Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm25656-201ENSMUST00000158466 66 ntBASIC1,35□□□□□ -2,19
Trim13Q9CYB0 Gm25309-201ENSMUST00000116728 126 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Gm25222-201ENSMUST00000158199 126 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Gm27420-201ENSMUST00000183823 79 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Mir8090-201ENSMUST00000185078 136 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Gm22746-201ENSMUST00000082494 107 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Mir30a-201ENSMUST00000083471 71 ntBASIC1,34□□□□□ -2,19
Trim13Q9CYB0 Gm23130-201ENSMUST00000104252 74 ntBASIC1,33□□□□□ -2,2
Trim13Q9CYB0 Gm24288-201ENSMUST00000157630 144 ntBASIC1,33□□□□□ -2,2
Trim13Q9CYB0 Gm24233-201ENSMUST00000104317 122 ntBASIC1,32□□□□□ -2,2
Trim13Q9CYB0 Gm25495-201ENSMUST00000104431 131 ntBASIC1,32□□□□□ -2,2
Trim13Q9CYB0 Gm23955-201ENSMUST00000157214 100 ntBASIC1,32□□□□□ -2,2
Trim13Q9CYB0 Gm25055-201ENSMUST00000157369 76 ntBASIC1,32□□□□□ -2,2
Trim13Q9CYB0 Gm22551-201ENSMUST00000157795 103 ntBASIC1,32□□□□□ -2,2
Trim13Q9CYB0 Gm23036-201ENSMUST00000157885 99 ntBASIC1,31□□□□□ -2,2
Trim13Q9CYB0 Traj60-201ENSMUST00000167781 54 ntBASIC1,31□□□□□ -2,2
Trim13Q9CYB0 Gm27711-201ENSMUST00000183802 118 ntBASIC1,31□□□□□ -2,2
Trim13Q9CYB0 Snord57-201ENSMUST00000083338 72 ntBASIC1,31□□□□□ -2,2
Trim13Q9CYB0 Mir500-201ENSMUST00000093600 92 ntBASIC1,31□□□□□ -2,2
Trim13Q9CYB0 Gm25968-201ENSMUST00000157167 100 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm22165-201ENSMUST00000158414 103 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm24500-201ENSMUST00000158447 124 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm38274-201ENSMUST00000195689 148 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm44483-201ENSMUST00000197203 97 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm26224-201ENSMUST00000082506 80 ntBASIC1,3□□□□□ -2,2
Trim13Q9CYB0 Gm23558-201ENSMUST00000157823 80 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Gm23180-201ENSMUST00000158686 125 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Gm24638-201ENSMUST00000179807 132 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Gm16399-201ENSMUST00000181423 219 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Gm38323-201ENSMUST00000192450 210 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Mir320-201ENSMUST00000083594 82 ntBASIC1,29□□□□□ -2,2
Trim13Q9CYB0 Mir301b-201ENSMUST00000102333 97 ntBASIC1,28□□□□□ -2,2
Trim13Q9CYB0 Gm6272-201ENSMUST00000121256 171 ntBASIC1,28□□□□□ -2,2
Trim13Q9CYB0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm25326-201ENSMUST00000101903 107 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm26052-201ENSMUST00000104646 84 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm24808-201ENSMUST00000157993 118 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm24076-201ENSMUST00000158179 94 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm23289-201ENSMUST00000175615 108 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm44211-201ENSMUST00000204867 145 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Gm22127-201ENSMUST00000083239 106 ntBASIC1,27□□□□□ -2,21
Trim13Q9CYB0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,26□□□□□ -2,21
Trim13Q9CYB0 Mir717-201ENSMUST00000102259 109 ntBASIC1,26□□□□□ -2,21
Trim13Q9CYB0 Gm25832-201ENSMUST00000104140 130 ntBASIC1,26□□□□□ -2,21
Trim13Q9CYB0 Gm45125-201ENSMUST00000206908 151 ntBASIC1,26□□□□□ -2,21
Trim13Q9CYB0 Gm6607-201ENSMUST00000215035 328 ntBASIC1,26□□□□□ -2,21
Trim13Q9CYB0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Gm24271-201ENSMUST00000102327 111 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Gm23573-201ENSMUST00000104408 107 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Gm23989-201ENSMUST00000117030 66 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Gm22720-201ENSMUST00000122710 87 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Gm22520-201ENSMUST00000158269 129 ntBASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,25□□□□□ -2,21
Trim13Q9CYB0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,24□□□□□ -2,21
Trim13Q9CYB0 Gm27898-201ENSMUST00000183987 80 ntBASIC1,24□□□□□ -2,21
Trim13Q9CYB0 Gm27980-201ENSMUST00000184094 169 ntBASIC1,24□□□□□ -2,21
Trim13Q9CYB0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,23□□□□□ -2,21
Trim13Q9CYB0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,23□□□□□ -2,21
Trim13Q9CYB0 Gm24865-201ENSMUST00000103246 96 ntBASIC1,22□□□□□ -2,21
Trim13Q9CYB0 Gm25128-201ENSMUST00000083339 76 ntBASIC1,22□□□□□ -2,21
Trim13Q9CYB0 Gm23245-201ENSMUST00000083370 135 ntBASIC1,22□□□□□ -2,21
Trim13Q9CYB0 Gm24902-201ENSMUST00000158126 123 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Gm25715-201ENSMUST00000158627 125 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Gm25307-201ENSMUST00000158885 106 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Gm25831-201ENSMUST00000158924 163 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Gm27493-201ENSMUST00000184128 78 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Mir7009-201ENSMUST00000184519 64 ntBASIC1,21□□□□□ -2,22
Trim13Q9CYB0 Gm22233-201ENSMUST00000157464 114 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm25868-201ENSMUST00000158253 114 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm23017-201ENSMUST00000177583 72 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm27263-201ENSMUST00000184760 76 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm28794-201ENSMUST00000185276 136 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm22298-201ENSMUST00000082662 133 ntBASIC1,2□□□□□ -2,22
Trim13Q9CYB0 Gm23853-201ENSMUST00000158375 104 ntBASIC1,19□□□□□ -2,22
Trim13Q9CYB0 Gm25993-201ENSMUST00000175391 80 ntBASIC1,19□□□□□ -2,22
Trim13Q9CYB0 Mir3087-201ENSMUST00000199405 56 ntBASIC1,19□□□□□ -2,22
Trim13Q9CYB0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,18□□□□□ -2,22
Trim13Q9CYB0 Gm26379-202ENSMUST00000200225 132 ntBASIC1,18□□□□□ -2,22
Trim13Q9CYB0 AC129019.2-201ENSMUST00000222063 202 ntBASIC1,18□□□□□ -2,22
Trim13Q9CYB0 Gm22357-201ENSMUST00000082882 83 ntBASIC1,18□□□□□ -2,22
Trim13Q9CYB0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,18□□□□□ -2,22
Trim13Q9CYB0 Gm24796-201ENSMUST00000104007 107 ntBASIC1,17□□□□□ -2,22
Trim13Q9CYB0 Gm23122-201ENSMUST00000157645 103 ntBASIC1,17□□□□□ -2,22
Trim13Q9CYB0 AC168062.3-201ENSMUST00000227025 165 ntBASIC1,17□□□□□ -2,22
Trim13Q9CYB0 Gm26338-201ENSMUST00000102372 110 ntBASIC1,16□□□□□ -2,22
Trim13Q9CYB0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,16□□□□□ -2,22
Trim13Q9CYB0 Mir3079-201ENSMUST00000175428 90 ntBASIC1,16□□□□□ -2,22
Trim13Q9CYB0 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1,16□□□□□ -2,22
Trim13Q9CYB0 Gm24297-201ENSMUST00000158300 68 ntBASIC1,15□□□□□ -2,23
Trim13Q9CYB0 Gm24942-201ENSMUST00000158328 114 ntBASIC1,14□□□□□ -2,23
Trim13Q9CYB0 Gm23416-201ENSMUST00000175520 95 ntBASIC1,14□□□□□ -2,23
Trim13Q9CYB0 Mir7010-201ENSMUST00000183464 63 ntBASIC1,14□□□□□ -2,23
Trim13Q9CYB0 Gm22302-201ENSMUST00000082657 106 ntBASIC1,14□□□□□ -2,23
Trim13Q9CYB0 Mir23a-201ENSMUST00000083677 75 ntBASIC1,14□□□□□ -2,23
Trim13Q9CYB0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1,13□□□□□ -2,23
Trim13Q9CYB0 Gm24555-201ENSMUST00000104548 124 ntBASIC1,13□□□□□ -2,23
Trim13Q9CYB0 Gm22542-201ENSMUST00000158166 95 ntBASIC1,13□□□□□ -2,23
Trim13Q9CYB0 Gm22074-201ENSMUST00000158595 113 ntBASIC1,13□□□□□ -2,23
Trim13Q9CYB0 Gm23347-201ENSMUST00000083823 82 ntBASIC1,13□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 100,5 ms