Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm25756-201ENSMUST00000103990 136 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 Gm25495-201ENSMUST00000104431 131 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 Gm22559-201ENSMUST00000157329 134 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 Gm23477-201ENSMUST00000158882 128 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 Gm22652-201ENSMUST00000083207 131 ntBASIC0.9□□□□□ -2.27
Shroom3Q9QXN0 Gm11966-201ENSMUST00000119907 87 ntBASIC0.89□□□□□ -2.27
Shroom3Q9QXN0 Gm23500-201ENSMUST00000157735 98 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm23306-201ENSMUST00000179058 105 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Mir7673-201ENSMUST00000184567 64 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm27607-201ENSMUST00000185162 122 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm29432-201ENSMUST00000185397 139 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Mir27b-201ENSMUST00000083541 73 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Mir709-201ENSMUST00000102190 88 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm24494-201ENSMUST00000083804 81 ntBASIC0.88□□□□□ -2.27
Shroom3Q9QXN0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Shroom3Q9QXN0 Gm25622-201ENSMUST00000157217 104 ntBASIC0.87□□□□□ -2.27
Shroom3Q9QXN0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.87□□□□□ -2.27
Shroom3Q9QXN0 Mir3064-201ENSMUST00000175532 67 ntBASIC0.87□□□□□ -2.27
Shroom3Q9QXN0 Mir324-201ENSMUST00000083600 89 ntBASIC0.87□□□□□ -2.27
Shroom3Q9QXN0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm20386-201ENSMUST00000174010 132 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm23726-201ENSMUST00000178937 67 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm25354-201ENSMUST00000179110 105 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm27549-201ENSMUST00000183508 62 ntBASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Shroom3Q9QXN0 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm24431-201ENSMUST00000104073 66 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Mir1904-201ENSMUST00000122702 80 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm27974-201ENSMUST00000183415 105 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Mir500-201ENSMUST00000093600 92 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm25552-201ENSMUST00000158081 91 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm22203-201ENSMUST00000158605 58 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm22663-201ENSMUST00000158721 102 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm24331-201ENSMUST00000175099 67 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm23801-201ENSMUST00000175561 67 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm24485-201ENSMUST00000178283 67 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Mir6342-201ENSMUST00000183870 125 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm27587-201ENSMUST00000185116 163 ntBASIC0.85□□□□□ -2.27
Shroom3Q9QXN0 Gm25040-201ENSMUST00000103877 66 ntBASIC0.84□□□□□ -2.28
Shroom3Q9QXN0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.84□□□□□ -2.28
Shroom3Q9QXN0 Gm24321-201ENSMUST00000175348 80 ntBASIC0.84□□□□□ -2.28
Shroom3Q9QXN0 Gm23012-201ENSMUST00000104149 83 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm25247-201ENSMUST00000175475 90 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm20305-201ENSMUST00000193226 177 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm22406-201ENSMUST00000174923 93 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Mir7091-201ENSMUST00000184075 79 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 Gm24134-201ENSMUST00000083361 71 ntBASIC0.83□□□□□ -2.28
Shroom3Q9QXN0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.82□□□□□ -2.28
Shroom3Q9QXN0 Gm25683-201ENSMUST00000083940 131 ntBASIC0.82□□□□□ -2.28
Shroom3Q9QXN0 Gm23321-201ENSMUST00000104465 126 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm23180-201ENSMUST00000158686 125 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm45655-201ENSMUST00000211625 160 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Mir126a-201ENSMUST00000083606 73 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Mir653-201ENSMUST00000102402 85 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.81□□□□□ -2.28
Shroom3Q9QXN0 Gm25440-201ENSMUST00000158279 154 ntBASIC0.8□□□□□ -2.28
Shroom3Q9QXN0 Gm23853-201ENSMUST00000158375 104 ntBASIC0.8□□□□□ -2.28
Shroom3Q9QXN0 Mir7010-201ENSMUST00000183464 63 ntBASIC0.8□□□□□ -2.28
Shroom3Q9QXN0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.8□□□□□ -2.28
Shroom3Q9QXN0 Gm24555-201ENSMUST00000104548 124 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Gm25300-201ENSMUST00000175284 84 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Mir1949-202ENSMUST00000199259 70 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Gm24580-201ENSMUST00000103965 131 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Gm24378-201ENSMUST00000122699 106 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Gm24500-201ENSMUST00000158447 124 ntBASIC0.79□□□□□ -2.28
Shroom3Q9QXN0 Gm22074-201ENSMUST00000158595 113 ntBASIC0.78□□□□□ -2.28
Shroom3Q9QXN0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Shroom3Q9QXN0 Gm22078-201ENSMUST00000157593 103 ntBASIC0.77□□□□□ -2.29
Shroom3Q9QXN0 Gm23278-201ENSMUST00000157911 143 ntBASIC0.77□□□□□ -2.29
Shroom3Q9QXN0 Gm25375-201ENSMUST00000158157 135 ntBASIC0.77□□□□□ -2.29
Shroom3Q9QXN0 Snord45b-201ENSMUST00000082797 71 ntBASIC0.77□□□□□ -2.29
Shroom3Q9QXN0 Gm24920-201ENSMUST00000083018 85 ntBASIC0.77□□□□□ -2.29
Shroom3Q9QXN0 Gm24233-201ENSMUST00000104317 122 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Mir141-201ENSMUST00000083540 72 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Snord35a-201ENSMUST00000083884 90 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Gm26438-201ENSMUST00000082593 107 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.76□□□□□ -2.29
Shroom3Q9QXN0 Mir876-201ENSMUST00000104659 81 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Gm22087-201ENSMUST00000158339 88 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Mir3109-201ENSMUST00000175301 88 ntBASIC0.75□□□□□ -2.29
Shroom3Q9QXN0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 165.7 ms