Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm38323-201ENSMUST00000192450 210 ntBASIC1,26□□□□□ -2,21
Cpsf6Q6NVF9 Gm25186-201ENSMUST00000083909 108 ntBASIC1,26□□□□□ -2,21
Cpsf6Q6NVF9 Mir301b-201ENSMUST00000102333 97 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm14533-201ENSMUST00000117088 93 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm25055-201ENSMUST00000157369 76 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm22556-201ENSMUST00000157803 100 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm27974-201ENSMUST00000183415 105 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm44211-201ENSMUST00000204867 145 ntBASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,25□□□□□ -2,21
Cpsf6Q6NVF9 Gm25832-201ENSMUST00000104140 130 ntBASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm23989-201ENSMUST00000117030 66 ntBASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm22663-201ENSMUST00000158721 102 ntBASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm22401-201ENSMUST00000174927 117 ntBASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm25138-201ENSMUST00000083248 136 ntBASIC1,24□□□□□ -2,21
Cpsf6Q6NVF9 Gm22595-201ENSMUST00000104250 130 ntBASIC1,23□□□□□ -2,21
Cpsf6Q6NVF9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,23□□□□□ -2,21
Cpsf6Q6NVF9 Gm22559-201ENSMUST00000157329 134 ntBASIC1,23□□□□□ -2,21
Cpsf6Q6NVF9 Snord13-201ENSMUST00000157627 104 ntBASIC1,23□□□□□ -2,21
Cpsf6Q6NVF9 Gm23267-201ENSMUST00000178490 132 ntBASIC1,23□□□□□ -2,21
Cpsf6Q6NVF9 Gm24865-201ENSMUST00000103246 96 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 Gm22720-201ENSMUST00000122710 87 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 Gm24808-201ENSMUST00000157993 118 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 Gm23853-201ENSMUST00000158375 104 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 Mir3071-201ENSMUST00000093621 80 ntBASIC1,22□□□□□ -2,21
Cpsf6Q6NVF9 Gm22717-201ENSMUST00000122703 171 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Gm25010-201ENSMUST00000158403 65 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Gm25715-201ENSMUST00000158627 125 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Mir7231-201ENSMUST00000196252 61 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Mir200b-201ENSMUST00000083615 70 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Mir211-201ENSMUST00000083651 106 ntBASIC1,21□□□□□ -2,22
Cpsf6Q6NVF9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,2□□□□□ -2,22
Cpsf6Q6NVF9 Gm24321-201ENSMUST00000175348 80 ntBASIC1,2□□□□□ -2,22
Cpsf6Q6NVF9 AC238676.2-201ENSMUST00000220910 94 ntBASIC1,2□□□□□ -2,22
Cpsf6Q6NVF9 Gm27711-201ENSMUST00000183802 118 ntBASIC1,19□□□□□ -2,22
Cpsf6Q6NVF9 AC129019.2-201ENSMUST00000222063 202 ntBASIC1,19□□□□□ -2,22
Cpsf6Q6NVF9 Gm29344-201ENSMUST00000068143 210 ntBASIC1,19□□□□□ -2,22
Cpsf6Q6NVF9 Gm24400-201ENSMUST00000157865 107 ntBASIC1,18□□□□□ -2,22
Cpsf6Q6NVF9 Gm22165-201ENSMUST00000158414 103 ntBASIC1,18□□□□□ -2,22
Cpsf6Q6NVF9 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,18□□□□□ -2,22
Cpsf6Q6NVF9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1,18□□□□□ -2,22
Cpsf6Q6NVF9 Gm25894-201ENSMUST00000083458 75 ntBASIC1,18□□□□□ -2,22
Cpsf6Q6NVF9 Gm22673-201ENSMUST00000104415 131 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm25656-201ENSMUST00000158466 66 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm23410-201ENSMUST00000179967 107 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm45125-201ENSMUST00000206908 151 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm22505-201ENSMUST00000082956 108 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm22363-201ENSMUST00000083100 108 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Gm23814-201ENSMUST00000083230 102 ntBASIC1,17□□□□□ -2,22
Cpsf6Q6NVF9 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1,16□□□□□ -2,22
Cpsf6Q6NVF9 Gm22485-201ENSMUST00000157990 109 ntBASIC1,16□□□□□ -2,22
Cpsf6Q6NVF9 Gm24076-201ENSMUST00000158179 94 ntBASIC1,16□□□□□ -2,22
Cpsf6Q6NVF9 Gm42845-201ENSMUST00000197766 105 ntBASIC1,16□□□□□ -2,22
Cpsf6Q6NVF9 Gm23245-201ENSMUST00000083370 135 ntBASIC1,16□□□□□ -2,22
Cpsf6Q6NVF9 Gm24271-201ENSMUST00000102327 111 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm25309-201ENSMUST00000116728 126 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm24942-201ENSMUST00000158328 114 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm22074-201ENSMUST00000158595 113 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm23967-201ENSMUST00000175062 78 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm25993-201ENSMUST00000175391 80 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Mir7063-201ENSMUST00000184158 91 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm38274-201ENSMUST00000195689 148 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm42677-201ENSMUST00000196363 127 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm44483-201ENSMUST00000197203 97 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Mir448-201ENSMUST00000083516 112 ntBASIC1,15□□□□□ -2,23
Cpsf6Q6NVF9 Gm25524-201ENSMUST00000101821 107 ntBASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm25296-201ENSMUST00000082566 67 ntBASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm22980-201ENSMUST00000082608 70 ntBASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm22298-201ENSMUST00000082662 133 ntBASIC1,14□□□□□ -2,23
Cpsf6Q6NVF9 Gm24070-201ENSMUST00000104519 130 ntBASIC1,13□□□□□ -2,23
Cpsf6Q6NVF9 Mir15a-201ENSMUST00000175266 84 ntBASIC1,13□□□□□ -2,23
Cpsf6Q6NVF9 Gm23630-201ENSMUST00000175292 104 ntBASIC1,13□□□□□ -2,23
Cpsf6Q6NVF9 Gm27980-201ENSMUST00000184094 169 ntBASIC1,13□□□□□ -2,23
Cpsf6Q6NVF9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1,13□□□□□ -2,23
Cpsf6Q6NVF9 Gm25274-201ENSMUST00000104296 135 ntBASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Gm25465-201ENSMUST00000157716 105 ntBASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Gm22474-201ENSMUST00000179407 107 ntBASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Gm42533-201ENSMUST00000196247 157 ntBASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1,12□□□□□ -2,23
Cpsf6Q6NVF9 Gm26375-201ENSMUST00000101829 106 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Mir717-201ENSMUST00000102259 109 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Gm25170-201ENSMUST00000104191 129 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Gm22965-201ENSMUST00000157958 101 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Gm24723-201ENSMUST00000158233 132 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Mir7010-201ENSMUST00000183464 63 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 Gm44455-201ENSMUST00000200061 82 ntBASIC1,11□□□□□ -2,23
Cpsf6Q6NVF9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,1□□□□□ -2,23
Cpsf6Q6NVF9 Gm44327-201ENSMUST00000200068 117 ntBASIC1,1□□□□□ -2,23
Cpsf6Q6NVF9 Gm25087-201ENSMUST00000101992 78 ntBASIC1,09□□□□□ -2,23
Cpsf6Q6NVF9 Gm24342-201ENSMUST00000103907 104 ntBASIC1,09□□□□□ -2,23
Cpsf6Q6NVF9 Gm26082-201ENSMUST00000104070 127 ntBASIC1,09□□□□□ -2,23
Cpsf6Q6NVF9 Mir3968-201ENSMUST00000175355 100 ntBASIC1,09□□□□□ -2,23
Cpsf6Q6NVF9 Gm28794-201ENSMUST00000185276 136 ntBASIC1,09□□□□□ -2,23
Cpsf6Q6NVF9 Gm24259-201ENSMUST00000083740 107 ntBASIC1,09□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 100,5 ms