Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.89□□□□□ -2.71
Sdc4O35988 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.89□□□□□ -2.71
Sdc4O35988 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.9□□□□□ -2.71
Sdc4O35988 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.9□□□□□ -2.71
Sdc4O35988 Gm23378-201ENSMUST00000082942 107 ntBASIC-1.9□□□□□ -2.71
Sdc4O35988 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.91□□□□□ -2.72
Sdc4O35988 Gm43749-201ENSMUST00000199345 352 ntBASIC-1.91□□□□□ -2.72
Sdc4O35988 Gm26156-201ENSMUST00000116999 123 ntBASIC-1.92□□□□□ -2.72
Sdc4O35988 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm44409-201ENSMUST00000198810 166 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.93□□□□□ -2.72
Sdc4O35988 Gm24106-201ENSMUST00000175498 127 ntBASIC-1.94□□□□□ -2.72
Sdc4O35988 Gm24457-201ENSMUST00000083196 105 ntBASIC-1.94□□□□□ -2.72
Sdc4O35988 Mir5117-201ENSMUST00000083226 84 ntBASIC-1.94□□□□□ -2.72
Sdc4O35988 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.95□□□□□ -2.72
Sdc4O35988 Mir494-201ENSMUST00000093632 85 ntBASIC-1.95□□□□□ -2.72
Sdc4O35988 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.96□□□□□ -2.72
Sdc4O35988 Gm38298-201ENSMUST00000193578 118 ntBASIC-1.96□□□□□ -2.72
Sdc4O35988 Mir7-1-201ENSMUST00000083500 108 ntBASIC-1.96□□□□□ -2.72
Sdc4O35988 Mir466h-201ENSMUST00000104748 81 ntBASIC-1.97□□□□□ -2.72
Sdc4O35988 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.97□□□□□ -2.72
Sdc4O35988 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.98□□□□□ -2.73
Sdc4O35988 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.98□□□□□ -2.73
Sdc4O35988 Gm22205-201ENSMUST00000122655 71 ntBASIC-1.99□□□□□ -2.73
Sdc4O35988 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.99□□□□□ -2.73
Sdc4O35988 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.99□□□□□ -2.73
Sdc4O35988 Gm25417-201ENSMUST00000104212 131 ntBASIC-2□□□□□ -2.73
Sdc4O35988 Gm24400-201ENSMUST00000157865 107 ntBASIC-2□□□□□ -2.73
Sdc4O35988 Gm22413-201ENSMUST00000175465 85 ntBASIC-2□□□□□ -2.73
Sdc4O35988 Gm28925-201ENSMUST00000188586 168 ntBASIC-2□□□□□ -2.73
Sdc4O35988 Gm27554-201ENSMUST00000185074 98 ntBASIC-2.01□□□□□ -2.73
Sdc4O35988 Gm42844-201ENSMUST00000200355 112 ntBASIC-2.01□□□□□ -2.73
Sdc4O35988 Gm24459-201ENSMUST00000082730 86 ntBASIC-2.01□□□□□ -2.73
Sdc4O35988 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.02□□□□□ -2.73
Sdc4O35988 Snord47-201ENSMUST00000083034 77 ntBASIC-2.02□□□□□ -2.73
Sdc4O35988 Gm22016-201ENSMUST00000158793 114 ntBASIC-2.03□□□□□ -2.73
Sdc4O35988 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm24263-201ENSMUST00000104059 107 ntBASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm25316-201ENSMUST00000116826 118 ntBASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm25322-201ENSMUST00000122556 104 ntBASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.04□□□□□ -2.74
Sdc4O35988 Gm25609-201ENSMUST00000104019 104 ntBASIC-2.05□□□□□ -2.74
Sdc4O35988 Gm23651-201ENSMUST00000116755 120 ntBASIC-2.05□□□□□ -2.74
Sdc4O35988 Gm25696-201ENSMUST00000082900 105 ntBASIC-2.05□□□□□ -2.74
Sdc4O35988 Gm14837-201ENSMUST00000119688 206 ntBASIC-2.06□□□□□ -2.74
Sdc4O35988 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.06□□□□□ -2.74
Sdc4O35988 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.07□□□□□ -2.74
Sdc4O35988 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.07□□□□□ -2.74
Sdc4O35988 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
Sdc4O35988 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-2.09□□□□□ -2.74
Sdc4O35988 Gm22770-201ENSMUST00000158368 67 ntBASIC-2.09□□□□□ -2.74
Sdc4O35988 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-2.09□□□□□ -2.74
Sdc4O35988 Gm44470-201ENSMUST00000203913 142 ntBASIC-2.09□□□□□ -2.74
Sdc4O35988 mt-Tt-201ENSMUST00000082422 67 ntBASIC-2.09□□□□□ -2.74
Sdc4O35988 Gm22429-201ENSMUST00000158553 130 ntBASIC-2.1□□□□□ -2.75
Sdc4O35988 Mir6375-201ENSMUST00000197176 95 ntBASIC-2.1□□□□□ -2.75
Sdc4O35988 Gm24162-201ENSMUST00000093665 102 ntBASIC-2.1□□□□□ -2.75
Sdc4O35988 Gm24988-201ENSMUST00000104460 121 ntBASIC-2.11□□□□□ -2.75
Sdc4O35988 Gm22677-201ENSMUST00000116977 108 ntBASIC-2.11□□□□□ -2.75
Sdc4O35988 Gm26337-201ENSMUST00000178000 79 ntBASIC-2.11□□□□□ -2.75
Sdc4O35988 Gm23306-201ENSMUST00000179058 105 ntBASIC-2.11□□□□□ -2.75
Sdc4O35988 Gm22605-201ENSMUST00000158289 108 ntBASIC-2.12□□□□□ -2.75
Sdc4O35988 Gm23434-201ENSMUST00000157179 100 ntBASIC-2.13□□□□□ -2.75
Sdc4O35988 Gm24750-201ENSMUST00000157843 104 ntBASIC-2.13□□□□□ -2.75
Sdc4O35988 Gm23864-201ENSMUST00000177607 107 ntBASIC-2.13□□□□□ -2.75
Sdc4O35988 Gm37746-201ENSMUST00000193249 198 ntBASIC-2.13□□□□□ -2.75
Sdc4O35988 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.14□□□□□ -2.75
Sdc4O35988 AC158537.2-201ENSMUST00000223575 150 ntBASIC-2.14□□□□□ -2.75
Sdc4O35988 Mir122-201ENSMUST00000083468 66 ntBASIC-2.14□□□□□ -2.75
Sdc4O35988 Gm22973-201ENSMUST00000083298 191 ntBASIC-2.15□□□□□ -2.75
Sdc4O35988 Gm24637-201ENSMUST00000158674 85 ntBASIC-2.16□□□□□ -2.76
Sdc4O35988 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.16□□□□□ -2.76
Sdc4O35988 Gm27975-201ENSMUST00000184400 101 ntBASIC-2.16□□□□□ -2.76
Sdc4O35988 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.16□□□□□ -2.76
Sdc4O35988 Gm26425-201ENSMUST00000122529 82 ntBASIC-2.17□□□□□ -2.76
Sdc4O35988 Gm25449-201ENSMUST00000179389 79 ntBASIC-2.17□□□□□ -2.76
Sdc4O35988 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.17□□□□□ -2.76
Sdc4O35988 Gm24946-201ENSMUST00000158332 106 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm23922-201ENSMUST00000178792 79 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm24657-201ENSMUST00000180085 79 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm22996-201ENSMUST00000180236 79 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm27332-201ENSMUST00000184893 112 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm24203-201ENSMUST00000082949 114 ntBASIC-2.18□□□□□ -2.76
Sdc4O35988 Gm24916-201ENSMUST00000157287 79 ntBASIC-2.19□□□□□ -2.76
Sdc4O35988 mt-Tv-201ENSMUST00000082389 69 ntBASIC-2.19□□□□□ -2.76
Sdc4O35988 Gm22258-201ENSMUST00000177645 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm26032-201ENSMUST00000178535 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm25210-201ENSMUST00000178813 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm25157-201ENSMUST00000178914 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm22046-201ENSMUST00000179027 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm22941-201ENSMUST00000179630 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Gm25471-201ENSMUST00000180126 94 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 Mir7231-201ENSMUST00000196252 61 ntBASIC-2.2□□□□□ -2.76
Sdc4O35988 AC161271.1-201ENSMUST00000226914 150 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 221.1 ms