Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.78□□□□□ -2.53
Scn4aQ9ER60 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.78□□□□□ -2.53
Scn4aQ9ER60 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.78□□□□□ -2.53
Scn4aQ9ER60 Gm25653-201ENSMUST00000158473 138 ntBASIC-0.78□□□□□ -2.53
Scn4aQ9ER60 Gm25978-201ENSMUST00000158698 90 ntBASIC-0.79□□□□□ -2.54
Scn4aQ9ER60 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm26291-201ENSMUST00000158889 137 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm45429-201ENSMUST00000209527 172 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.8□□□□□ -2.54
Scn4aQ9ER60 Gm22911-201ENSMUST00000177920 107 ntBASIC-0.81□□□□□ -2.54
Scn4aQ9ER60 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.81□□□□□ -2.54
Scn4aQ9ER60 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.81□□□□□ -2.54
Scn4aQ9ER60 Gm25071-201ENSMUST00000175232 70 ntBASIC-0.82□□□□□ -2.54
Scn4aQ9ER60 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.82□□□□□ -2.54
Scn4aQ9ER60 Gm24801-201ENSMUST00000178503 105 ntBASIC-0.82□□□□□ -2.54
Scn4aQ9ER60 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.83□□□□□ -2.54
Scn4aQ9ER60 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.83□□□□□ -2.54
Scn4aQ9ER60 AC165138.1-201ENSMUST00000226984 270 ntBASIC-0.83□□□□□ -2.54
Scn4aQ9ER60 Gm22055-201ENSMUST00000083388 107 ntBASIC-0.83□□□□□ -2.54
Scn4aQ9ER60 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-0.84□□□□□ -2.54
Scn4aQ9ER60 Gm22775-201ENSMUST00000177630 120 ntBASIC-0.85□□□□□ -2.54
Scn4aQ9ER60 Gm23569-201ENSMUST00000180120 120 ntBASIC-0.85□□□□□ -2.54
Scn4aQ9ER60 Mir6481-201ENSMUST00000184617 110 ntBASIC-0.85□□□□□ -2.54
Scn4aQ9ER60 Gm25753-201ENSMUST00000116792 121 ntBASIC-0.85□□□□□ -2.55
Scn4aQ9ER60 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.85□□□□□ -2.55
Scn4aQ9ER60 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Gm25316-201ENSMUST00000116826 118 ntBASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Mir467g-201ENSMUST00000116906 120 ntBASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Gm23988-201ENSMUST00000117034 122 ntBASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.86□□□□□ -2.55
Scn4aQ9ER60 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Gm26337-201ENSMUST00000178000 79 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Mir7116-201ENSMUST00000195956 70 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Mir369-201ENSMUST00000083627 79 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Gm26018-201ENSMUST00000104406 128 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.87□□□□□ -2.55
Scn4aQ9ER60 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.88□□□□□ -2.55
Scn4aQ9ER60 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.88□□□□□ -2.55
Scn4aQ9ER60 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.88□□□□□ -2.55
Scn4aQ9ER60 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.89□□□□□ -2.55
Scn4aQ9ER60 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.89□□□□□ -2.55
Scn4aQ9ER60 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.89□□□□□ -2.55
Scn4aQ9ER60 Snord78-201ENSMUST00000104032 66 ntBASIC-0.9□□□□□ -2.55
Scn4aQ9ER60 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.9□□□□□ -2.55
Scn4aQ9ER60 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.9□□□□□ -2.55
Scn4aQ9ER60 Gm24918-201ENSMUST00000083022 130 ntBASIC-0.91□□□□□ -2.55
Scn4aQ9ER60 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.92□□□□□ -2.56
Scn4aQ9ER60 Gm25678-201ENSMUST00000174984 73 ntBASIC-0.92□□□□□ -2.56
Scn4aQ9ER60 Gm45655-201ENSMUST00000211625 160 ntBASIC-0.93□□□□□ -2.56
Scn4aQ9ER60 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.93□□□□□ -2.56
Scn4aQ9ER60 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.94□□□□□ -2.56
Scn4aQ9ER60 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.94□□□□□ -2.56
Scn4aQ9ER60 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
Scn4aQ9ER60 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.95□□□□□ -2.56
Scn4aQ9ER60 Gm23922-201ENSMUST00000178792 79 ntBASIC-0.95□□□□□ -2.56
Scn4aQ9ER60 Gm24657-201ENSMUST00000180085 79 ntBASIC-0.95□□□□□ -2.56
Scn4aQ9ER60 Gm22996-201ENSMUST00000180236 79 ntBASIC-0.95□□□□□ -2.56
Scn4aQ9ER60 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.95□□□□□ -2.56
Scn4aQ9ER60 Gm22140-201ENSMUST00000158745 120 ntBASIC-0.96□□□□□ -2.56
Scn4aQ9ER60 Gm22297-201ENSMUST00000083312 106 ntBASIC-0.96□□□□□ -2.56
Scn4aQ9ER60 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.96□□□□□ -2.56
Scn4aQ9ER60 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.97□□□□□ -2.56
Scn4aQ9ER60 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.98□□□□□ -2.57
Scn4aQ9ER60 Gm23651-201ENSMUST00000116755 120 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Mir677-202ENSMUST00000197076 78 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.99□□□□□ -2.57
Scn4aQ9ER60 Gm24377-201ENSMUST00000104398 131 ntBASIC-1□□□□□ -2.57
Scn4aQ9ER60 Gm44859-201ENSMUST00000207831 94 ntBASIC-1□□□□□ -2.57
Scn4aQ9ER60 Gm24001-201ENSMUST00000158463 85 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm42844-201ENSMUST00000200355 112 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm23507-201ENSMUST00000083078 107 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 AC164561.1-201ENSMUST00000220414 115 ntBASIC-1.01□□□□□ -2.57
Scn4aQ9ER60 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.02□□□□□ -2.57
Scn4aQ9ER60 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.02□□□□□ -2.57
Scn4aQ9ER60 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.02□□□□□ -2.57
Scn4aQ9ER60 Gm26412-201ENSMUST00000157666 55 ntBASIC-1.03□□□□□ -2.57
Scn4aQ9ER60 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.03□□□□□ -2.57
Scn4aQ9ER60 Gm24449-201ENSMUST00000083985 106 ntBASIC-1.04□□□□□ -2.58
Scn4aQ9ER60 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.05□□□□□ -2.58
Scn4aQ9ER60 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.05□□□□□ -2.58
Scn4aQ9ER60 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.05□□□□□ -2.58
Scn4aQ9ER60 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms