Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mir6342-201ENSMUST00000183870 125 ntBASIC1.47□□□□□ -2.17
Usp40Q8BWR4 Mir376b-201ENSMUST00000195930 82 ntBASIC1.47□□□□□ -2.17
Usp40Q8BWR4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.46□□□□□ -2.18
Usp40Q8BWR4 Gm26438-201ENSMUST00000082593 107 ntBASIC1.46□□□□□ -2.18
Usp40Q8BWR4 Gm25524-201ENSMUST00000101821 107 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm23130-201ENSMUST00000104252 74 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm25010-201ENSMUST00000158403 65 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm25641-201ENSMUST00000175135 108 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm43944-201ENSMUST00000205220 120 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm23301-201ENSMUST00000082713 65 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Mir3071-201ENSMUST00000093621 80 ntBASIC1.45□□□□□ -2.18
Usp40Q8BWR4 Gm23012-201ENSMUST00000104149 83 ntBASIC1.44□□□□□ -2.18
Usp40Q8BWR4 Gm25416-201ENSMUST00000104221 107 ntBASIC1.44□□□□□ -2.18
Usp40Q8BWR4 Snord96a-201ENSMUST00000082791 81 ntBASIC1.44□□□□□ -2.18
Usp40Q8BWR4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Usp40Q8BWR4 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
Usp40Q8BWR4 Gm22466-201ENSMUST00000175278 69 ntBASIC1.43□□□□□ -2.18
Usp40Q8BWR4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.43□□□□□ -2.18
Usp40Q8BWR4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Usp40Q8BWR4 Gm23060-201ENSMUST00000102345 109 ntBASIC1.42□□□□□ -2.18
Usp40Q8BWR4 Gm25968-201ENSMUST00000157167 100 ntBASIC1.42□□□□□ -2.18
Usp40Q8BWR4 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.41□□□□□ -2.18
Usp40Q8BWR4 Gm22785-201ENSMUST00000104087 132 ntBASIC1.41□□□□□ -2.18
Usp40Q8BWR4 Mir100-201ENSMUST00000175270 80 ntBASIC1.41□□□□□ -2.18
Usp40Q8BWR4 Gm22717-201ENSMUST00000122703 171 ntBASIC1.4□□□□□ -2.19
Usp40Q8BWR4 Snord13-201ENSMUST00000157627 104 ntBASIC1.4□□□□□ -2.19
Usp40Q8BWR4 Gm24549-201ENSMUST00000158647 139 ntBASIC1.4□□□□□ -2.19
Usp40Q8BWR4 Snord95-201ENSMUST00000082846 68 ntBASIC1.4□□□□□ -2.19
Usp40Q8BWR4 Mir500-201ENSMUST00000093600 92 ntBASIC1.4□□□□□ -2.19
Usp40Q8BWR4 Gm42506-201ENSMUST00000202009 150 ntBASIC1.39□□□□□ -2.19
Usp40Q8BWR4 Mir448-201ENSMUST00000083516 112 ntBASIC1.39□□□□□ -2.19
Usp40Q8BWR4 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.39□□□□□ -2.19
Usp40Q8BWR4 Gm23708-201ENSMUST00000104367 123 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Gm23410-201ENSMUST00000179967 107 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Mir6394-201ENSMUST00000184738 99 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Mir1949-202ENSMUST00000199259 70 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Gm22505-201ENSMUST00000082956 108 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Gm22363-201ENSMUST00000083100 108 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Gm23814-201ENSMUST00000083230 102 ntBASIC1.38□□□□□ -2.19
Usp40Q8BWR4 Gm25087-201ENSMUST00000101992 78 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Snord71-201ENSMUST00000104361 85 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Mir669h-201ENSMUST00000116944 125 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Gm22663-201ENSMUST00000158721 102 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Mir27b-201ENSMUST00000083541 73 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Gm26467-201ENSMUST00000097257 78 ntBASIC1.37□□□□□ -2.19
Usp40Q8BWR4 Gm26274-201ENSMUST00000157103 321 ntBASIC1.36□□□□□ -2.19
Usp40Q8BWR4 Gm29344-201ENSMUST00000068143 210 ntBASIC1.36□□□□□ -2.19
Usp40Q8BWR4 Mir324-201ENSMUST00000083600 89 ntBASIC1.36□□□□□ -2.19
Usp40Q8BWR4 Gm23961-201ENSMUST00000104685 97 ntBASIC1.35□□□□□ -2.19
Usp40Q8BWR4 Gm22720-201ENSMUST00000122710 87 ntBASIC1.35□□□□□ -2.19
Usp40Q8BWR4 Gm25055-201ENSMUST00000157369 76 ntBASIC1.35□□□□□ -2.19
Usp40Q8BWR4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.35□□□□□ -2.19
Usp40Q8BWR4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.34□□□□□ -2.19
Usp40Q8BWR4 Gm22474-201ENSMUST00000179407 107 ntBASIC1.34□□□□□ -2.19
Usp40Q8BWR4 Gm16399-201ENSMUST00000181423 219 ntBASIC1.34□□□□□ -2.19
Usp40Q8BWR4 Gm26224-201ENSMUST00000082506 80 ntBASIC1.34□□□□□ -2.19
Usp40Q8BWR4 Mir30a-201ENSMUST00000083471 71 ntBASIC1.34□□□□□ -2.19
Usp40Q8BWR4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Usp40Q8BWR4 Gm24233-201ENSMUST00000104317 122 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm13065-201ENSMUST00000119178 141 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm6272-201ENSMUST00000121256 171 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm24288-201ENSMUST00000157630 144 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm22520-201ENSMUST00000158269 129 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm38323-201ENSMUST00000192450 210 ntBASIC1.33□□□□□ -2.2
Usp40Q8BWR4 Gm22565-201ENSMUST00000175540 69 ntBASIC1.32□□□□□ -2.2
Usp40Q8BWR4 Gm24797-201ENSMUST00000178103 107 ntBASIC1.32□□□□□ -2.2
Usp40Q8BWR4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Usp40Q8BWR4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Usp40Q8BWR4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Gm23893-201ENSMUST00000158106 134 ntBASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Gm24723-201ENSMUST00000158233 132 ntBASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Gm27717-201ENSMUST00000183933 151 ntBASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Gm38274-201ENSMUST00000195689 148 ntBASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Mir7231-201ENSMUST00000196252 61 ntBASIC1.31□□□□□ -2.2
Usp40Q8BWR4 Gm25309-201ENSMUST00000116728 126 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Gm14533-201ENSMUST00000117088 93 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Gm24400-201ENSMUST00000157865 107 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Gm22165-201ENSMUST00000158414 103 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Gm26491-201ENSMUST00000179268 121 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Gm22652-201ENSMUST00000083207 131 ntBASIC1.3□□□□□ -2.2
Usp40Q8BWR4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Gm22595-201ENSMUST00000104250 130 ntBASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Gm24070-201ENSMUST00000104519 130 ntBASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Gm27420-201ENSMUST00000183823 79 ntBASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Gm44458-201ENSMUST00000196594 143 ntBASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Gm25128-201ENSMUST00000083339 76 ntBASIC1.29□□□□□ -2.2
Usp40Q8BWR4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Usp40Q8BWR4 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.28□□□□□ -2.2
Usp40Q8BWR4 Gm24377-201ENSMUST00000104398 131 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm26052-201ENSMUST00000104646 84 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm23989-201ENSMUST00000117030 66 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm24996-201ENSMUST00000158390 99 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms