Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir669h-201ENSMUST00000116944 125 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 Gm22677-201ENSMUST00000116977 108 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 Gm25622-201ENSMUST00000157217 104 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 Gm22542-201ENSMUST00000158166 95 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 Gm25307-201ENSMUST00000158885 106 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.18□□□□□ -2.38
Ccdc28bQ8CEG5 Gm24555-201ENSMUST00000104548 124 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Gm22205-201ENSMUST00000122655 71 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Gm25633-201ENSMUST00000178565 107 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Gm42677-201ENSMUST00000196363 127 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.17□□□□□ -2.38
Ccdc28bQ8CEG5 Mir450b-201ENSMUST00000102095 82 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Gm25787-201ENSMUST00000104709 92 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Gm24833-201ENSMUST00000116775 120 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Gm23783-201ENSMUST00000157941 102 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Gm23020-201ENSMUST00000158766 253 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Gm44328-201ENSMUST00000199331 75 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.16□□□□□ -2.38
Ccdc28bQ8CEG5 Mir710-201ENSMUST00000102088 110 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm14533-201ENSMUST00000117088 93 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm23788-201ENSMUST00000122535 106 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm22431-201ENSMUST00000158545 107 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm23821-201ENSMUST00000158738 106 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25229-201ENSMUST00000178587 79 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Mir7077-201ENSMUST00000183991 57 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm27639-201ENSMUST00000184937 85 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm43038-201ENSMUST00000202359 88 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.15□□□□□ -2.39
Ccdc28bQ8CEG5 Gm24580-201ENSMUST00000103965 131 ntBASIC0.14□□□□□ -2.39
Ccdc28bQ8CEG5 Gm22845-201ENSMUST00000157712 104 ntBASIC0.14□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25952-201ENSMUST00000175329 74 ntBASIC0.14□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25993-201ENSMUST00000175391 80 ntBASIC0.14□□□□□ -2.39
Ccdc28bQ8CEG5 Mir224-201ENSMUST00000083608 82 ntBASIC0.14□□□□□ -2.39
Ccdc28bQ8CEG5 Gm24183-201ENSMUST00000122572 93 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Gm24288-201ENSMUST00000157630 144 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25870-201ENSMUST00000179845 79 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Mir219b-201ENSMUST00000198317 65 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Gm44490-201ENSMUST00000198566 127 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25696-201ENSMUST00000082900 105 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Mir5117-201ENSMUST00000083226 84 ntBASIC0.13□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25161-201ENSMUST00000158913 132 ntBASIC0.12□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25991-201ENSMUST00000102439 99 ntBASIC0.11□□□□□ -2.39
Ccdc28bQ8CEG5 Gm24650-201ENSMUST00000157105 103 ntBASIC0.11□□□□□ -2.39
Ccdc28bQ8CEG5 Gm22605-201ENSMUST00000158289 108 ntBASIC0.11□□□□□ -2.39
Ccdc28bQ8CEG5 Gm25328-201ENSMUST00000175013 107 ntBASIC0.11□□□□□ -2.39
Ccdc28bQ8CEG5 Gm26441-201ENSMUST00000082590 104 ntBASIC0.11□□□□□ -2.39
Ccdc28bQ8CEG5 Gm24796-201ENSMUST00000104007 107 ntBASIC0.1□□□□□ -2.39
Ccdc28bQ8CEG5 Snord67-201ENSMUST00000104033 111 ntBASIC0.1□□□□□ -2.39
Ccdc28bQ8CEG5 Gm45617-201ENSMUST00000211132 209 ntBASIC0.1□□□□□ -2.39
Ccdc28bQ8CEG5 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.1□□□□□ -2.39
Ccdc28bQ8CEG5 Gm23347-201ENSMUST00000083823 82 ntBASIC0.1□□□□□ -2.39
Ccdc28bQ8CEG5 Mir1197-201ENSMUST00000117037 120 ntBASIC0.09□□□□□ -2.4
Ccdc28bQ8CEG5 Gm24637-201ENSMUST00000158674 85 ntBASIC0.09□□□□□ -2.4
Ccdc28bQ8CEG5 Gm29432-201ENSMUST00000185397 139 ntBASIC0.09□□□□□ -2.4
Ccdc28bQ8CEG5 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.09□□□□□ -2.4
Ccdc28bQ8CEG5 Mir382-201ENSMUST00000083494 76 ntBASIC0.09□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22720-201ENSMUST00000122710 87 ntBASIC0.08□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25247-201ENSMUST00000175475 90 ntBASIC0.08□□□□□ -2.4
Ccdc28bQ8CEG5 Gm27975-201ENSMUST00000184400 101 ntBASIC0.08□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25791-201ENSMUST00000083292 137 ntBASIC0.08□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22340-201ENSMUST00000157717 114 ntBASIC0.07□□□□□ -2.4
Ccdc28bQ8CEG5 Gm23761-201ENSMUST00000158347 104 ntBASIC0.07□□□□□ -2.4
Ccdc28bQ8CEG5 Gm23531-201ENSMUST00000104567 68 ntBASIC0.06□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25375-201ENSMUST00000158157 135 ntBASIC0.06□□□□□ -2.4
Ccdc28bQ8CEG5 Mir6896-201ENSMUST00000198033 73 ntBASIC0.06□□□□□ -2.4
Ccdc28bQ8CEG5 Gm26207-201ENSMUST00000082909 104 ntBASIC0.06□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22251-201ENSMUST00000083216 107 ntBASIC0.06□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22368-201ENSMUST00000102416 109 ntBASIC0.05□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25322-201ENSMUST00000122556 104 ntBASIC0.05□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22429-201ENSMUST00000158553 130 ntBASIC0.05□□□□□ -2.4
Ccdc28bQ8CEG5 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Ccdc28bQ8CEG5 Gm14947-201ENSMUST00000133704 303 ntBASIC0.04□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25296-201ENSMUST00000082566 67 ntBASIC0.04□□□□□ -2.4
Ccdc28bQ8CEG5 Gm25798-201ENSMUST00000082641 107 ntBASIC0.04□□□□□ -2.4
Ccdc28bQ8CEG5 Gm37750-201ENSMUST00000193563 129 ntBASIC0.03□□□□□ -2.4
Ccdc28bQ8CEG5 Snord85-201ENSMUST00000083262 73 ntBASIC0.03□□□□□ -2.4
Ccdc28bQ8CEG5 Gm22354-201ENSMUST00000083919 70 ntBASIC0.03□□□□□ -2.4
Ccdc28bQ8CEG5 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.03□□□□□ -2.4
Ccdc28bQ8CEG5 Mir363-201ENSMUST00000093598 75 ntBASIC0.03□□□□□ -2.4
Ccdc28bQ8CEG5 Gm24064-201ENSMUST00000157486 106 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm22729-201ENSMUST00000158088 129 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm22838-201ENSMUST00000158437 99 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm26359-201ENSMUST00000158873 101 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm24218-201ENSMUST00000180163 105 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm38208-201ENSMUST00000192476 114 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Gm24445-201ENSMUST00000083981 107 ntBASIC0.02□□□□□ -2.41
Ccdc28bQ8CEG5 Mir3089-201ENSMUST00000175350 84 ntBASIC0.01□□□□□ -2.41
Ccdc28bQ8CEG5 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.01□□□□□ -2.41
Ccdc28bQ8CEG5 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Ccdc28bQ8CEG5 Gm25609-201ENSMUST00000104019 104 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Gm25619-201ENSMUST00000122621 104 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Gm25522-201ENSMUST00000158394 105 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Mir3967-201ENSMUST00000198710 68 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Gm45655-201ENSMUST00000211625 160 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Gm22455-201ENSMUST00000082580 71 ntBASIC0□□□□□ -2.41
Ccdc28bQ8CEG5 Gm24134-201ENSMUST00000083361 71 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 174.4 ms