Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Snord67-201ENSMUST00000104033 111 ntBASIC-0.14□□□□□ -2.43
H2afb2S4R1M3 Gm24801-201ENSMUST00000178503 105 ntBASIC-0.14□□□□□ -2.43
H2afb2S4R1M3 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.14□□□□□ -2.43
H2afb2S4R1M3 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.15□□□□□ -2.43
H2afb2S4R1M3 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.15□□□□□ -2.43
H2afb2S4R1M3 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.15□□□□□ -2.43
H2afb2S4R1M3 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.15□□□□□ -2.43
H2afb2S4R1M3 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.16□□□□□ -2.44
H2afb2S4R1M3 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm27686-201ENSMUST00000185123 91 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 mt-Tf-201ENSMUST00000082387 68 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm26456-201ENSMUST00000082831 111 ntBASIC-0.17□□□□□ -2.44
H2afb2S4R1M3 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.18□□□□□ -2.44
H2afb2S4R1M3 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.19□□□□□ -2.44
H2afb2S4R1M3 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.19□□□□□ -2.44
H2afb2S4R1M3 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm25449-201ENSMUST00000179389 79 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Mir5117-201ENSMUST00000083226 84 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm24099-201ENSMUST00000083384 107 ntBASIC-0.2□□□□□ -2.44
H2afb2S4R1M3 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.21□□□□□ -2.44
H2afb2S4R1M3 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.21□□□□□ -2.44
H2afb2S4R1M3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.22□□□□□ -2.44
H2afb2S4R1M3 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.22□□□□□ -2.44
H2afb2S4R1M3 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.22□□□□□ -2.44
H2afb2S4R1M3 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.23□□□□□ -2.45
H2afb2S4R1M3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
H2afb2S4R1M3 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.23□□□□□ -2.45
H2afb2S4R1M3 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.23□□□□□ -2.45
H2afb2S4R1M3 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
H2afb2S4R1M3 Gm22004-201ENSMUST00000101884 107 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.24□□□□□ -2.45
H2afb2S4R1M3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Mir5619-201ENSMUST00000176065 61 ntBASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.25□□□□□ -2.45
H2afb2S4R1M3 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.26□□□□□ -2.45
H2afb2S4R1M3 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.27□□□□□ -2.45
H2afb2S4R1M3 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.27□□□□□ -2.45
H2afb2S4R1M3 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.27□□□□□ -2.45
H2afb2S4R1M3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.27□□□□□ -2.45
H2afb2S4R1M3 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.28□□□□□ -2.45
H2afb2S4R1M3 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.29□□□□□ -2.46
H2afb2S4R1M3 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.29□□□□□ -2.46
H2afb2S4R1M3 Snora26-201ENSMUST00000175614 121 ntBASIC-0.29□□□□□ -2.46
H2afb2S4R1M3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.29□□□□□ -2.46
H2afb2S4R1M3 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.3□□□□□ -2.46
H2afb2S4R1M3 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.3□□□□□ -2.46
H2afb2S4R1M3 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.3□□□□□ -2.46
H2afb2S4R1M3 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.3□□□□□ -2.46
H2afb2S4R1M3 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.31□□□□□ -2.46
H2afb2S4R1M3 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.31□□□□□ -2.46
H2afb2S4R1M3 Snora62-201ENSMUST00000082991 149 ntBASIC-0.31□□□□□ -2.46
H2afb2S4R1M3 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.32□□□□□ -2.46
H2afb2S4R1M3 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.32□□□□□ -2.46
H2afb2S4R1M3 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.32□□□□□ -2.46
H2afb2S4R1M3 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.32□□□□□ -2.46
H2afb2S4R1M3 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.32□□□□□ -2.46
H2afb2S4R1M3 Mir672-201ENSMUST00000102331 100 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.33□□□□□ -2.46
H2afb2S4R1M3 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.34□□□□□ -2.46
H2afb2S4R1M3 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 196.7 ms