13297 Gm23020-201ENSMUST00000158766 253 ntBASIC1,31□□□□□ -2,2
Msx1P13297 Gm24920-201ENSMUST00000083018 85 ntBASIC1,31□□□□□ -2,2
Msx1P13297 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1,31□□□□□ -2,2
Msx1P13297 Gm24895-201ENSMUST00000122742 74 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Snord13-201ENSMUST00000157627 104 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Gm24508-201ENSMUST00000180104 107 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Gm44458-201ENSMUST00000196594 143 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Gm44455-201ENSMUST00000200061 82 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Mir23a-201ENSMUST00000083677 75 ntBASIC1,3□□□□□ -2,2
Msx1P13297 Gm23636-201ENSMUST00000175070 95 ntBASIC1,29□□□□□ -2,2
Msx1P13297 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,29□□□□□ -2,2
Msx1P13297 Gm22565-201ENSMUST00000175540 69 ntBASIC1,29□□□□□ -2,2
Msx1P13297 Gm22746-201ENSMUST00000082494 107 ntBASIC1,29□□□□□ -2,2
Msx1P13297 Gm22298-201ENSMUST00000082662 133 ntBASIC1,28□□□□□ -2,2
Msx1P13297 Gm22559-201ENSMUST00000157329 134 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Gm23180-201ENSMUST00000158686 125 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Gm23017-201ENSMUST00000177583 72 ntBASIC1,27□□□□□ -2,21
Msx1P13297 mt-Tw-201ENSMUST00000082397 67 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Mir200a-201ENSMUST00000083466 90 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Mir196b-201ENSMUST00000083509 85 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Mir33-201ENSMUST00000083531 69 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Gm24252-201ENSMUST00000083700 132 ntBASIC1,27□□□□□ -2,21
Msx1P13297 Gm22074-201ENSMUST00000158595 113 ntBASIC1,26□□□□□ -2,21
Msx1P13297 Gm44483-201ENSMUST00000197203 97 ntBASIC1,26□□□□□ -2,21
Msx1P13297 Gm22303-201ENSMUST00000082686 122 ntBASIC1,26□□□□□ -2,21
Msx1P13297 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1,25□□□□□ -2,21
Msx1P13297 Gm25326-201ENSMUST00000101903 107 ntBASIC1,25□□□□□ -2,21
Msx1P13297 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1,25□□□□□ -2,21
Msx1P13297 Gm27711-201ENSMUST00000183802 118 ntBASIC1,25□□□□□ -2,21
Msx1P13297 Gm23494-201ENSMUST00000116830 126 ntBASIC1,24□□□□□ -2,21
Msx1P13297 Gm42845-201ENSMUST00000197766 105 ntBASIC1,24□□□□□ -2,21
Msx1P13297 DQ267101-201ENSMUST00000082562 73 ntBASIC1,24□□□□□ -2,21
Msx1P13297 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,24□□□□□ -2,21
Msx1P13297 Gm25768-201ENSMUST00000158570 98 ntBASIC1,23□□□□□ -2,21
Msx1P13297 Gm23245-201ENSMUST00000083370 135 ntBASIC1,23□□□□□ -2,21
Msx1P13297 Gm23961-201ENSMUST00000104685 97 ntBASIC1,22□□□□□ -2,21
Msx1P13297 Gm24710-201ENSMUST00000175235 101 ntBASIC1,21□□□□□ -2,22
Msx1P13297 Gm24135-201ENSMUST00000179085 101 ntBASIC1,21□□□□□ -2,22
Msx1P13297 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1,2□□□□□ -2,22
Msx1P13297 Snora62-201ENSMUST00000082991 149 ntBASIC1,2□□□□□ -2,22
Msx1P13297 Snord32a-201ENSMUST00000083285 83 ntBASIC1,2□□□□□ -2,22
Msx1P13297 Gm25275-201ENSMUST00000104297 129 ntBASIC1,19□□□□□ -2,22
Msx1P13297 Gm23955-201ENSMUST00000157214 100 ntBASIC1,19□□□□□ -2,22
Msx1P13297 Mir7063-201ENSMUST00000184158 91 ntBASIC1,19□□□□□ -2,22
Msx1P13297 n-R5s96-201ENSMUST00000082574 124 ntBASIC1,19□□□□□ -2,22
Msx1P13297 Gm22469-201ENSMUST00000104118 133 ntBASIC1,18□□□□□ -2,22
Msx1P13297 Gm23573-201ENSMUST00000104408 107 ntBASIC1,18□□□□□ -2,22
Msx1P13297 Gm26259-201ENSMUST00000104778 97 ntBASIC1,18□□□□□ -2,22
Msx1P13297 Mir6364-201ENSMUST00000183396 86 ntBASIC1,18□□□□□ -2,22
Msx1P13297 Gm22455-201ENSMUST00000082580 71 ntBASIC1,18□□□□□ -2,22
Msx1P13297 Gm24678-201ENSMUST00000158756 104 ntBASIC1,17□□□□□ -2,22
Msx1P13297 Gm44345-201ENSMUST00000199560 135 ntBASIC1,17□□□□□ -2,22
Msx1P13297 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1,16□□□□□ -2,22
Msx1P13297 Gm24278-201ENSMUST00000104239 127 ntBASIC1,16□□□□□ -2,22
Msx1P13297 Gm24555-201ENSMUST00000104548 124 ntBASIC1,16□□□□□ -2,22
Msx1P13297 Mir7663-201ENSMUST00000183950 61 ntBASIC1,16□□□□□ -2,22
Msx1P13297 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1,16□□□□□ -2,22
Msx1P13297 Gm24865-201ENSMUST00000103246 96 ntBASIC1,15□□□□□ -2,23
Msx1P13297 Gm24377-201ENSMUST00000104398 131 ntBASIC1,15□□□□□ -2,23
Msx1P13297 Mir3105-201ENSMUST00000175480 85 ntBASIC1,15□□□□□ -2,23
Msx1P13297 Gm24218-201ENSMUST00000180163 105 ntBASIC1,15□□□□□ -2,23
Msx1P13297 Mir7229-201ENSMUST00000197062 53 ntBASIC1,15□□□□□ -2,23
Msx1P13297 Mir10b-201ENSMUST00000083566 68 ntBASIC1,14□□□□□ -2,23
Msx1P13297 Mir211-201ENSMUST00000083651 106 ntBASIC1,14□□□□□ -2,23
Msx1P13297 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,12□□□□□ -2,23
Msx1P13297 Mir695-201ENSMUST00000102261 109 ntBASIC1,12□□□□□ -2,23
Msx1P13297 Snord67-201ENSMUST00000104033 111 ntBASIC1,12□□□□□ -2,23
Msx1P13297 Gm25787-201ENSMUST00000104709 92 ntBASIC1,11□□□□□ -2,23
Msx1P13297 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,11□□□□□ -2,23
Msx1P13297 Gm25222-201ENSMUST00000158199 126 ntBASIC1,11□□□□□ -2,23
Msx1P13297 Gm22980-201ENSMUST00000082608 70 ntBASIC1,11□□□□□ -2,23
Msx1P13297 Snord35a-201ENSMUST00000083884 90 ntBASIC1,11□□□□□ -2,23
Msx1P13297 Gm25506-201ENSMUST00000104339 70 ntBASIC1,1□□□□□ -2,23
Msx1P13297 Gm26052-201ENSMUST00000104646 84 ntBASIC1,09□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms