Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm24865-201ENSMUST00000103246 96 ntBASIC1,44□□□□□ -2,18
Ptcd1Q8C2E4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,44□□□□□ -2,18
Ptcd1Q8C2E4 Gm11333-201ENSMUST00000119479 148 ntBASIC1,44□□□□□ -2,18
Ptcd1Q8C2E4 Gm25964-201ENSMUST00000157171 97 ntBASIC1,44□□□□□ -2,18
Ptcd1Q8C2E4 Gm22485-201ENSMUST00000157990 109 ntBASIC1,44□□□□□ -2,18
Ptcd1Q8C2E4 AC158537.2-201ENSMUST00000223575 150 ntBASIC1,42□□□□□ -2,18
Ptcd1Q8C2E4 Gm44483-201ENSMUST00000197203 97 ntBASIC1,41□□□□□ -2,18
Ptcd1Q8C2E4 Snord95-201ENSMUST00000082846 68 ntBASIC1,41□□□□□ -2,18
Ptcd1Q8C2E4 Snord32a-201ENSMUST00000083285 83 ntBASIC1,41□□□□□ -2,18
Ptcd1Q8C2E4 Gm23203-201ENSMUST00000104374 107 ntBASIC1,4□□□□□ -2,19
Ptcd1Q8C2E4 Mir1197-201ENSMUST00000117037 120 ntBASIC1,4□□□□□ -2,19
Ptcd1Q8C2E4 Gm25328-201ENSMUST00000175013 107 ntBASIC1,4□□□□□ -2,19
Ptcd1Q8C2E4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,4□□□□□ -2,19
Ptcd1Q8C2E4 Gm22980-201ENSMUST00000082608 70 ntBASIC1,4□□□□□ -2,19
Ptcd1Q8C2E4 Gm24321-201ENSMUST00000175348 80 ntBASIC1,39□□□□□ -2,19
Ptcd1Q8C2E4 Gm25756-201ENSMUST00000103990 136 ntBASIC1,38□□□□□ -2,19
Ptcd1Q8C2E4 Gm23893-201ENSMUST00000158106 134 ntBASIC1,38□□□□□ -2,19
Ptcd1Q8C2E4 Gm22413-201ENSMUST00000175465 85 ntBASIC1,38□□□□□ -2,19
Ptcd1Q8C2E4 Gm27943-201ENSMUST00000184844 116 ntBASIC1,38□□□□□ -2,19
Ptcd1Q8C2E4 Gm23376-201ENSMUST00000082938 160 ntBASIC1,38□□□□□ -2,19
Ptcd1Q8C2E4 Mir669h-201ENSMUST00000116944 125 ntBASIC1,37□□□□□ -2,19
Ptcd1Q8C2E4 Gm23306-201ENSMUST00000179058 105 ntBASIC1,37□□□□□ -2,19
Ptcd1Q8C2E4 Gm24134-201ENSMUST00000083361 71 ntBASIC1,37□□□□□ -2,19
Ptcd1Q8C2E4 Mir27b-201ENSMUST00000083541 73 ntBASIC1,37□□□□□ -2,19
Ptcd1Q8C2E4 Gm29432-201ENSMUST00000185397 139 ntBASIC1,36□□□□□ -2,19
Ptcd1Q8C2E4 Snord35a-201ENSMUST00000083884 90 ntBASIC1,36□□□□□ -2,19
Ptcd1Q8C2E4 Gm25161-201ENSMUST00000158913 132 ntBASIC1,35□□□□□ -2,19
Ptcd1Q8C2E4 Gm25894-201ENSMUST00000083458 75 ntBASIC1,35□□□□□ -2,19
Ptcd1Q8C2E4 Gm23761-201ENSMUST00000158347 104 ntBASIC1,34□□□□□ -2,19
Ptcd1Q8C2E4 Mir741-201ENSMUST00000103931 71 ntBASIC1,33□□□□□ -2,2
Ptcd1Q8C2E4 Mir6364-201ENSMUST00000183396 86 ntBASIC1,33□□□□□ -2,2
Ptcd1Q8C2E4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,33□□□□□ -2,2
Ptcd1Q8C2E4 Mir126a-201ENSMUST00000083606 73 ntBASIC1,33□□□□□ -2,2
Ptcd1Q8C2E4 Gm24580-201ENSMUST00000103965 131 ntBASIC1,32□□□□□ -2,2
Ptcd1Q8C2E4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1,32□□□□□ -2,2
Ptcd1Q8C2E4 Mir6381-201ENSMUST00000183426 87 ntBASIC1,32□□□□□ -2,2
Ptcd1Q8C2E4 Mir7079-201ENSMUST00000184697 69 ntBASIC1,32□□□□□ -2,2
Ptcd1Q8C2E4 Mir200a-201ENSMUST00000083466 90 ntBASIC1,32□□□□□ -2,2
Ptcd1Q8C2E4 Gm24678-201ENSMUST00000158756 104 ntBASIC1,31□□□□□ -2,2
Ptcd1Q8C2E4 Gm26363-201ENSMUST00000158866 83 ntBASIC1,31□□□□□ -2,2
Ptcd1Q8C2E4 Gm23008-201ENSMUST00000158946 80 ntBASIC1,31□□□□□ -2,2
Ptcd1Q8C2E4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,31□□□□□ -2,2
Ptcd1Q8C2E4 Mir695-201ENSMUST00000102261 109 ntBASIC1,3□□□□□ -2,2
Ptcd1Q8C2E4 Gm25656-201ENSMUST00000158466 66 ntBASIC1,3□□□□□ -2,2
Ptcd1Q8C2E4 Mir3108-201ENSMUST00000175500 79 ntBASIC1,3□□□□□ -2,2
Ptcd1Q8C2E4 Gm23783-201ENSMUST00000157941 102 ntBASIC1,29□□□□□ -2,2
Ptcd1Q8C2E4 Gm26438-201ENSMUST00000082593 107 ntBASIC1,29□□□□□ -2,2
Ptcd1Q8C2E4 Gm26338-201ENSMUST00000102372 110 ntBASIC1,28□□□□□ -2,2
Ptcd1Q8C2E4 Gm45655-201ENSMUST00000211625 160 ntBASIC1,28□□□□□ -2,2
Ptcd1Q8C2E4 Mir22-201ENSMUST00000083595 95 ntBASIC1,28□□□□□ -2,2
Ptcd1Q8C2E4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,27□□□□□ -2,21
Ptcd1Q8C2E4 Gm44455-201ENSMUST00000200061 82 ntBASIC1,27□□□□□ -2,21
Ptcd1Q8C2E4 Gm22095-201ENSMUST00000158984 150 ntBASIC1,26□□□□□ -2,21
Ptcd1Q8C2E4 Gm27549-201ENSMUST00000183508 62 ntBASIC1,26□□□□□ -2,21
Ptcd1Q8C2E4 Gm27980-201ENSMUST00000184094 169 ntBASIC1,26□□□□□ -2,21
Ptcd1Q8C2E4 Gm42677-201ENSMUST00000196363 127 ntBASIC1,26□□□□□ -2,21
Ptcd1Q8C2E4 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,26□□□□□ -2,21
Ptcd1Q8C2E4 Gm24579-201ENSMUST00000103964 144 ntBASIC1,25□□□□□ -2,21
Ptcd1Q8C2E4 Gm23237-201ENSMUST00000104639 92 ntBASIC1,25□□□□□ -2,21
Ptcd1Q8C2E4 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,25□□□□□ -2,21
Ptcd1Q8C2E4 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1,24□□□□□ -2,21
Ptcd1Q8C2E4 Gm23726-201ENSMUST00000178937 67 ntBASIC1,24□□□□□ -2,21
Ptcd1Q8C2E4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,23□□□□□ -2,21
Ptcd1Q8C2E4 Gm14533-201ENSMUST00000117088 93 ntBASIC1,23□□□□□ -2,21
Ptcd1Q8C2E4 Gm24020-201ENSMUST00000180156 108 ntBASIC1,23□□□□□ -2,21
Ptcd1Q8C2E4 Gm20305-201ENSMUST00000193226 177 ntBASIC1,23□□□□□ -2,21
Ptcd1Q8C2E4 Gm44327-201ENSMUST00000200068 117 ntBASIC1,22□□□□□ -2,21
Ptcd1Q8C2E4 Gm24445-201ENSMUST00000083981 107 ntBASIC1,22□□□□□ -2,21
Ptcd1Q8C2E4 Gm25055-201ENSMUST00000157369 76 ntBASIC1,21□□□□□ -2,22
Ptcd1Q8C2E4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1,21□□□□□ -2,22
Ptcd1Q8C2E4 Gm24918-201ENSMUST00000083022 130 ntBASIC1,21□□□□□ -2,22
Ptcd1Q8C2E4 Mir362-201ENSMUST00000093592 65 ntBASIC1,21□□□□□ -2,22
Ptcd1Q8C2E4 Gm13577-201ENSMUST00000121365 205 ntBASIC1,2□□□□□ -2,22
Ptcd1Q8C2E4 Gm24378-201ENSMUST00000122699 106 ntBASIC1,2□□□□□ -2,22
Ptcd1Q8C2E4 Gm23126-201ENSMUST00000104260 134 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Gm25378-201ENSMUST00000104333 129 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Mir1904-201ENSMUST00000122702 80 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Mir3064-201ENSMUST00000175532 67 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Mir219b-201ENSMUST00000198317 65 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Gm22303-201ENSMUST00000082686 122 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Snord33-201ENSMUST00000083694 84 ntBASIC1,19□□□□□ -2,22
Ptcd1Q8C2E4 Mir876-201ENSMUST00000104659 81 ntBASIC1,17□□□□□ -2,22
Ptcd1Q8C2E4 Gm22340-201ENSMUST00000157717 114 ntBASIC1,17□□□□□ -2,22
Ptcd1Q8C2E4 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,17□□□□□ -2,22
Ptcd1Q8C2E4 Mir7091-201ENSMUST00000184075 79 ntBASIC1,16□□□□□ -2,22
Ptcd1Q8C2E4 Mir6380-201ENSMUST00000184334 81 ntBASIC1,16□□□□□ -2,22
Ptcd1Q8C2E4 Gm24920-201ENSMUST00000083018 85 ntBASIC1,15□□□□□ -2,23
Ptcd1Q8C2E4 Gm25847-201ENSMUST00000116793 96 ntBASIC1,14□□□□□ -2,23
Ptcd1Q8C2E4 Gm23477-201ENSMUST00000158882 128 ntBASIC1,14□□□□□ -2,23
Ptcd1Q8C2E4 Gm27587-201ENSMUST00000185116 163 ntBASIC1,14□□□□□ -2,23
Ptcd1Q8C2E4 Mir7229-201ENSMUST00000197062 53 ntBASIC1,14□□□□□ -2,23
Ptcd1Q8C2E4 Gm24278-201ENSMUST00000104239 127 ntBASIC1,13□□□□□ -2,23
Ptcd1Q8C2E4 Gm23321-201ENSMUST00000104465 126 ntBASIC1,13□□□□□ -2,23
Ptcd1Q8C2E4 Gm26485-201ENSMUST00000158019 64 ntBASIC1,13□□□□□ -2,23
Ptcd1Q8C2E4 Gm27289-201ENSMUST00000183341 82 ntBASIC1,13□□□□□ -2,23
Ptcd1Q8C2E4 Gm22431-201ENSMUST00000158545 107 ntBASIC1,12□□□□□ -2,23
Ptcd1Q8C2E4 Gm27554-201ENSMUST00000185074 98 ntBASIC1,12□□□□□ -2,23
Ptcd1Q8C2E4 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,12□□□□□ -2,23
Ptcd1Q8C2E4 Gm24431-201ENSMUST00000104073 66 ntBASIC1,11□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms