Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm24701-201ENSMUST00000101946 105 ntBASIC-2.22□□□□□ -2.76
Trem3Q9JKE1 Gm22165-201ENSMUST00000158414 103 ntBASIC-2.23□□□□□ -2.77
Trem3Q9JKE1 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.23□□□□□ -2.77
Trem3Q9JKE1 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.24□□□□□ -2.77
Trem3Q9JKE1 Gm27465-201ENSMUST00000184290 91 ntBASIC-2.24□□□□□ -2.77
Trem3Q9JKE1 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.24□□□□□ -2.77
Trem3Q9JKE1 Gm22606-201ENSMUST00000158290 103 ntBASIC-2.25□□□□□ -2.77
Trem3Q9JKE1 Gm24225-201ENSMUST00000158825 98 ntBASIC-2.25□□□□□ -2.77
Trem3Q9JKE1 Gm23017-201ENSMUST00000177583 72 ntBASIC-2.25□□□□□ -2.77
Trem3Q9JKE1 Gm26498-201ENSMUST00000177799 79 ntBASIC-2.25□□□□□ -2.77
Trem3Q9JKE1 Gm26230-201ENSMUST00000180141 79 ntBASIC-2.25□□□□□ -2.77
Trem3Q9JKE1 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.26□□□□□ -2.77
Trem3Q9JKE1 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.27□□□□□ -2.77
Trem3Q9JKE1 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.27□□□□□ -2.77
Trem3Q9JKE1 Gm23003-201ENSMUST00000179948 107 ntBASIC-2.27□□□□□ -2.77
Trem3Q9JKE1 Gm45655-201ENSMUST00000211625 160 ntBASIC-2.27□□□□□ -2.77
Trem3Q9JKE1 Mir702-201ENSMUST00000102285 109 ntBASIC-2.28□□□□□ -2.77
Trem3Q9JKE1 Gm26204-201ENSMUST00000082906 107 ntBASIC-2.28□□□□□ -2.77
Trem3Q9JKE1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
Trem3Q9JKE1 Gm25889-201ENSMUST00000157775 107 ntBASIC-2.29□□□□□ -2.78
Trem3Q9JKE1 Gm22459-201ENSMUST00000082577 108 ntBASIC-2.29□□□□□ -2.78
Trem3Q9JKE1 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.3□□□□□ -2.78
Trem3Q9JKE1 Gm24070-201ENSMUST00000104519 130 ntBASIC-2.3□□□□□ -2.78
Trem3Q9JKE1 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.3□□□□□ -2.78
Trem3Q9JKE1 Gm22196-201ENSMUST00000116865 109 ntBASIC-2.31□□□□□ -2.78
Trem3Q9JKE1 Gm25887-201ENSMUST00000157777 84 ntBASIC-2.31□□□□□ -2.78
Trem3Q9JKE1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.31□□□□□ -2.78
Trem3Q9JKE1 Gm27549-201ENSMUST00000183508 62 ntBASIC-2.32□□□□□ -2.78
Trem3Q9JKE1 Gm22989-201ENSMUST00000158313 86 ntBASIC-2.33□□□□□ -2.78
Trem3Q9JKE1 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 Gm26426-201ENSMUST00000177866 123 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 Gm26060-201ENSMUST00000180094 123 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 Gm27937-201ENSMUST00000183605 88 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 Mir6237-201ENSMUST00000183808 91 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 mt-Tr-201ENSMUST00000082412 68 ntBASIC-2.34□□□□□ -2.78
Trem3Q9JKE1 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.35□□□□□ -2.79
Trem3Q9JKE1 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.35□□□□□ -2.79
Trem3Q9JKE1 Gm43977-201ENSMUST00000203970 189 ntBASIC-2.35□□□□□ -2.79
Trem3Q9JKE1 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.35□□□□□ -2.79
Trem3Q9JKE1 Gm22699-201ENSMUST00000175376 105 ntBASIC-2.36□□□□□ -2.79
Trem3Q9JKE1 AC109214.2-201ENSMUST00000220089 358 ntBASIC-2.36□□□□□ -2.79
Trem3Q9JKE1 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.36□□□□□ -2.79
Trem3Q9JKE1 Snord78-201ENSMUST00000104032 66 ntBASIC-2.37□□□□□ -2.79
Trem3Q9JKE1 Gm23507-201ENSMUST00000083078 107 ntBASIC-2.37□□□□□ -2.79
Trem3Q9JKE1 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
Trem3Q9JKE1 Gm27415-201ENSMUST00000183720 95 ntBASIC-2.39□□□□□ -2.79
Trem3Q9JKE1 Gm18502-201ENSMUST00000218679 199 ntBASIC-2.39□□□□□ -2.79
Trem3Q9JKE1 Mir122-201ENSMUST00000083468 66 ntBASIC-2.39□□□□□ -2.79
Trem3Q9JKE1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Gm23607-201ENSMUST00000104550 126 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Mir1948-201ENSMUST00000157325 85 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Gm24947-201ENSMUST00000158334 110 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.4□□□□□ -2.79
Trem3Q9JKE1 Gm24131-201ENSMUST00000158539 107 ntBASIC-2.45□□□□□ -2.8
Trem3Q9JKE1 Mir471-201ENSMUST00000093596 67 ntBASIC-2.45□□□□□ -2.8
Trem3Q9JKE1 Gm24717-201ENSMUST00000157522 124 ntBASIC-2.46□□□□□ -2.8
Trem3Q9JKE1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-2.46□□□□□ -2.8
Trem3Q9JKE1 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.46□□□□□ -2.8
Trem3Q9JKE1 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.47□□□□□ -2.8
Trem3Q9JKE1 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.48□□□□□ -2.81
Trem3Q9JKE1 Gm25716-201ENSMUST00000158628 104 ntBASIC-2.48□□□□□ -2.81
Trem3Q9JKE1 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.49□□□□□ -2.81
Trem3Q9JKE1 Mir466e-201ENSMUST00000198862 84 ntBASIC-2.49□□□□□ -2.81
Trem3Q9JKE1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-2.49□□□□□ -2.81
Trem3Q9JKE1 Gm23909-201ENSMUST00000104598 131 ntBASIC-2.5□□□□□ -2.81
Trem3Q9JKE1 Gm24384-201ENSMUST00000122693 75 ntBASIC-2.5□□□□□ -2.81
Trem3Q9JKE1 Gm43324-201ENSMUST00000197482 289 ntBASIC-2.5□□□□□ -2.81
Trem3Q9JKE1 Gm24134-201ENSMUST00000083361 71 ntBASIC-2.5□□□□□ -2.81
Trem3Q9JKE1 Gm25623-201ENSMUST00000157216 108 ntBASIC-2.51□□□□□ -2.81
Trem3Q9JKE1 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.51□□□□□ -2.81
Trem3Q9JKE1 Gm24842-201ENSMUST00000158681 54 ntBASIC-2.51□□□□□ -2.81
Trem3Q9JKE1 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.51□□□□□ -2.81
Trem3Q9JKE1 Gm24927-201ENSMUST00000083397 107 ntBASIC-2.51□□□□□ -2.81
Trem3Q9JKE1 Mir669b-201ENSMUST00000102172 97 ntBASIC-2.52□□□□□ -2.81
Trem3Q9JKE1 Gm37845-201ENSMUST00000194977 355 ntBASIC-2.52□□□□□ -2.81
Trem3Q9JKE1 Gm26051-201ENSMUST00000104642 93 ntBASIC-2.53□□□□□ -2.81
Trem3Q9JKE1 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.53□□□□□ -2.81
Trem3Q9JKE1 Gm25482-201ENSMUST00000083225 107 ntBASIC-2.53□□□□□ -2.81
Trem3Q9JKE1 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.54□□□□□ -2.82
Trem3Q9JKE1 Gm13339-201ENSMUST00000120651 510 ntBASIC-2.54□□□□□ -2.82
Trem3Q9JKE1 Gm25978-201ENSMUST00000158698 90 ntBASIC-2.54□□□□□ -2.82
Trem3Q9JKE1 Gm22140-201ENSMUST00000158745 120 ntBASIC-2.54□□□□□ -2.82
Trem3Q9JKE1 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.54□□□□□ -2.82
Trem3Q9JKE1 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.57□□□□□ -2.82
Trem3Q9JKE1 Gm25229-201ENSMUST00000178587 79 ntBASIC-2.57□□□□□ -2.82
Trem3Q9JKE1 Snord72-201ENSMUST00000104549 81 ntBASIC-2.58□□□□□ -2.82
Trem3Q9JKE1 AC140930.2-201ENSMUST00000221803 109 ntBASIC-2.58□□□□□ -2.82
Trem3Q9JKE1 Gm23461-201ENSMUST00000083265 107 ntBASIC-2.59□□□□□ -2.82
Trem3Q9JKE1 Mir494-201ENSMUST00000093632 85 ntBASIC-2.59□□□□□ -2.82
Trem3Q9JKE1 Gm25599-201ENSMUST00000157816 103 ntBASIC-2.6□□□□□ -2.83
Trem3Q9JKE1 Gm26109-201ENSMUST00000083970 70 ntBASIC-2.6□□□□□ -2.83
Trem3Q9JKE1 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Gm25440-201ENSMUST00000158279 154 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Gm23209-201ENSMUST00000158667 110 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 AC165138.1-201ENSMUST00000226984 270 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Gm24201-201ENSMUST00000082946 125 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Gm23240-201ENSMUST00000083009 121 ntBASIC-2.61□□□□□ -2.83
Trem3Q9JKE1 Mir741-201ENSMUST00000103931 71 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 76,532 protein–RNA pairs in 194.7 ms