Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm24271-201ENSMUST00000102327 111 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Gm23126-201ENSMUST00000104260 134 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Snord2-201ENSMUST00000157899 69 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Mir100-201ENSMUST00000175270 80 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Gm23726-201ENSMUST00000178937 67 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Mir6342-201ENSMUST00000183870 125 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Gm23245-201ENSMUST00000083370 135 ntBASIC1.06□□□□□ -2.24
Sh3rf3Q8C120 Gm6272-201ENSMUST00000121256 171 ntBASIC1.05□□□□□ -2.24
Sh3rf3Q8C120 Gm27607-201ENSMUST00000185162 122 ntBASIC1.05□□□□□ -2.24
Sh3rf3Q8C120 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.05□□□□□ -2.24
Sh3rf3Q8C120 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Gm22100-201ENSMUST00000157926 63 ntBASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Mir3064-201ENSMUST00000175532 67 ntBASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Gm24311-201ENSMUST00000082570 104 ntBASIC1.04□□□□□ -2.24
Sh3rf3Q8C120 Gm22048-201ENSMUST00000104721 89 ntBASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 Gm24378-201ENSMUST00000122699 106 ntBASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 Mir376b-201ENSMUST00000195930 82 ntBASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 Mir1949-202ENSMUST00000199259 70 ntBASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.03□□□□□ -2.24
Sh3rf3Q8C120 Gm24580-201ENSMUST00000103965 131 ntBASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm24772-201ENSMUST00000158507 110 ntBASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm23477-201ENSMUST00000158882 128 ntBASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm23008-201ENSMUST00000158946 80 ntBASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm27549-201ENSMUST00000183508 62 ntBASIC1.02□□□□□ -2.25
Sh3rf3Q8C120 Gm22233-201ENSMUST00000157464 114 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Gm23500-201ENSMUST00000157735 98 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Gm25868-201ENSMUST00000158253 114 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Gm25328-201ENSMUST00000175013 107 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Mir3079-201ENSMUST00000175428 90 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Mir219b-201ENSMUST00000198317 65 ntBASIC1.01□□□□□ -2.25
Sh3rf3Q8C120 Mir741-201ENSMUST00000103931 71 ntBASIC1□□□□□ -2.25
Sh3rf3Q8C120 Gm23989-201ENSMUST00000117030 66 ntBASIC1□□□□□ -2.25
Sh3rf3Q8C120 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1□□□□□ -2.25
Sh3rf3Q8C120 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Gm25497-201ENSMUST00000104425 132 ntBASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Gm23853-201ENSMUST00000158375 104 ntBASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Gm22431-201ENSMUST00000158545 107 ntBASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Mir3108-201ENSMUST00000175500 79 ntBASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Gm25683-201ENSMUST00000083940 131 ntBASIC0.99□□□□□ -2.25
Sh3rf3Q8C120 Gm13065-201ENSMUST00000119178 141 ntBASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 Gm23893-201ENSMUST00000158106 134 ntBASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 Gm42533-201ENSMUST00000196247 157 ntBASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 Mir27b-201ENSMUST00000083541 73 ntBASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Sh3rf3Q8C120 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.97□□□□□ -2.25
Sh3rf3Q8C120 Gm24233-201ENSMUST00000104317 122 ntBASIC0.97□□□□□ -2.25
Sh3rf3Q8C120 Gm27717-201ENSMUST00000183933 151 ntBASIC0.97□□□□□ -2.25
Sh3rf3Q8C120 Gm22652-201ENSMUST00000083207 131 ntBASIC0.97□□□□□ -2.25
Sh3rf3Q8C120 Gm23012-201ENSMUST00000104149 83 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm23321-201ENSMUST00000104465 126 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm22520-201ENSMUST00000158269 129 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm22074-201ENSMUST00000158595 113 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm25300-201ENSMUST00000175284 84 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Mir6380-201ENSMUST00000184334 81 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm44211-201ENSMUST00000204867 145 ntBASIC0.96□□□□□ -2.26
Sh3rf3Q8C120 Gm13577-201ENSMUST00000121365 205 ntBASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Gm24331-201ENSMUST00000175099 67 ntBASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Gm23801-201ENSMUST00000175561 67 ntBASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Gm24485-201ENSMUST00000178283 67 ntBASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Gm29432-201ENSMUST00000185397 139 ntBASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Sh3rf3Q8C120 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.94□□□□□ -2.26
Sh3rf3Q8C120 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.94□□□□□ -2.26
Sh3rf3Q8C120 Gm45655-201ENSMUST00000211625 160 ntBASIC0.94□□□□□ -2.26
Sh3rf3Q8C120 Gm23416-201ENSMUST00000175520 95 ntBASIC0.93□□□□□ -2.26
Sh3rf3Q8C120 Gm26438-201ENSMUST00000082593 107 ntBASIC0.93□□□□□ -2.26
Sh3rf3Q8C120 Gm25138-201ENSMUST00000083248 136 ntBASIC0.93□□□□□ -2.26
Sh3rf3Q8C120 Gm23856-201ENSMUST00000158380 99 ntBASIC0.92□□□□□ -2.26
Sh3rf3Q8C120 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.92□□□□□ -2.26
Sh3rf3Q8C120 Gm27587-201ENSMUST00000185116 163 ntBASIC0.92□□□□□ -2.26
Sh3rf3Q8C120 Snord95-201ENSMUST00000082846 68 ntBASIC0.92□□□□□ -2.26
Sh3rf3Q8C120 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.91□□□□□ -2.26
Sh3rf3Q8C120 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Sh3rf3Q8C120 Mir669h-201ENSMUST00000116944 125 ntBASIC0.91□□□□□ -2.26
Sh3rf3Q8C120 Mir15a-201ENSMUST00000175266 84 ntBASIC0.91□□□□□ -2.26
Sh3rf3Q8C120 Mir7010-201ENSMUST00000183464 63 ntBASIC0.91□□□□□ -2.26
Sh3rf3Q8C120 Gm24431-201ENSMUST00000104073 66 ntBASIC0.9□□□□□ -2.27
Sh3rf3Q8C120 Gm24467-201ENSMUST00000157887 126 ntBASIC0.9□□□□□ -2.27
Sh3rf3Q8C120 Gm27974-201ENSMUST00000183415 105 ntBASIC0.9□□□□□ -2.27
Sh3rf3Q8C120 Snord45b-201ENSMUST00000082797 71 ntBASIC0.9□□□□□ -2.27
Sh3rf3Q8C120 Gm22689-201ENSMUST00000102452 110 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 Gm25552-201ENSMUST00000158081 91 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 Gm23180-201ENSMUST00000158686 125 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 Gm20386-201ENSMUST00000174010 132 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 Gm27937-201ENSMUST00000183605 88 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 Gm24920-201ENSMUST00000083018 85 ntBASIC0.89□□□□□ -2.27
Sh3rf3Q8C120 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 Mir7673-201ENSMUST00000184567 64 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 Gm25894-201ENSMUST00000083458 75 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 Mir494-201ENSMUST00000093632 85 ntBASIC0.88□□□□□ -2.27
Sh3rf3Q8C120 Gm25055-201ENSMUST00000157369 76 ntBASIC0.87□□□□□ -2.27
Sh3rf3Q8C120 Gm25375-201ENSMUST00000158157 135 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 246.4 ms