Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm22750-201ENSMUST00000102076 103 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Mir301b-201ENSMUST00000102333 97 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm24865-201ENSMUST00000103246 96 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm23989-201ENSMUST00000117030 66 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm24288-201ENSMUST00000157630 144 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm24797-201ENSMUST00000178103 107 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm22474-201ENSMUST00000179407 107 ntBASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,44□□□□□ -2,18
Trim11Q99PQ2 Gm25055-201ENSMUST00000157369 76 ntBASIC1,43□□□□□ -2,18
Trim11Q99PQ2 Gm23670-201ENSMUST00000157469 119 ntBASIC1,43□□□□□ -2,18
Trim11Q99PQ2 Gm24500-201ENSMUST00000158447 124 ntBASIC1,43□□□□□ -2,18
Trim11Q99PQ2 Gm25832-201ENSMUST00000104140 130 ntBASIC1,42□□□□□ -2,18
Trim11Q99PQ2 Gm22595-201ENSMUST00000104250 130 ntBASIC1,41□□□□□ -2,18
Trim11Q99PQ2 Gm22520-201ENSMUST00000158269 129 ntBASIC1,41□□□□□ -2,18
Trim11Q99PQ2 Gm23853-201ENSMUST00000158375 104 ntBASIC1,41□□□□□ -2,18
Trim11Q99PQ2 Gm23036-201ENSMUST00000157885 99 ntBASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Gm22074-201ENSMUST00000158595 113 ntBASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Gm44408-201ENSMUST00000200205 66 ntBASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Mir211-201ENSMUST00000083651 106 ntBASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Gm24259-201ENSMUST00000083740 107 ntBASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,4□□□□□ -2,19
Trim11Q99PQ2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Gm22233-201ENSMUST00000157464 114 ntBASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Gm25868-201ENSMUST00000158253 114 ntBASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Mir3079-201ENSMUST00000175428 90 ntBASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Mir7231-201ENSMUST00000196252 61 ntBASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Gm23245-201ENSMUST00000083370 135 ntBASIC1,39□□□□□ -2,19
Trim11Q99PQ2 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1,38□□□□□ -2,19
Trim11Q99PQ2 Gm25309-201ENSMUST00000116728 126 ntBASIC1,38□□□□□ -2,19
Trim11Q99PQ2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,38□□□□□ -2,19
Trim11Q99PQ2 Gm27980-201ENSMUST00000184094 169 ntBASIC1,38□□□□□ -2,19
Trim11Q99PQ2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1,37□□□□□ -2,19
Trim11Q99PQ2 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 Gm22965-201ENSMUST00000157958 101 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 Gm24076-201ENSMUST00000158179 94 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 Gm22980-201ENSMUST00000082608 70 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 Gm25802-201ENSMUST00000082639 77 ntBASIC1,37□□□□□ -2,19
Trim11Q99PQ2 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,36□□□□□ -2,19
Trim11Q99PQ2 Gm25715-201ENSMUST00000158627 125 ntBASIC1,36□□□□□ -2,19
Trim11Q99PQ2 Gm26007-201ENSMUST00000158798 120 ntBASIC1,36□□□□□ -2,19
Trim11Q99PQ2 Gm25128-201ENSMUST00000083339 76 ntBASIC1,36□□□□□ -2,19
Trim11Q99PQ2 Gm25087-201ENSMUST00000101992 78 ntBASIC1,35□□□□□ -2,19
Trim11Q99PQ2 Gm23416-201ENSMUST00000175520 95 ntBASIC1,35□□□□□ -2,19
Trim11Q99PQ2 Mir7063-201ENSMUST00000184158 91 ntBASIC1,35□□□□□ -2,19
Trim11Q99PQ2 Mir8090-201ENSMUST00000185078 136 ntBASIC1,35□□□□□ -2,19
Trim11Q99PQ2 Gm26467-201ENSMUST00000097257 78 ntBASIC1,35□□□□□ -2,19
Trim11Q99PQ2 Gm22485-201ENSMUST00000157990 109 ntBASIC1,34□□□□□ -2,19
Trim11Q99PQ2 Mir7010-201ENSMUST00000183464 63 ntBASIC1,34□□□□□ -2,19
Trim11Q99PQ2 Gm28794-201ENSMUST00000185276 136 ntBASIC1,34□□□□□ -2,19
Trim11Q99PQ2 Gm24723-201ENSMUST00000158233 132 ntBASIC1,33□□□□□ -2,2
Trim11Q99PQ2 Gm24942-201ENSMUST00000158328 114 ntBASIC1,33□□□□□ -2,2
Trim11Q99PQ2 Gm22016-201ENSMUST00000158793 114 ntBASIC1,33□□□□□ -2,2
Trim11Q99PQ2 Mir7091-201ENSMUST00000184075 79 ntBASIC1,33□□□□□ -2,2
Trim11Q99PQ2 Gm44211-201ENSMUST00000204867 145 ntBASIC1,32□□□□□ -2,2
Trim11Q99PQ2 Gm45125-201ENSMUST00000206908 151 ntBASIC1,32□□□□□ -2,2
Trim11Q99PQ2 Gm22165-201ENSMUST00000158414 103 ntBASIC1,31□□□□□ -2,2
Trim11Q99PQ2 Gm25307-201ENSMUST00000158885 106 ntBASIC1,31□□□□□ -2,2
Trim11Q99PQ2 Gm42533-201ENSMUST00000196247 157 ntBASIC1,31□□□□□ -2,2
Trim11Q99PQ2 Gm22720-201ENSMUST00000122710 87 ntBASIC1,3□□□□□ -2,2
Trim11Q99PQ2 Gm25993-201ENSMUST00000175391 80 ntBASIC1,3□□□□□ -2,2
Trim11Q99PQ2 Mir717-201ENSMUST00000102259 109 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Gm26338-201ENSMUST00000102372 110 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Gm26363-201ENSMUST00000158866 83 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Gm23289-201ENSMUST00000175615 108 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Gm24508-201ENSMUST00000180104 107 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Gm38274-201ENSMUST00000195689 148 ntBASIC1,29□□□□□ -2,2
Trim11Q99PQ2 Mir3569-201ENSMUST00000185080 58 ntBASIC1,28□□□□□ -2,2
Trim11Q99PQ2 AC168062.3-201ENSMUST00000227025 165 ntBASIC1,28□□□□□ -2,2
Trim11Q99PQ2 Gm25138-201ENSMUST00000083248 136 ntBASIC1,28□□□□□ -2,2
Trim11Q99PQ2 Snord57-201ENSMUST00000083338 72 ntBASIC1,28□□□□□ -2,2
Trim11Q99PQ2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1,28□□□□□ -2,21
Trim11Q99PQ2 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,27□□□□□ -2,21
Trim11Q99PQ2 Gm24321-201ENSMUST00000175348 80 ntBASIC1,27□□□□□ -2,21
Trim11Q99PQ2 AC129019.2-201ENSMUST00000222063 202 ntBASIC1,27□□□□□ -2,21
Trim11Q99PQ2 Gm26259-201ENSMUST00000104778 97 ntBASIC1,26□□□□□ -2,21
Trim11Q99PQ2 Gm22542-201ENSMUST00000158166 95 ntBASIC1,26□□□□□ -2,21
Trim11Q99PQ2 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,26□□□□□ -2,21
Trim11Q99PQ2 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,26□□□□□ -2,21
Trim11Q99PQ2 Gm22746-201ENSMUST00000082494 107 ntBASIC1,26□□□□□ -2,21
Trim11Q99PQ2 Gm23961-201ENSMUST00000104685 97 ntBASIC1,25□□□□□ -2,21
Trim11Q99PQ2 Gm24710-201ENSMUST00000175235 101 ntBASIC1,25□□□□□ -2,21
Trim11Q99PQ2 Gm24135-201ENSMUST00000179085 101 ntBASIC1,25□□□□□ -2,21
Trim11Q99PQ2 Gm27587-201ENSMUST00000185116 163 ntBASIC1,25□□□□□ -2,21
Trim11Q99PQ2 Mir1904-201ENSMUST00000122702 80 ntBASIC1,24□□□□□ -2,21
Trim11Q99PQ2 Gm24218-201ENSMUST00000180163 105 ntBASIC1,24□□□□□ -2,21
Trim11Q99PQ2 Mir6381-201ENSMUST00000183426 87 ntBASIC1,24□□□□□ -2,21
Trim11Q99PQ2 Gm25894-201ENSMUST00000083458 75 ntBASIC1,24□□□□□ -2,21
Trim11Q99PQ2 Gm23180-201ENSMUST00000158686 125 ntBASIC1,23□□□□□ -2,21
Trim11Q99PQ2 Mir15a-201ENSMUST00000175266 84 ntBASIC1,23□□□□□ -2,21
Trim11Q99PQ2 Gm27898-201ENSMUST00000183987 80 ntBASIC1,23□□□□□ -2,21
Trim11Q99PQ2 Gm27943-201ENSMUST00000184844 116 ntBASIC1,23□□□□□ -2,21
Trim11Q99PQ2 Gm25326-201ENSMUST00000101903 107 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm22780-201ENSMUST00000104084 132 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm24777-201ENSMUST00000157644 107 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm27974-201ENSMUST00000183415 105 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Mir7009-201ENSMUST00000184519 64 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm27263-201ENSMUST00000184760 76 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm44327-201ENSMUST00000200068 117 ntBASIC1,22□□□□□ -2,21
Trim11Q99PQ2 Gm26379-202ENSMUST00000200225 132 ntBASIC1,22□□□□□ -2,21
Retrieved 100 of 76,532 protein–RNA pairs in 95,5 ms