Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm25622-201ENSMUST00000157217 104 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm22340-201ENSMUST00000157717 114 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm22605-201ENSMUST00000158289 108 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm23038-201ENSMUST00000083873 104 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm24445-201ENSMUST00000083981 107 ntBASIC0.54□□□□□ -2.32
Brf1Q8CFK2 Gm23672-201ENSMUST00000157471 107 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm25656-201ENSMUST00000158466 66 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm24772-201ENSMUST00000158507 110 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm24637-201ENSMUST00000158674 85 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm43038-201ENSMUST00000202359 88 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm25696-201ENSMUST00000082900 105 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Mir5117-201ENSMUST00000083226 84 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 Gm22354-201ENSMUST00000083919 70 ntBASIC0.53□□□□□ -2.32
Brf1Q8CFK2 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.51□□□□□ -2.33
Brf1Q8CFK2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.51□□□□□ -2.33
Brf1Q8CFK2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.51□□□□□ -2.33
Brf1Q8CFK2 Gm44932-201ENSMUST00000206799 121 ntBASIC0.51□□□□□ -2.33
Brf1Q8CFK2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.51□□□□□ -2.33
Brf1Q8CFK2 Gm25756-201ENSMUST00000103990 136 ntBASIC0.5□□□□□ -2.33
Brf1Q8CFK2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.5□□□□□ -2.33
Brf1Q8CFK2 Gm26438-201ENSMUST00000082593 107 ntBASIC0.5□□□□□ -2.33
Brf1Q8CFK2 Gm22950-201ENSMUST00000082776 107 ntBASIC0.5□□□□□ -2.33
Brf1Q8CFK2 Gm27975-201ENSMUST00000184400 101 ntBASIC0.49□□□□□ -2.33
Brf1Q8CFK2 CT571266.1-201ENSMUST00000222859 153 ntBASIC0.49□□□□□ -2.33
Brf1Q8CFK2 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.48□□□□□ -2.33
Brf1Q8CFK2 Gm25247-201ENSMUST00000175475 90 ntBASIC0.48□□□□□ -2.33
Brf1Q8CFK2 Gm25633-201ENSMUST00000178565 107 ntBASIC0.48□□□□□ -2.33
Brf1Q8CFK2 Gm25870-201ENSMUST00000179845 79 ntBASIC0.48□□□□□ -2.33
Brf1Q8CFK2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.48□□□□□ -2.33
Brf1Q8CFK2 Gm23652-201ENSMUST00000116752 107 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Mir669h-201ENSMUST00000116944 125 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Gm25055-201ENSMUST00000157369 76 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Gm22983-201ENSMUST00000158308 104 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Gm24884-201ENSMUST00000158784 119 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Gm22454-201ENSMUST00000082583 107 ntBASIC0.47□□□□□ -2.33
Brf1Q8CFK2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.45□□□□□ -2.34
Brf1Q8CFK2 Gm44803-201ENSMUST00000204384 156 ntBASIC0.45□□□□□ -2.34
Brf1Q8CFK2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.45□□□□□ -2.34
Brf1Q8CFK2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.45□□□□□ -2.34
Brf1Q8CFK2 Gm26007-201ENSMUST00000158798 120 ntBASIC0.44□□□□□ -2.34
Brf1Q8CFK2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.44□□□□□ -2.34
Brf1Q8CFK2 Gm42845-201ENSMUST00000197766 105 ntBASIC0.44□□□□□ -2.34
Brf1Q8CFK2 Gm25991-201ENSMUST00000102439 99 ntBASIC0.43□□□□□ -2.34
Brf1Q8CFK2 Gm24580-201ENSMUST00000103965 131 ntBASIC0.43□□□□□ -2.34
Brf1Q8CFK2 Gm26104-201ENSMUST00000157250 108 ntBASIC0.43□□□□□ -2.34
Brf1Q8CFK2 Gm42677-201ENSMUST00000196363 127 ntBASIC0.43□□□□□ -2.34
Brf1Q8CFK2 Gm25322-201ENSMUST00000122556 104 ntBASIC0.42□□□□□ -2.34
Brf1Q8CFK2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Brf1Q8CFK2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm14533-201ENSMUST00000117088 93 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm23468-201ENSMUST00000157125 108 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm22542-201ENSMUST00000158166 95 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm25307-201ENSMUST00000158885 106 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm25328-201ENSMUST00000175013 107 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Mir3065-201ENSMUST00000198674 87 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm26207-201ENSMUST00000082909 104 ntBASIC0.41□□□□□ -2.34
Brf1Q8CFK2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.4□□□□□ -2.35
Brf1Q8CFK2 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.4□□□□□ -2.35
Brf1Q8CFK2 Gm22805-201ENSMUST00000082739 107 ntBASIC0.4□□□□□ -2.35
Brf1Q8CFK2 Gm25375-201ENSMUST00000158157 135 ntBASIC0.39□□□□□ -2.35
Brf1Q8CFK2 Snord50a-201ENSMUST00000178154 72 ntBASIC0.39□□□□□ -2.35
Brf1Q8CFK2 Gm24463-201ENSMUST00000178417 72 ntBASIC0.39□□□□□ -2.35
Brf1Q8CFK2 Gm22981-201ENSMUST00000082611 75 ntBASIC0.39□□□□□ -2.35
Brf1Q8CFK2 Gm25993-201ENSMUST00000175391 80 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 Gm27607-201ENSMUST00000185162 122 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 Gm25798-201ENSMUST00000082641 107 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 Mir18-201ENSMUST00000083469 96 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 Gm24162-201ENSMUST00000093665 102 ntBASIC0.38□□□□□ -2.35
Brf1Q8CFK2 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Brf1Q8CFK2 Gm25112-201ENSMUST00000122680 104 ntBASIC0.37□□□□□ -2.35
Brf1Q8CFK2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.37□□□□□ -2.35
Brf1Q8CFK2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
Brf1Q8CFK2 Gm29432-201ENSMUST00000185397 139 ntBASIC0.37□□□□□ -2.35
Brf1Q8CFK2 Gm14947-201ENSMUST00000133704 303 ntBASIC0.36□□□□□ -2.35
Brf1Q8CFK2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.35□□□□□ -2.35
Brf1Q8CFK2 Gm23020-201ENSMUST00000158766 253 ntBASIC0.35□□□□□ -2.35
Brf1Q8CFK2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.35□□□□□ -2.35
Brf1Q8CFK2 Mir1197-201ENSMUST00000117037 120 ntBASIC0.34□□□□□ -2.36
Brf1Q8CFK2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.34□□□□□ -2.36
Brf1Q8CFK2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.33□□□□□ -2.36
Brf1Q8CFK2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.32□□□□□ -2.36
Brf1Q8CFK2 Gm26359-201ENSMUST00000158873 101 ntBASIC0.32□□□□□ -2.36
Brf1Q8CFK2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.32□□□□□ -2.36
Brf1Q8CFK2 Gm43206-201ENSMUST00000197990 114 ntBASIC0.32□□□□□ -2.36
Brf1Q8CFK2 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Brf1Q8CFK2 Gm23531-201ENSMUST00000104567 68 ntBASIC0.31□□□□□ -2.36
Brf1Q8CFK2 Gm25619-201ENSMUST00000122621 104 ntBASIC0.31□□□□□ -2.36
Brf1Q8CFK2 Gm22720-201ENSMUST00000122710 87 ntBASIC0.31□□□□□ -2.36
Brf1Q8CFK2 Snora26-201ENSMUST00000175614 121 ntBASIC0.31□□□□□ -2.36
Brf1Q8CFK2 Gm23994-201ENSMUST00000158059 88 ntBASIC0.3□□□□□ -2.36
Brf1Q8CFK2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Brf1Q8CFK2 Mir224-201ENSMUST00000083608 82 ntBASIC0.3□□□□□ -2.36
Brf1Q8CFK2 Gm25609-201ENSMUST00000104019 104 ntBASIC0.29□□□□□ -2.36
Brf1Q8CFK2 Gm24868-201ENSMUST00000157265 136 ntBASIC0.29□□□□□ -2.36
Brf1Q8CFK2 Gm24199-201ENSMUST00000157808 136 ntBASIC0.29□□□□□ -2.36
Brf1Q8CFK2 Gm24077-201ENSMUST00000158183 136 ntBASIC0.29□□□□□ -2.36
Brf1Q8CFK2 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.29□□□□□ -2.36
Brf1Q8CFK2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms