Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,78□□□□□ -2,13
Ube3bQ9ES34 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,77□□□□□ -2,13
Ube3bQ9ES34 Gm22165-201ENSMUST00000158414 103 ntBASIC1,77□□□□□ -2,13
Ube3bQ9ES34 Gm38274-201ENSMUST00000195689 148 ntBASIC1,77□□□□□ -2,13
Ube3bQ9ES34 Gm25222-201ENSMUST00000158199 126 ntBASIC1,76□□□□□ -2,13
Ube3bQ9ES34 Gm27420-201ENSMUST00000183823 79 ntBASIC1,76□□□□□ -2,13
Ube3bQ9ES34 Gm28794-201ENSMUST00000185276 136 ntBASIC1,76□□□□□ -2,13
Ube3bQ9ES34 Gm38323-201ENSMUST00000192450 210 ntBASIC1,76□□□□□ -2,13
Ube3bQ9ES34 Gm26052-201ENSMUST00000104646 84 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm22720-201ENSMUST00000122710 87 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm22520-201ENSMUST00000158269 129 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm24710-201ENSMUST00000175235 101 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm24135-201ENSMUST00000179085 101 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm27493-201ENSMUST00000184128 78 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Gm26224-201ENSMUST00000082506 80 ntBASIC1,74□□□□□ -2,13
Ube3bQ9ES34 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,73□□□□□ -2,13
Ube3bQ9ES34 Gm23955-201ENSMUST00000157214 100 ntBASIC1,73□□□□□ -2,13
Ube3bQ9ES34 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,73□□□□□ -2,13
Ube3bQ9ES34 Gm45125-201ENSMUST00000206908 151 ntBASIC1,73□□□□□ -2,13
Ube3bQ9ES34 Gm45754-201ENSMUST00000212380 279 ntBASIC1,73□□□□□ -2,13
Ube3bQ9ES34 Gm23122-201ENSMUST00000157645 103 ntBASIC1,72□□□□□ -2,13
Ube3bQ9ES34 Gm23036-201ENSMUST00000157885 99 ntBASIC1,72□□□□□ -2,13
Ube3bQ9ES34 Gm23180-201ENSMUST00000158686 125 ntBASIC1,72□□□□□ -2,13
Ube3bQ9ES34 Gm25936-201ENSMUST00000179952 114 ntBASIC1,72□□□□□ -2,13
Ube3bQ9ES34 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1,72□□□□□ -2,13
Ube3bQ9ES34 Gm25326-201ENSMUST00000101903 107 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Mir717-201ENSMUST00000102259 109 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Gm23989-201ENSMUST00000117030 66 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Gm23221-201ENSMUST00000158118 93 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Gm22746-201ENSMUST00000082494 107 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Gm24165-201ENSMUST00000082718 128 ntBASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,71□□□□□ -2,14
Ube3bQ9ES34 Mir873a-201ENSMUST00000104863 77 ntBASIC1,7□□□□□ -2,14
Ube3bQ9ES34 Gm26306-201ENSMUST00000157773 119 ntBASIC1,7□□□□□ -2,14
Ube3bQ9ES34 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,7□□□□□ -2,14
Ube3bQ9ES34 Gm22603-201ENSMUST00000157603 96 ntBASIC1,68□□□□□ -2,14
Ube3bQ9ES34 Gm27980-201ENSMUST00000184094 169 ntBASIC1,68□□□□□ -2,14
Ube3bQ9ES34 Gm44962-201ENSMUST00000206460 279 ntBASIC1,68□□□□□ -2,14
Ube3bQ9ES34 Gm22551-201ENSMUST00000157795 103 ntBASIC1,67□□□□□ -2,14
Ube3bQ9ES34 Gm25715-201ENSMUST00000158627 125 ntBASIC1,67□□□□□ -2,14
Ube3bQ9ES34 Gm24222-201ENSMUST00000158834 93 ntBASIC1,67□□□□□ -2,14
Ube3bQ9ES34 Gm22298-201ENSMUST00000082662 133 ntBASIC1,67□□□□□ -2,14
Ube3bQ9ES34 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,67□□□□□ -2,14
Ube3bQ9ES34 Gm26338-201ENSMUST00000102372 110 ntBASIC1,65□□□□□ -2,15
Ube3bQ9ES34 Gm23573-201ENSMUST00000104408 107 ntBASIC1,65□□□□□ -2,15
Ube3bQ9ES34 Gm25541-201ENSMUST00000116888 126 ntBASIC1,65□□□□□ -2,15
Ube3bQ9ES34 Mir3079-201ENSMUST00000175428 90 ntBASIC1,65□□□□□ -2,15
Ube3bQ9ES34 Snord57-201ENSMUST00000083338 72 ntBASIC1,65□□□□□ -2,15
Ube3bQ9ES34 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,64□□□□□ -2,15
Ube3bQ9ES34 Gm25993-201ENSMUST00000175391 80 ntBASIC1,64□□□□□ -2,15
Ube3bQ9ES34 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,64□□□□□ -2,15
Ube3bQ9ES34 Gm6607-201ENSMUST00000215035 328 ntBASIC1,64□□□□□ -2,15
Ube3bQ9ES34 AC129019.2-201ENSMUST00000222063 202 ntBASIC1,64□□□□□ -2,15
Ube3bQ9ES34 Gm24271-201ENSMUST00000102327 111 ntBASIC1,63□□□□□ -2,15
Ube3bQ9ES34 Gm23853-201ENSMUST00000158375 104 ntBASIC1,63□□□□□ -2,15
Ube3bQ9ES34 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,63□□□□□ -2,15
Ube3bQ9ES34 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1,62□□□□□ -2,15
Ube3bQ9ES34 Gm24262-201ENSMUST00000157431 144 ntBASIC1,62□□□□□ -2,15
Ube3bQ9ES34 Gm25307-201ENSMUST00000158885 106 ntBASIC1,62□□□□□ -2,15
Ube3bQ9ES34 Gm23416-201ENSMUST00000175520 95 ntBASIC1,62□□□□□ -2,15
Ube3bQ9ES34 Gm44211-201ENSMUST00000204867 145 ntBASIC1,62□□□□□ -2,15
Ube3bQ9ES34 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,61□□□□□ -2,15
Ube3bQ9ES34 Gm24808-201ENSMUST00000157993 118 ntBASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Traj60-201ENSMUST00000167781 54 ntBASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Gm23967-201ENSMUST00000175062 78 ntBASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Gm27263-201ENSMUST00000184760 76 ntBASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Gm22127-201ENSMUST00000083239 106 ntBASIC1,6□□□□□ -2,15
Ube3bQ9ES34 Mir653-201ENSMUST00000102402 85 ntBASIC1,59□□□□□ -2,15
Ube3bQ9ES34 Gm24895-201ENSMUST00000122742 74 ntBASIC1,59□□□□□ -2,15
Ube3bQ9ES34 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Gm24796-201ENSMUST00000104007 107 ntBASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Gm24942-201ENSMUST00000158328 114 ntBASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Gm24321-201ENSMUST00000175348 80 ntBASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Gm25296-201ENSMUST00000082566 67 ntBASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Gm25138-201ENSMUST00000083248 136 ntBASIC1,57□□□□□ -2,16
Ube3bQ9ES34 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1,56□□□□□ -2,16
Ube3bQ9ES34 Gm23017-201ENSMUST00000177583 72 ntBASIC1,56□□□□□ -2,16
Ube3bQ9ES34 Gm23267-201ENSMUST00000178490 132 ntBASIC1,56□□□□□ -2,16
Ube3bQ9ES34 Gm16399-201ENSMUST00000181423 219 ntBASIC1,56□□□□□ -2,16
Ube3bQ9ES34 Mir7010-201ENSMUST00000183464 63 ntBASIC1,55□□□□□ -2,16
Ube3bQ9ES34 Mir7063-201ENSMUST00000184158 91 ntBASIC1,55□□□□□ -2,16
Ube3bQ9ES34 Gm22357-201ENSMUST00000082882 83 ntBASIC1,55□□□□□ -2,16
Ube3bQ9ES34 Gm25894-201ENSMUST00000083458 75 ntBASIC1,55□□□□□ -2,16
Ube3bQ9ES34 Gm22233-201ENSMUST00000157464 114 ntBASIC1,54□□□□□ -2,16
Ube3bQ9ES34 Gm25868-201ENSMUST00000158253 114 ntBASIC1,54□□□□□ -2,16
Ube3bQ9ES34 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,54□□□□□ -2,16
Ube3bQ9ES34 Gm27326-201ENSMUST00000183504 95 ntBASIC1,54□□□□□ -2,16
Ube3bQ9ES34 Mir7665-201ENSMUST00000184907 63 ntBASIC1,53□□□□□ -2,16
Ube3bQ9ES34 Gm22542-201ENSMUST00000158166 95 ntBASIC1,52□□□□□ -2,17
Ube3bQ9ES34 Mir211-201ENSMUST00000083651 106 ntBASIC1,52□□□□□ -2,17
Ube3bQ9ES34 Mir23a-201ENSMUST00000083677 75 ntBASIC1,52□□□□□ -2,17
Ube3bQ9ES34 Gm25820-201ENSMUST00000198589 127 ntBASIC1,51□□□□□ -2,17
Ube3bQ9ES34 Gm44327-201ENSMUST00000200068 117 ntBASIC1,51□□□□□ -2,17
Ube3bQ9ES34 Gm26379-202ENSMUST00000200225 132 ntBASIC1,51□□□□□ -2,17
Ube3bQ9ES34 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,51□□□□□ -2,17
Ube3bQ9ES34 Mir343-201ENSMUST00000102360 75 ntBASIC1,5□□□□□ -2,17
Ube3bQ9ES34 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,5□□□□□ -2,17
Ube3bQ9ES34 Gm27587-201ENSMUST00000185116 163 ntBASIC1,5□□□□□ -2,17
Ube3bQ9ES34 AC125190.3-201ENSMUST00000223224 121 ntBASIC1,5□□□□□ -2,17
Retrieved 100 of 76,532 protein–RNA pairs in 10,4 ms