Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.14□□□□□ -2.39
Vti1bO88384 Gm25854-201ENSMUST00000082792 72 ntBASIC0.14□□□□□ -2.39
Vti1bO88384 Gm22827-201ENSMUST00000083766 107 ntBASIC0.14□□□□□ -2.39
Vti1bO88384 Mir1197-201ENSMUST00000117037 120 ntBASIC0.13□□□□□ -2.39
Vti1bO88384 Gm25275-201ENSMUST00000104297 129 ntBASIC0.12□□□□□ -2.39
Vti1bO88384 Mir3967-201ENSMUST00000198710 68 ntBASIC0.12□□□□□ -2.39
Vti1bO88384 Gm25681-201ENSMUST00000083938 106 ntBASIC0.12□□□□□ -2.39
Vti1bO88384 Mir741-201ENSMUST00000103931 71 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Gm22413-201ENSMUST00000175465 85 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Gm26499-201ENSMUST00000178544 79 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Gm26096-201ENSMUST00000179084 79 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Gm25740-201ENSMUST00000180247 107 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Mir7673-201ENSMUST00000184567 64 ntBASIC0.11□□□□□ -2.39
Vti1bO88384 Gm24064-201ENSMUST00000157486 106 ntBASIC0.1□□□□□ -2.39
Vti1bO88384 Mir7077-201ENSMUST00000183991 57 ntBASIC0.1□□□□□ -2.39
Vti1bO88384 Mir200b-201ENSMUST00000083615 70 ntBASIC0.09□□□□□ -2.4
Vti1bO88384 Mir3071-201ENSMUST00000093621 80 ntBASIC0.09□□□□□ -2.4
Vti1bO88384 Gm23060-201ENSMUST00000102345 109 ntBASIC0.08□□□□□ -2.4
Vti1bO88384 Gm27937-201ENSMUST00000183605 88 ntBASIC0.08□□□□□ -2.4
Vti1bO88384 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.08□□□□□ -2.4
Vti1bO88384 Gm22368-201ENSMUST00000102416 109 ntBASIC0.07□□□□□ -2.4
Vti1bO88384 Gm22838-201ENSMUST00000158437 99 ntBASIC0.07□□□□□ -2.4
Vti1bO88384 Gm23159-201ENSMUST00000175088 77 ntBASIC0.07□□□□□ -2.4
Vti1bO88384 Snord85-201ENSMUST00000083262 73 ntBASIC0.07□□□□□ -2.4
Vti1bO88384 Gm26051-201ENSMUST00000104642 93 ntBASIC0.06□□□□□ -2.4
Vti1bO88384 Gm22459-201ENSMUST00000082577 108 ntBASIC0.06□□□□□ -2.4
Vti1bO88384 Gm25522-201ENSMUST00000158394 105 ntBASIC0.05□□□□□ -2.4
Vti1bO88384 Gm25417-201ENSMUST00000104212 131 ntBASIC0.04□□□□□ -2.4
Vti1bO88384 Gm23715-201ENSMUST00000157354 106 ntBASIC0.04□□□□□ -2.4
Vti1bO88384 Gm23761-201ENSMUST00000158347 104 ntBASIC0.04□□□□□ -2.4
Vti1bO88384 Gm23817-201ENSMUST00000158449 104 ntBASIC0.04□□□□□ -2.4
Vti1bO88384 Mir6896-201ENSMUST00000198033 73 ntBASIC0.03□□□□□ -2.4
Vti1bO88384 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.03□□□□□ -2.4
Vti1bO88384 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Vti1bO88384 Gm25496-201ENSMUST00000104430 120 ntBASIC0.02□□□□□ -2.41
Vti1bO88384 Gm22539-201ENSMUST00000158167 117 ntBASIC0.01□□□□□ -2.41
Vti1bO88384 Gm27987-201ENSMUST00000184023 93 ntBASIC0.01□□□□□ -2.41
Vti1bO88384 Gm24988-201ENSMUST00000104460 121 ntBASIC0□□□□□ -2.41
Vti1bO88384 Gm24674-201ENSMUST00000179194 104 ntBASIC0□□□□□ -2.41
Vti1bO88384 Gm23442-201ENSMUST00000082919 134 ntBASIC0□□□□□ -2.41
Vti1bO88384 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0□□□□□ -2.41
Vti1bO88384 Gm25186-201ENSMUST00000083909 108 ntBASIC0□□□□□ -2.41
Vti1bO88384 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.01□□□□□ -2.41
Vti1bO88384 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.01□□□□□ -2.41
Vti1bO88384 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.02□□□□□ -2.41
Vti1bO88384 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.02□□□□□ -2.41
Vti1bO88384 Mir382-201ENSMUST00000083494 76 ntBASIC-0.02□□□□□ -2.41
Vti1bO88384 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Vti1bO88384 Gm25010-201ENSMUST00000158403 65 ntBASIC-0.03□□□□□ -2.41
Vti1bO88384 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.03□□□□□ -2.41
Vti1bO88384 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.03□□□□□ -2.41
Vti1bO88384 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.04□□□□□ -2.42
Vti1bO88384 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.04□□□□□ -2.42
Vti1bO88384 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.04□□□□□ -2.42
Vti1bO88384 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.04□□□□□ -2.42
Vti1bO88384 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.04□□□□□ -2.42
Vti1bO88384 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.05□□□□□ -2.42
Vti1bO88384 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.05□□□□□ -2.42
Vti1bO88384 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.05□□□□□ -2.42
Vti1bO88384 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.05□□□□□ -2.42
Vti1bO88384 Mir672-201ENSMUST00000102331 100 ntBASIC-0.06□□□□□ -2.42
Vti1bO88384 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.06□□□□□ -2.42
Vti1bO88384 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.06□□□□□ -2.42
Vti1bO88384 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.07□□□□□ -2.42
Vti1bO88384 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.07□□□□□ -2.42
Vti1bO88384 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.07□□□□□ -2.42
Vti1bO88384 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.08□□□□□ -2.42
Vti1bO88384 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.08□□□□□ -2.42
Vti1bO88384 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.09□□□□□ -2.42
Vti1bO88384 Snora62-201ENSMUST00000082991 149 ntBASIC-0.09□□□□□ -2.42
Vti1bO88384 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.09□□□□□ -2.42
Vti1bO88384 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.09□□□□□ -2.42
Vti1bO88384 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.1□□□□□ -2.43
Vti1bO88384 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.1□□□□□ -2.43
Vti1bO88384 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.1□□□□□ -2.43
Vti1bO88384 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.1□□□□□ -2.43
Vti1bO88384 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.11□□□□□ -2.43
Vti1bO88384 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.11□□□□□ -2.43
Vti1bO88384 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.11□□□□□ -2.43
Vti1bO88384 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.11□□□□□ -2.43
Vti1bO88384 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.12□□□□□ -2.43
Vti1bO88384 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.13□□□□□ -2.43
Vti1bO88384 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.13□□□□□ -2.43
Vti1bO88384 Mir327-201ENSMUST00000199328 69 ntBASIC-0.13□□□□□ -2.43
Vti1bO88384 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.13□□□□□ -2.43
Vti1bO88384 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.14□□□□□ -2.43
Vti1bO88384 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.14□□□□□ -2.43
Vti1bO88384 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.14□□□□□ -2.43
Vti1bO88384 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.14□□□□□ -2.43
Vti1bO88384 Gm27645-201ENSMUST00000183348 77 ntBASIC-0.15□□□□□ -2.43
Vti1bO88384 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.16□□□□□ -2.44
Vti1bO88384 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.16□□□□□ -2.44
Vti1bO88384 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.16□□□□□ -2.44
Vti1bO88384 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.17□□□□□ -2.44
Vti1bO88384 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.17□□□□□ -2.44
Vti1bO88384 Mir191-201ENSMUST00000196210 74 ntBASIC-0.17□□□□□ -2.44
Vti1bO88384 Mir717-201ENSMUST00000102259 109 ntBASIC-0.18□□□□□ -2.44
Vti1bO88384 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.18□□□□□ -2.44
Vti1bO88384 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.18□□□□□ -2.44
Vti1bO88384 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms