Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm42677-201ENSMUST00000196363 127 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Gm26438-201ENSMUST00000082593 107 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Snord35a-201ENSMUST00000083884 90 ntBASIC1,25□□□□□ -2,21
Prpf40aQ9R1C7 Mir448-201ENSMUST00000083516 112 ntBASIC1,24□□□□□ -2,21
Prpf40aQ9R1C7 Gm12432-201ENSMUST00000119540 186 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm24378-201ENSMUST00000122699 106 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm24678-201ENSMUST00000158756 104 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm23410-201ENSMUST00000179967 107 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm22505-201ENSMUST00000082956 108 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm22363-201ENSMUST00000083100 108 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Gm23814-201ENSMUST00000083230 102 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Mir200a-201ENSMUST00000083466 90 ntBASIC1,23□□□□□ -2,21
Prpf40aQ9R1C7 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 Mir7091-201ENSMUST00000184075 79 ntBASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 Gm27980-201ENSMUST00000184094 169 ntBASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 Mir7052-201ENSMUST00000184821 65 ntBASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,22□□□□□ -2,21
Prpf40aQ9R1C7 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Gm25847-201ENSMUST00000116793 96 ntBASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Gm23826-201ENSMUST00000157394 119 ntBASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Gm26485-201ENSMUST00000158019 64 ntBASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Gm23477-201ENSMUST00000158882 128 ntBASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Mir3064-201ENSMUST00000175532 67 ntBASIC1,21□□□□□ -2,22
Prpf40aQ9R1C7 Mir695-201ENSMUST00000102261 109 ntBASIC1,2□□□□□ -2,22
Prpf40aQ9R1C7 Gm23060-201ENSMUST00000102345 109 ntBASIC1,2□□□□□ -2,22
Prpf40aQ9R1C7 Gm26301-201ENSMUST00000104813 95 ntBASIC1,2□□□□□ -2,22
Prpf40aQ9R1C7 Gm25715-201ENSMUST00000158627 125 ntBASIC1,2□□□□□ -2,22
Prpf40aQ9R1C7 Gm23636-201ENSMUST00000175070 95 ntBASIC1,2□□□□□ -2,22
Prpf40aQ9R1C7 Gm14533-201ENSMUST00000117088 93 ntBASIC1,19□□□□□ -2,22
Prpf40aQ9R1C7 Gm24624-201ENSMUST00000082617 164 ntBASIC1,19□□□□□ -2,22
Prpf40aQ9R1C7 Gm25055-201ENSMUST00000157369 76 ntBASIC1,18□□□□□ -2,22
Prpf40aQ9R1C7 Mir1954-201ENSMUST00000175595 86 ntBASIC1,18□□□□□ -2,22
Prpf40aQ9R1C7 Gm26338-201ENSMUST00000102372 110 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Gm25274-201ENSMUST00000104296 135 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Mir876-201ENSMUST00000104659 81 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Gm11966-201ENSMUST00000119907 87 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Gm23893-201ENSMUST00000158106 134 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Mir6364-201ENSMUST00000183396 86 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Gm27656-201ENSMUST00000185055 80 ntBASIC1,17□□□□□ -2,22
Prpf40aQ9R1C7 Gm25170-201ENSMUST00000104191 129 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Gm25768-201ENSMUST00000158570 98 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Mir6381-201ENSMUST00000183426 87 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Gm44455-201ENSMUST00000200061 82 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,16□□□□□ -2,22
Prpf40aQ9R1C7 Snord71-201ENSMUST00000104361 85 ntBASIC1,15□□□□□ -2,23
Prpf40aQ9R1C7 Gm24777-201ENSMUST00000157644 107 ntBASIC1,15□□□□□ -2,23
Prpf40aQ9R1C7 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1,15□□□□□ -2,23
Prpf40aQ9R1C7 Gm44327-201ENSMUST00000200068 117 ntBASIC1,15□□□□□ -2,23
Prpf40aQ9R1C7 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,15□□□□□ -2,23
Prpf40aQ9R1C7 Gm23785-201ENSMUST00000116741 96 ntBASIC1,14□□□□□ -2,23
Prpf40aQ9R1C7 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,14□□□□□ -2,23
Prpf40aQ9R1C7 Gm27554-201ENSMUST00000185074 98 ntBASIC1,13□□□□□ -2,23
Prpf40aQ9R1C7 Gm24020-201ENSMUST00000180156 108 ntBASIC1,12□□□□□ -2,23
Prpf40aQ9R1C7 Gm22303-201ENSMUST00000082686 122 ntBASIC1,12□□□□□ -2,23
Prpf40aQ9R1C7 Mir22-201ENSMUST00000083595 95 ntBASIC1,12□□□□□ -2,23
Prpf40aQ9R1C7 Gm25378-201ENSMUST00000104333 129 ntBASIC1,11□□□□□ -2,23
Prpf40aQ9R1C7 Gm23340-201ENSMUST00000158955 123 ntBASIC1,11□□□□□ -2,23
Prpf40aQ9R1C7 Gm25641-201ENSMUST00000175135 108 ntBASIC1,11□□□□□ -2,23
Prpf40aQ9R1C7 Mir362-201ENSMUST00000093592 65 ntBASIC1,11□□□□□ -2,23
Prpf40aQ9R1C7 Gm27937-201ENSMUST00000183605 88 ntBASIC1,1□□□□□ -2,23
Prpf40aQ9R1C7 Mir196b-201ENSMUST00000083509 85 ntBASIC1,1□□□□□ -2,23
Prpf40aQ9R1C7 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,09□□□□□ -2,23
Prpf40aQ9R1C7 Gm22469-201ENSMUST00000104118 133 ntBASIC1,09□□□□□ -2,23
Prpf40aQ9R1C7 Gm24288-201ENSMUST00000157630 144 ntBASIC1,09□□□□□ -2,23
Prpf40aQ9R1C7 Mir6380-201ENSMUST00000184334 81 ntBASIC1,08□□□□□ -2,24
Prpf40aQ9R1C7 Mir6394-201ENSMUST00000184738 99 ntBASIC1,08□□□□□ -2,24
Prpf40aQ9R1C7 Gm27587-201ENSMUST00000185116 163 ntBASIC1,08□□□□□ -2,24
Prpf40aQ9R1C7 Snord33-201ENSMUST00000083694 84 ntBASIC1,08□□□□□ -2,24
Prpf40aQ9R1C7 Gm24278-201ENSMUST00000104239 127 ntBASIC1,07□□□□□ -2,24
Prpf40aQ9R1C7 Gm22542-201ENSMUST00000158166 95 ntBASIC1,07□□□□□ -2,24
Prpf40aQ9R1C7 Gm25354-201ENSMUST00000179110 105 ntBASIC1,07□□□□□ -2,24
Prpf40aQ9R1C7 Mir7673-201ENSMUST00000184567 64 ntBASIC1,07□□□□□ -2,24
Prpf40aQ9R1C7 Gm24431-201ENSMUST00000104073 66 ntBASIC1,06□□□□□ -2,24
Prpf40aQ9R1C7 Gm25307-201ENSMUST00000158885 106 ntBASIC1,06□□□□□ -2,24
Prpf40aQ9R1C7 Gm25993-201ENSMUST00000175391 80 ntBASIC1,06□□□□□ -2,24
Prpf40aQ9R1C7 Gm27977-201ENSMUST00000185159 111 ntBASIC1,06□□□□□ -2,24
Prpf40aQ9R1C7 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Gm22565-201ENSMUST00000175540 69 ntBASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Gm38274-201ENSMUST00000195689 148 ntBASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Mir7229-201ENSMUST00000197062 53 ntBASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Snord45b-201ENSMUST00000082797 71 ntBASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Gm25683-201ENSMUST00000083940 131 ntBASIC1,05□□□□□ -2,24
Prpf40aQ9R1C7 Gm25950-201ENSMUST00000175331 100 ntBASIC1,04□□□□□ -2,24
Prpf40aQ9R1C7 Mir3105-201ENSMUST00000175480 85 ntBASIC1,04□□□□□ -2,24
Prpf40aQ9R1C7 Gm27289-201ENSMUST00000183341 82 ntBASIC1,04□□□□□ -2,24
Prpf40aQ9R1C7 Mir200b-201ENSMUST00000083615 70 ntBASIC1,04□□□□□ -2,24
Prpf40aQ9R1C7 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,03□□□□□ -2,24
Prpf40aQ9R1C7 Gm42506-201ENSMUST00000202009 150 ntBASIC1,03□□□□□ -2,24
Prpf40aQ9R1C7 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,03□□□□□ -2,24
Prpf40aQ9R1C7 Gm22459-201ENSMUST00000082577 108 ntBASIC1,03□□□□□ -2,24
Prpf40aQ9R1C7 Mir297-1-201ENSMUST00000103800 76 ntBASIC1,02□□□□□ -2,25
Prpf40aQ9R1C7 Gm24342-201ENSMUST00000103907 104 ntBASIC1,02□□□□□ -2,25
Prpf40aQ9R1C7 AC125190.3-201ENSMUST00000223224 121 ntBASIC1,02□□□□□ -2,25
Prpf40aQ9R1C7 Mir344-201ENSMUST00000083634 95 ntBASIC1,02□□□□□ -2,25
Prpf40aQ9R1C7 Mir6985-201ENSMUST00000184641 61 ntBASIC1,01□□□□□ -2,25
Prpf40aQ9R1C7 Gm44345-201ENSMUST00000199560 135 ntBASIC1,01□□□□□ -2,25
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms