Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.09□□□□□ -2.42
H2afb1S4R1E0 Mir327-201ENSMUST00000199328 69 ntBASIC-0.09□□□□□ -2.42
H2afb1S4R1E0 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.09□□□□□ -2.42
H2afb1S4R1E0 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.1□□□□□ -2.43
H2afb1S4R1E0 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.1□□□□□ -2.43
H2afb1S4R1E0 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.1□□□□□ -2.43
H2afb1S4R1E0 Mir5117-201ENSMUST00000083226 84 ntBASIC-0.1□□□□□ -2.43
H2afb1S4R1E0 Snord67-201ENSMUST00000104033 111 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.11□□□□□ -2.43
H2afb1S4R1E0 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.12□□□□□ -2.43
H2afb1S4R1E0 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.12□□□□□ -2.43
H2afb1S4R1E0 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.12□□□□□ -2.43
H2afb1S4R1E0 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.13□□□□□ -2.43
H2afb1S4R1E0 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.14□□□□□ -2.43
H2afb1S4R1E0 Gm25229-201ENSMUST00000178587 79 ntBASIC-0.14□□□□□ -2.43
H2afb1S4R1E0 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.14□□□□□ -2.43
H2afb1S4R1E0 Gm23790-201ENSMUST00000083013 107 ntBASIC-0.14□□□□□ -2.43
H2afb1S4R1E0 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 Gm22605-201ENSMUST00000158289 108 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 Gm24637-201ENSMUST00000158674 85 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 Mir5619-201ENSMUST00000176065 61 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.15□□□□□ -2.43
H2afb1S4R1E0 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.16□□□□□ -2.44
H2afb1S4R1E0 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.17□□□□□ -2.44
H2afb1S4R1E0 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
H2afb1S4R1E0 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.18□□□□□ -2.44
H2afb1S4R1E0 Gm24410-201ENSMUST00000083433 107 ntBASIC-0.19□□□□□ -2.44
H2afb1S4R1E0 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm24482-201ENSMUST00000117005 93 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm22205-201ENSMUST00000122655 71 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.2□□□□□ -2.44
H2afb1S4R1E0 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.21□□□□□ -2.44
H2afb1S4R1E0 Mir382-201ENSMUST00000083494 76 ntBASIC-0.21□□□□□ -2.44
H2afb1S4R1E0 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.22□□□□□ -2.44
H2afb1S4R1E0 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.22□□□□□ -2.44
H2afb1S4R1E0 Mir3083-201ENSMUST00000175377 64 ntBASIC-0.22□□□□□ -2.44
H2afb1S4R1E0 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.22□□□□□ -2.44
H2afb1S4R1E0 Gm22677-201ENSMUST00000116977 108 ntBASIC-0.23□□□□□ -2.45
H2afb1S4R1E0 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.23□□□□□ -2.45
H2afb1S4R1E0 Gm25696-201ENSMUST00000082900 105 ntBASIC-0.23□□□□□ -2.45
H2afb1S4R1E0 Snora2b-201ENSMUST00000084005 137 ntBASIC-0.23□□□□□ -2.45
H2afb1S4R1E0 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.24□□□□□ -2.45
H2afb1S4R1E0 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.24□□□□□ -2.45
H2afb1S4R1E0 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.24□□□□□ -2.45
H2afb1S4R1E0 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.24□□□□□ -2.45
H2afb1S4R1E0 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.25□□□□□ -2.45
H2afb1S4R1E0 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.26□□□□□ -2.45
H2afb1S4R1E0 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.26□□□□□ -2.45
H2afb1S4R1E0 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.26□□□□□ -2.45
H2afb1S4R1E0 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.26□□□□□ -2.45
H2afb1S4R1E0 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.26□□□□□ -2.45
H2afb1S4R1E0 Mir741-201ENSMUST00000103931 71 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm25619-201ENSMUST00000122621 104 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Snora26-201ENSMUST00000175614 121 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm27975-201ENSMUST00000184400 101 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm26441-201ENSMUST00000082590 104 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Snora62-201ENSMUST00000082991 149 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm24134-201ENSMUST00000083361 71 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.27□□□□□ -2.45
H2afb1S4R1E0 Gm25870-201ENSMUST00000179845 79 ntBASIC-0.28□□□□□ -2.45
H2afb1S4R1E0 Gm24162-201ENSMUST00000093665 102 ntBASIC-0.28□□□□□ -2.45
H2afb1S4R1E0 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.29□□□□□ -2.46
H2afb1S4R1E0 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.29□□□□□ -2.46
H2afb1S4R1E0 Gm25964-201ENSMUST00000157171 97 ntBASIC-0.29□□□□□ -2.46
H2afb1S4R1E0 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.29□□□□□ -2.46
H2afb1S4R1E0 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.29□□□□□ -2.46
H2afb1S4R1E0 Gm23468-201ENSMUST00000157125 108 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms