Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22055-201ENSMUST00000083388 107 ntBASIC-0.98□□□□□ -2.57
Ccdc3Q9D6Y1 Gm22558-201ENSMUST00000157326 95 ntBASIC-1□□□□□ -2.57
Ccdc3Q9D6Y1 Gm24750-201ENSMUST00000157843 104 ntBASIC-1□□□□□ -2.57
Ccdc3Q9D6Y1 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.01□□□□□ -2.57
Ccdc3Q9D6Y1 Mir1898-201ENSMUST00000122643 83 ntBASIC-1.01□□□□□ -2.57
Ccdc3Q9D6Y1 Gm22973-201ENSMUST00000083298 191 ntBASIC-1.01□□□□□ -2.57
Ccdc3Q9D6Y1 Gm25410-201ENSMUST00000083758 137 ntBASIC-1.01□□□□□ -2.57
Ccdc3Q9D6Y1 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.02□□□□□ -2.57
Ccdc3Q9D6Y1 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.03□□□□□ -2.57
Ccdc3Q9D6Y1 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.03□□□□□ -2.57
Ccdc3Q9D6Y1 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.03□□□□□ -2.57
Ccdc3Q9D6Y1 Gm22459-201ENSMUST00000082577 108 ntBASIC-1.03□□□□□ -2.57
Ccdc3Q9D6Y1 Mir369-201ENSMUST00000083627 79 ntBASIC-1.03□□□□□ -2.57
Ccdc3Q9D6Y1 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24263-201ENSMUST00000104059 107 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25316-201ENSMUST00000116826 118 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25425-201ENSMUST00000157611 96 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm26225-201ENSMUST00000082508 135 ntBASIC-1.04□□□□□ -2.58
Ccdc3Q9D6Y1 Gm23017-201ENSMUST00000177583 72 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Gm26092-201ENSMUST00000179798 97 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Gm38298-201ENSMUST00000193578 118 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Gm45125-201ENSMUST00000206908 151 ntBASIC-1.05□□□□□ -2.58
Ccdc3Q9D6Y1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24835-201ENSMUST00000116777 111 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25315-201ENSMUST00000116823 121 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24384-201ENSMUST00000122693 75 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25870-201ENSMUST00000179845 79 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm45655-201ENSMUST00000211625 160 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.06□□□□□ -2.58
Ccdc3Q9D6Y1 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-1.07□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25010-201ENSMUST00000158403 65 ntBASIC-1.07□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25978-201ENSMUST00000158698 90 ntBASIC-1.07□□□□□ -2.58
Ccdc3Q9D6Y1 Mir717-201ENSMUST00000102259 109 ntBASIC-1.08□□□□□ -2.58
Ccdc3Q9D6Y1 Gm22140-201ENSMUST00000158745 120 ntBASIC-1.08□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.08□□□□□ -2.58
Ccdc3Q9D6Y1 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.08□□□□□ -2.58
Ccdc3Q9D6Y1 Gm44470-201ENSMUST00000203913 142 ntBASIC-1.08□□□□□ -2.58
Ccdc3Q9D6Y1 Gm25991-201ENSMUST00000102439 99 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 AC161426.1-201ENSMUST00000214137 286 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 AC140930.2-201ENSMUST00000221803 109 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 Gm26109-201ENSMUST00000083970 70 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.09□□□□□ -2.58
Ccdc3Q9D6Y1 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
Ccdc3Q9D6Y1 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.11□□□□□ -2.59
Ccdc3Q9D6Y1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-1.11□□□□□ -2.59
Ccdc3Q9D6Y1 AC165138.1-201ENSMUST00000226984 270 ntBASIC-1.11□□□□□ -2.59
Ccdc3Q9D6Y1 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.12□□□□□ -2.59
Ccdc3Q9D6Y1 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.12□□□□□ -2.59
Ccdc3Q9D6Y1 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.12□□□□□ -2.59
Ccdc3Q9D6Y1 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.13□□□□□ -2.59
Ccdc3Q9D6Y1 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.13□□□□□ -2.59
Ccdc3Q9D6Y1 Mir136-201ENSMUST00000199494 62 ntBASIC-1.13□□□□□ -2.59
Ccdc3Q9D6Y1 Gm24134-201ENSMUST00000083361 71 ntBASIC-1.13□□□□□ -2.59
Ccdc3Q9D6Y1 Gm22672-201ENSMUST00000104414 134 ntBASIC-1.14□□□□□ -2.59
Ccdc3Q9D6Y1 Gm24070-201ENSMUST00000104519 130 ntBASIC-1.14□□□□□ -2.59
Ccdc3Q9D6Y1 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.14□□□□□ -2.59
Ccdc3Q9D6Y1 Gm26337-201ENSMUST00000178000 79 ntBASIC-1.14□□□□□ -2.59
Ccdc3Q9D6Y1 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.14□□□□□ -2.59
Ccdc3Q9D6Y1 Gm23922-201ENSMUST00000178792 79 ntBASIC-1.15□□□□□ -2.59
Ccdc3Q9D6Y1 Gm24657-201ENSMUST00000180085 79 ntBASIC-1.15□□□□□ -2.59
Ccdc3Q9D6Y1 Gm22996-201ENSMUST00000180236 79 ntBASIC-1.15□□□□□ -2.59
Ccdc3Q9D6Y1 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.15□□□□□ -2.59
Ccdc3Q9D6Y1 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.15□□□□□ -2.59
Ccdc3Q9D6Y1 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.16□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23852-201ENSMUST00000158376 77 ntBASIC-1.16□□□□□ -2.6
Ccdc3Q9D6Y1 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.16□□□□□ -2.6
Ccdc3Q9D6Y1 Mir7-1-201ENSMUST00000083500 108 ntBASIC-1.16□□□□□ -2.6
Ccdc3Q9D6Y1 mt-Tt-201ENSMUST00000082422 67 ntBASIC-1.17□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 Gm25440-201ENSMUST00000158279 154 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 AC164561.1-201ENSMUST00000220414 115 ntBASIC-1.18□□□□□ -2.6
Ccdc3Q9D6Y1 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.19□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.19□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.19□□□□□ -2.6
Ccdc3Q9D6Y1 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.19□□□□□ -2.6
Ccdc3Q9D6Y1 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm27928-201ENSMUST00000183747 256 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.2□□□□□ -2.6
Ccdc3Q9D6Y1 Mir741-201ENSMUST00000103931 71 ntBASIC-1.21□□□□□ -2.6
Ccdc3Q9D6Y1 Gm25071-201ENSMUST00000175232 70 ntBASIC-1.21□□□□□ -2.6
Ccdc3Q9D6Y1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.21□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 222.1 ms