Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm22729-201ENSMUST00000158088 129 ntBASIC0.51□□□□□ -2.33
Ddx55Q6ZPL9 Gm22251-201ENSMUST00000083216 107 ntBASIC0.51□□□□□ -2.33
Ddx55Q6ZPL9 Mir224-201ENSMUST00000083608 82 ntBASIC0.51□□□□□ -2.33
Ddx55Q6ZPL9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm22677-201ENSMUST00000116977 108 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm22205-201ENSMUST00000122655 71 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm22605-201ENSMUST00000158289 108 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm24637-201ENSMUST00000158674 85 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm27980-201ENSMUST00000184094 169 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.5□□□□□ -2.33
Ddx55Q6ZPL9 Gm25160-201ENSMUST00000158914 102 ntBASIC0.49□□□□□ -2.33
Ddx55Q6ZPL9 Gm25696-201ENSMUST00000082900 105 ntBASIC0.49□□□□□ -2.33
Ddx55Q6ZPL9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.49□□□□□ -2.33
Ddx55Q6ZPL9 Mir670-201ENSMUST00000102380 100 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Gm25756-201ENSMUST00000103990 136 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Gm23528-201ENSMUST00000104571 132 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Gm23500-201ENSMUST00000157735 98 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Gm26441-201ENSMUST00000082590 104 ntBASIC0.48□□□□□ -2.33
Ddx55Q6ZPL9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.47□□□□□ -2.33
Ddx55Q6ZPL9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.47□□□□□ -2.33
Ddx55Q6ZPL9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.47□□□□□ -2.33
Ddx55Q6ZPL9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.47□□□□□ -2.33
Ddx55Q6ZPL9 Gm22354-201ENSMUST00000083919 70 ntBASIC0.47□□□□□ -2.33
Ddx55Q6ZPL9 Mir669h-201ENSMUST00000116944 125 ntBASIC0.46□□□□□ -2.34
Ddx55Q6ZPL9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.46□□□□□ -2.34
Ddx55Q6ZPL9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.46□□□□□ -2.34
Ddx55Q6ZPL9 Gm25656-201ENSMUST00000158466 66 ntBASIC0.46□□□□□ -2.34
Ddx55Q6ZPL9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.45□□□□□ -2.34
Ddx55Q6ZPL9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.45□□□□□ -2.34
Ddx55Q6ZPL9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.45□□□□□ -2.34
Ddx55Q6ZPL9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.44□□□□□ -2.34
Ddx55Q6ZPL9 Gm26438-201ENSMUST00000082593 107 ntBASIC0.44□□□□□ -2.34
Ddx55Q6ZPL9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.44□□□□□ -2.34
Ddx55Q6ZPL9 Gm23038-201ENSMUST00000083873 104 ntBASIC0.44□□□□□ -2.34
Ddx55Q6ZPL9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.43□□□□□ -2.34
Ddx55Q6ZPL9 Gm25055-201ENSMUST00000157369 76 ntBASIC0.43□□□□□ -2.34
Ddx55Q6ZPL9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.43□□□□□ -2.34
Ddx55Q6ZPL9 Gm25022-201ENSMUST00000102205 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Gm24183-201ENSMUST00000122572 93 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-6-201ENSMUST00000177790 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-3-201ENSMUST00000178082 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-7-201ENSMUST00000178635 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-10-201ENSMUST00000179320 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-5-201ENSMUST00000179352 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-2-201ENSMUST00000179447 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-9-201ENSMUST00000179752 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-4-201ENSMUST00000179923 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Mir467a-8-201ENSMUST00000180070 83 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Gm43038-201ENSMUST00000202359 88 ntBASIC0.42□□□□□ -2.34
Ddx55Q6ZPL9 Gm25991-201ENSMUST00000102439 99 ntBASIC0.41□□□□□ -2.34
Ddx55Q6ZPL9 Gm25328-201ENSMUST00000175013 107 ntBASIC0.41□□□□□ -2.34
Ddx55Q6ZPL9 Gm27975-201ENSMUST00000184400 101 ntBASIC0.4□□□□□ -2.35
Ddx55Q6ZPL9 Gm44803-201ENSMUST00000204384 156 ntBASIC0.4□□□□□ -2.35
Ddx55Q6ZPL9 Gm22454-201ENSMUST00000082583 107 ntBASIC0.4□□□□□ -2.35
Ddx55Q6ZPL9 Mir18-201ENSMUST00000083469 96 ntBASIC0.4□□□□□ -2.35
Ddx55Q6ZPL9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.39□□□□□ -2.35
Ddx55Q6ZPL9 Gm24884-201ENSMUST00000158784 119 ntBASIC0.39□□□□□ -2.35
Ddx55Q6ZPL9 Gm25870-201ENSMUST00000179845 79 ntBASIC0.39□□□□□ -2.35
Ddx55Q6ZPL9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.39□□□□□ -2.35
Ddx55Q6ZPL9 CT571266.1-201ENSMUST00000222859 153 ntBASIC0.39□□□□□ -2.35
Ddx55Q6ZPL9 Mir710-201ENSMUST00000102088 110 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm14533-201ENSMUST00000117088 93 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm22542-201ENSMUST00000158166 95 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Scarna8-201ENSMUST00000158333 131 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm22981-201ENSMUST00000082611 75 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm26207-201ENSMUST00000082909 104 ntBASIC0.38□□□□□ -2.35
Ddx55Q6ZPL9 Gm29432-201ENSMUST00000185397 139 ntBASIC0.37□□□□□ -2.35
Ddx55Q6ZPL9 Gm44932-201ENSMUST00000206799 121 ntBASIC0.37□□□□□ -2.35
Ddx55Q6ZPL9 Gm22950-201ENSMUST00000082776 107 ntBASIC0.37□□□□□ -2.35
Ddx55Q6ZPL9 Gm25112-201ENSMUST00000122680 104 ntBASIC0.36□□□□□ -2.35
Ddx55Q6ZPL9 Gm25993-201ENSMUST00000175391 80 ntBASIC0.36□□□□□ -2.35
Ddx55Q6ZPL9 Gm42677-201ENSMUST00000196363 127 ntBASIC0.36□□□□□ -2.35
Ddx55Q6ZPL9 Gm22805-201ENSMUST00000082739 107 ntBASIC0.36□□□□□ -2.35
Ddx55Q6ZPL9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.35□□□□□ -2.35
Ddx55Q6ZPL9 Gm23652-201ENSMUST00000116752 107 ntBASIC0.35□□□□□ -2.35
Ddx55Q6ZPL9 Gm26104-201ENSMUST00000157250 108 ntBASIC0.35□□□□□ -2.35
Ddx55Q6ZPL9 Gm26007-201ENSMUST00000158798 120 ntBASIC0.35□□□□□ -2.35
Ddx55Q6ZPL9 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.35□□□□□ -2.35
Ddx55Q6ZPL9 Gm24580-201ENSMUST00000103965 131 ntBASIC0.34□□□□□ -2.36
Ddx55Q6ZPL9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.34□□□□□ -2.36
Ddx55Q6ZPL9 Gm23468-201ENSMUST00000157125 108 ntBASIC0.34□□□□□ -2.36
Ddx55Q6ZPL9 Gm23020-201ENSMUST00000158766 253 ntBASIC0.34□□□□□ -2.36
Ddx55Q6ZPL9 Gm25307-201ENSMUST00000158885 106 ntBASIC0.34□□□□□ -2.36
Ddx55Q6ZPL9 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Ddx55Q6ZPL9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.33□□□□□ -2.36
Ddx55Q6ZPL9 Mir3108-201ENSMUST00000175500 79 ntBASIC0.32□□□□□ -2.36
Ddx55Q6ZPL9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.32□□□□□ -2.36
Ddx55Q6ZPL9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.31□□□□□ -2.36
Ddx55Q6ZPL9 Snord50a-201ENSMUST00000178154 72 ntBASIC0.31□□□□□ -2.36
Ddx55Q6ZPL9 Gm24463-201ENSMUST00000178417 72 ntBASIC0.31□□□□□ -2.36
Ddx55Q6ZPL9 Gm24162-201ENSMUST00000093665 102 ntBASIC0.31□□□□□ -2.36
Ddx55Q6ZPL9 Gm25322-201ENSMUST00000122556 104 ntBASIC0.3□□□□□ -2.36
Ddx55Q6ZPL9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Ddx55Q6ZPL9 Mir3065-201ENSMUST00000198674 87 ntBASIC0.3□□□□□ -2.36
Ddx55Q6ZPL9 Gm25296-201ENSMUST00000082566 67 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 176.4 ms