Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.44□□□□□ -2.48
Best1O88870 Mir5117-201ENSMUST00000083226 84 ntBASIC-0.44□□□□□ -2.48
Best1O88870 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.44□□□□□ -2.48
Best1O88870 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.45□□□□□ -2.48
Best1O88870 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.45□□□□□ -2.48
Best1O88870 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.45□□□□□ -2.48
Best1O88870 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.46□□□□□ -2.48
Best1O88870 Gm22770-201ENSMUST00000158368 67 ntBASIC-0.46□□□□□ -2.48
Best1O88870 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.46□□□□□ -2.48
Best1O88870 Mir141-201ENSMUST00000083540 72 ntBASIC-0.47□□□□□ -2.48
Best1O88870 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
Best1O88870 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.48□□□□□ -2.49
Best1O88870 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.49□□□□□ -2.49
Best1O88870 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.49□□□□□ -2.49
Best1O88870 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.5□□□□□ -2.49
Best1O88870 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.5□□□□□ -2.49
Best1O88870 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.5□□□□□ -2.49
Best1O88870 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Best1O88870 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.52□□□□□ -2.49
Best1O88870 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.53□□□□□ -2.49
Best1O88870 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.53□□□□□ -2.49
Best1O88870 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.53□□□□□ -2.49
Best1O88870 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.55□□□□□ -2.5
Best1O88870 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.55□□□□□ -2.5
Best1O88870 Gm26253-201ENSMUST00000122493 103 ntBASIC-0.56□□□□□ -2.5
Best1O88870 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.56□□□□□ -2.5
Best1O88870 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.56□□□□□ -2.5
Best1O88870 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.57□□□□□ -2.5
Best1O88870 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.57□□□□□ -2.5
Best1O88870 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.57□□□□□ -2.5
Best1O88870 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.57□□□□□ -2.5
Best1O88870 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.57□□□□□ -2.5
Best1O88870 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.58□□□□□ -2.5
Best1O88870 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.59□□□□□ -2.5
Best1O88870 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.59□□□□□ -2.5
Best1O88870 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.6□□□□□ -2.51
Best1O88870 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.6□□□□□ -2.51
Best1O88870 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.6□□□□□ -2.51
Best1O88870 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.61□□□□□ -2.51
Best1O88870 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.61□□□□□ -2.51
Best1O88870 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.61□□□□□ -2.51
Best1O88870 Mir183-201ENSMUST00000083685 70 ntBASIC-0.61□□□□□ -2.51
Best1O88870 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.62□□□□□ -2.51
Best1O88870 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.62□□□□□ -2.51
Best1O88870 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.62□□□□□ -2.51
Best1O88870 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.62□□□□□ -2.51
Best1O88870 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.62□□□□□ -2.51
Best1O88870 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.63□□□□□ -2.51
Best1O88870 Snora62-201ENSMUST00000082991 149 ntBASIC-0.63□□□□□ -2.51
Best1O88870 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.63□□□□□ -2.51
Best1O88870 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.64□□□□□ -2.51
Best1O88870 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.64□□□□□ -2.51
Best1O88870 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.64□□□□□ -2.51
Best1O88870 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.65□□□□□ -2.51
Best1O88870 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.65□□□□□ -2.51
Best1O88870 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.65□□□□□ -2.51
Best1O88870 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.65□□□□□ -2.51
Best1O88870 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.66□□□□□ -2.52
Best1O88870 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.66□□□□□ -2.52
Best1O88870 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.66□□□□□ -2.52
Best1O88870 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.66□□□□□ -2.52
Best1O88870 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.66□□□□□ -2.52
Best1O88870 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.67□□□□□ -2.52
Best1O88870 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.67□□□□□ -2.52
Best1O88870 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.67□□□□□ -2.52
Best1O88870 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.67□□□□□ -2.52
Best1O88870 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.68□□□□□ -2.52
Best1O88870 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.68□□□□□ -2.52
Best1O88870 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.68□□□□□ -2.52
Best1O88870 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.68□□□□□ -2.52
Best1O88870 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Gm24482-201ENSMUST00000117005 93 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.69□□□□□ -2.52
Best1O88870 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.7□□□□□ -2.52
Best1O88870 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.7□□□□□ -2.52
Best1O88870 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.7□□□□□ -2.52
Best1O88870 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.71□□□□□ -2.52
Best1O88870 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.71□□□□□ -2.52
Best1O88870 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.72□□□□□ -2.52
Best1O88870 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.72□□□□□ -2.52
Best1O88870 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.72□□□□□ -2.52
Best1O88870 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.73□□□□□ -2.53
Best1O88870 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.73□□□□□ -2.53
Best1O88870 Mir96-201ENSMUST00000083652 106 ntBASIC-0.73□□□□□ -2.53
Best1O88870 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms