Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Mir15a-201ENSMUST00000175266 84 ntBASIC1.55□□□□□ -2.16
Usp3Q91W36 Gm29344-201ENSMUST00000068143 210 ntBASIC1.55□□□□□ -2.16
Usp3Q91W36 Gm24624-201ENSMUST00000082617 164 ntBASIC1.55□□□□□ -2.16
Usp3Q91W36 Gm25055-201ENSMUST00000157369 76 ntBASIC1.54□□□□□ -2.16
Usp3Q91W36 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Usp3Q91W36 Mir487b-201ENSMUST00000102265 82 ntBASIC1.53□□□□□ -2.16
Usp3Q91W36 Gm25831-201ENSMUST00000158924 163 ntBASIC1.53□□□□□ -2.16
Usp3Q91W36 Mir3087-201ENSMUST00000199405 56 ntBASIC1.53□□□□□ -2.16
Usp3Q91W36 Gm23558-201ENSMUST00000157823 80 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Gm24902-201ENSMUST00000158126 123 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Gm25715-201ENSMUST00000158627 125 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Gm26491-201ENSMUST00000179268 121 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Gm27943-201ENSMUST00000184844 116 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Gm25138-201ENSMUST00000083248 136 ntBASIC1.52□□□□□ -2.17
Usp3Q91W36 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.51□□□□□ -2.17
Usp3Q91W36 Gm23036-201ENSMUST00000157885 99 ntBASIC1.51□□□□□ -2.17
Usp3Q91W36 Gm24725-201ENSMUST00000158229 125 ntBASIC1.51□□□□□ -2.17
Usp3Q91W36 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.51□□□□□ -2.17
Usp3Q91W36 Mir3071-201ENSMUST00000093621 80 ntBASIC1.51□□□□□ -2.17
Usp3Q91W36 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Usp3Q91W36 Gm24288-201ENSMUST00000157630 144 ntBASIC1.5□□□□□ -2.17
Usp3Q91W36 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Usp3Q91W36 Gm27493-201ENSMUST00000184128 78 ntBASIC1.5□□□□□ -2.17
Usp3Q91W36 Mir6905-201ENSMUST00000184228 70 ntBASIC1.49□□□□□ -2.17
Usp3Q91W36 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.49□□□□□ -2.17
Usp3Q91W36 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Usp3Q91W36 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Usp3Q91W36 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.48□□□□□ -2.17
Usp3Q91W36 Gm23730-201ENSMUST00000083236 107 ntBASIC1.48□□□□□ -2.17
Usp3Q91W36 Gm25652-201ENSMUST00000083780 103 ntBASIC1.48□□□□□ -2.17
Usp3Q91W36 Gm24400-201ENSMUST00000157865 107 ntBASIC1.47□□□□□ -2.17
Usp3Q91W36 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.47□□□□□ -2.17
Usp3Q91W36 Gm23122-201ENSMUST00000157645 103 ntBASIC1.46□□□□□ -2.18
Usp3Q91W36 Gm25307-201ENSMUST00000158885 106 ntBASIC1.46□□□□□ -2.18
Usp3Q91W36 Gm24321-201ENSMUST00000175348 80 ntBASIC1.46□□□□□ -2.18
Usp3Q91W36 Mir33-201ENSMUST00000083531 69 ntBASIC1.46□□□□□ -2.18
Usp3Q91W36 Gm25010-201ENSMUST00000158403 65 ntBASIC1.45□□□□□ -2.18
Usp3Q91W36 Gm44962-201ENSMUST00000206460 279 ntBASIC1.45□□□□□ -2.18
Usp3Q91W36 Gm24612-201ENSMUST00000083267 107 ntBASIC1.44□□□□□ -2.18
Usp3Q91W36 Gm25495-201ENSMUST00000104431 131 ntBASIC1.43□□□□□ -2.18
Usp3Q91W36 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Usp3Q91W36 Gm22542-201ENSMUST00000158166 95 ntBASIC1.42□□□□□ -2.18
Usp3Q91W36 Gm27587-201ENSMUST00000185116 163 ntBASIC1.42□□□□□ -2.18
Usp3Q91W36 Mir448-201ENSMUST00000083516 112 ntBASIC1.42□□□□□ -2.18
Usp3Q91W36 Gm26338-201ENSMUST00000102372 110 ntBASIC1.41□□□□□ -2.18
Usp3Q91W36 Mir200a-201ENSMUST00000083466 90 ntBASIC1.41□□□□□ -2.18
Usp3Q91W36 Gm25993-201ENSMUST00000175391 80 ntBASIC1.4□□□□□ -2.19
Usp3Q91W36 Gm25894-201ENSMUST00000083458 75 ntBASIC1.4□□□□□ -2.19
Usp3Q91W36 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Usp3Q91W36 Gm24996-201ENSMUST00000158390 99 ntBASIC1.39□□□□□ -2.19
Usp3Q91W36 Gm22401-201ENSMUST00000174927 117 ntBASIC1.39□□□□□ -2.19
Usp3Q91W36 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.39□□□□□ -2.19
Usp3Q91W36 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.39□□□□□ -2.19
Usp3Q91W36 Gm23245-201ENSMUST00000083370 135 ntBASIC1.39□□□□□ -2.19
Usp3Q91W36 Gm25309-201ENSMUST00000116728 126 ntBASIC1.38□□□□□ -2.19
Usp3Q91W36 Gm44327-201ENSMUST00000200068 117 ntBASIC1.38□□□□□ -2.19
Usp3Q91W36 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Usp3Q91W36 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Usp3Q91W36 Gm22595-201ENSMUST00000104250 130 ntBASIC1.36□□□□□ -2.19
Usp3Q91W36 Gm22074-201ENSMUST00000158595 113 ntBASIC1.36□□□□□ -2.19
Usp3Q91W36 Gm25820-201ENSMUST00000198589 127 ntBASIC1.36□□□□□ -2.19
Usp3Q91W36 DQ267101-201ENSMUST00000082562 73 ntBASIC1.36□□□□□ -2.19
Usp3Q91W36 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Usp3Q91W36 Gm23630-201ENSMUST00000175292 104 ntBASIC1.35□□□□□ -2.19
Usp3Q91W36 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.35□□□□□ -2.19
Usp3Q91W36 Gm23020-201ENSMUST00000158766 253 ntBASIC1.34□□□□□ -2.19
Usp3Q91W36 Gm23967-201ENSMUST00000175062 78 ntBASIC1.34□□□□□ -2.19
Usp3Q91W36 Mir7063-201ENSMUST00000184158 91 ntBASIC1.33□□□□□ -2.2
Usp3Q91W36 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.33□□□□□ -2.2
Usp3Q91W36 Gm25802-201ENSMUST00000082639 77 ntBASIC1.33□□□□□ -2.2
Usp3Q91W36 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.33□□□□□ -2.2
Usp3Q91W36 Mir211-201ENSMUST00000083651 106 ntBASIC1.33□□□□□ -2.2
Usp3Q91W36 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Usp3Q91W36 Gm45125-201ENSMUST00000206908 151 ntBASIC1.32□□□□□ -2.2
Usp3Q91W36 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.32□□□□□ -2.2
Usp3Q91W36 Gm22303-201ENSMUST00000082686 122 ntBASIC1.32□□□□□ -2.2
Usp3Q91W36 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Usp3Q91W36 Gm22720-201ENSMUST00000122710 87 ntBASIC1.31□□□□□ -2.2
Usp3Q91W36 Gm44345-201ENSMUST00000199560 135 ntBASIC1.31□□□□□ -2.2
Usp3Q91W36 mt-Tw-201ENSMUST00000082397 67 ntBASIC1.31□□□□□ -2.2
Usp3Q91W36 Snord32a-201ENSMUST00000083285 83 ntBASIC1.31□□□□□ -2.2
Usp3Q91W36 Gm24797-201ENSMUST00000178103 107 ntBASIC1.3□□□□□ -2.2
Usp3Q91W36 Gm24920-201ENSMUST00000083018 85 ntBASIC1.3□□□□□ -2.2
Usp3Q91W36 Gm23267-201ENSMUST00000178490 132 ntBASIC1.29□□□□□ -2.2
Usp3Q91W36 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Usp3Q91W36 Mir7665-201ENSMUST00000184907 63 ntBASIC1.29□□□□□ -2.2
Usp3Q91W36 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Usp3Q91W36 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.28□□□□□ -2.2
Usp3Q91W36 Gm26375-201ENSMUST00000101829 106 ntBASIC1.28□□□□□ -2.2
Usp3Q91W36 Gm26007-201ENSMUST00000158798 120 ntBASIC1.28□□□□□ -2.2
Usp3Q91W36 Gm27326-201ENSMUST00000183504 95 ntBASIC1.28□□□□□ -2.2
Usp3Q91W36 Mir717-201ENSMUST00000102259 109 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Mir343-201ENSMUST00000102360 75 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Gm12432-201ENSMUST00000119540 186 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Gm22559-201ENSMUST00000157329 134 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Gm27974-201ENSMUST00000183415 105 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Mir7231-201ENSMUST00000196252 61 ntBASIC1.27□□□□□ -2.21
Usp3Q91W36 Gm24865-201ENSMUST00000103246 96 ntBASIC1.26□□□□□ -2.21
Usp3Q91W36 Gm22965-201ENSMUST00000157958 101 ntBASIC1.26□□□□□ -2.21
Usp3Q91W36 Gm22165-201ENSMUST00000158414 103 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 160.1 ms