Protein–RNA interactions for Protein: Q62226

Shh, Sonic hedgehog protein, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShhQ62226 Gm22845-201ENSMUST00000157712 104 ntBASIC0.43□□□□□ -2.34
ShhQ62226 Gm25160-201ENSMUST00000158914 102 ntBASIC0.43□□□□□ -2.34
ShhQ62226 Gm22239-201ENSMUST00000175220 103 ntBASIC0.43□□□□□ -2.34
ShhQ62226 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
ShhQ62226 Gm25289-201ENSMUST00000122799 119 ntBASIC0.42□□□□□ -2.34
ShhQ62226 Gm26425-201ENSMUST00000122529 82 ntBASIC0.41□□□□□ -2.34
ShhQ62226 Gm22203-201ENSMUST00000158605 58 ntBASIC0.4□□□□□ -2.35
ShhQ62226 Gm25449-201ENSMUST00000179389 79 ntBASIC0.4□□□□□ -2.35
ShhQ62226 Gm27686-201ENSMUST00000185123 91 ntBASIC0.4□□□□□ -2.35
ShhQ62226 Gm44345-201ENSMUST00000199560 135 ntBASIC0.4□□□□□ -2.35
ShhQ62226 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
ShhQ62226 Gm23036-201ENSMUST00000157885 99 ntBASIC0.39□□□□□ -2.35
ShhQ62226 Gm22983-201ENSMUST00000158308 104 ntBASIC0.39□□□□□ -2.35
ShhQ62226 Gm23349-201ENSMUST00000158432 98 ntBASIC0.39□□□□□ -2.35
ShhQ62226 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.39□□□□□ -2.35
ShhQ62226 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.39□□□□□ -2.35
ShhQ62226 Gm23749-201ENSMUST00000104223 131 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Gm23528-201ENSMUST00000104571 132 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Gm22406-201ENSMUST00000174923 93 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Gm29047-201ENSMUST00000189816 108 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Snord95-201ENSMUST00000082846 68 ntBASIC0.38□□□□□ -2.35
ShhQ62226 Mir710-201ENSMUST00000102088 110 ntBASIC0.37□□□□□ -2.35
ShhQ62226 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
ShhQ62226 Gm22732-201ENSMUST00000158093 121 ntBASIC0.37□□□□□ -2.35
ShhQ62226 Gm23369-201ENSMUST00000175406 105 ntBASIC0.37□□□□□ -2.35
ShhQ62226 Gm20108-201ENSMUST00000219977 153 ntBASIC0.37□□□□□ -2.35
ShhQ62226 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
ShhQ62226 Gm24384-201ENSMUST00000122693 75 ntBASIC0.36□□□□□ -2.35
ShhQ62226 Gm24650-201ENSMUST00000157105 103 ntBASIC0.36□□□□□ -2.35
ShhQ62226 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.36□□□□□ -2.35
ShhQ62226 Gm22677-201ENSMUST00000116977 108 ntBASIC0.35□□□□□ -2.35
ShhQ62226 Gm25656-201ENSMUST00000158466 66 ntBASIC0.35□□□□□ -2.35
ShhQ62226 Gm27977-201ENSMUST00000185159 111 ntBASIC0.35□□□□□ -2.35
ShhQ62226 Gm26438-201ENSMUST00000082593 107 ntBASIC0.35□□□□□ -2.35
ShhQ62226 Gm23500-201ENSMUST00000157735 98 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Gm24884-201ENSMUST00000158784 119 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Gm26007-201ENSMUST00000158798 120 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Mir3089-201ENSMUST00000175350 84 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Gm42845-201ENSMUST00000197766 105 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Gm44803-201ENSMUST00000204384 156 ntBASIC0.34□□□□□ -2.36
ShhQ62226 Gm25756-201ENSMUST00000103990 136 ntBASIC0.33□□□□□ -2.36
ShhQ62226 Gm24183-201ENSMUST00000122572 93 ntBASIC0.33□□□□□ -2.36
ShhQ62226 Gm22205-201ENSMUST00000122655 71 ntBASIC0.33□□□□□ -2.36
ShhQ62226 Gm25229-201ENSMUST00000178587 79 ntBASIC0.33□□□□□ -2.36
ShhQ62226 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.32□□□□□ -2.36
ShhQ62226 Gm25055-201ENSMUST00000157369 76 ntBASIC0.32□□□□□ -2.36
ShhQ62226 Gm27475-201ENSMUST00000183420 61 ntBASIC0.32□□□□□ -2.36
ShhQ62226 Mir7065-201ENSMUST00000185110 61 ntBASIC0.32□□□□□ -2.36
ShhQ62226 Gm25622-201ENSMUST00000157217 104 ntBASIC0.31□□□□□ -2.36
ShhQ62226 Gm27639-201ENSMUST00000184937 85 ntBASIC0.31□□□□□ -2.36
ShhQ62226 Mir5117-201ENSMUST00000083226 84 ntBASIC0.31□□□□□ -2.36
ShhQ62226 Gm22605-201ENSMUST00000158289 108 ntBASIC0.29□□□□□ -2.36
ShhQ62226 Scarna8-201ENSMUST00000158333 131 ntBASIC0.29□□□□□ -2.36
ShhQ62226 Mir3065-201ENSMUST00000198674 87 ntBASIC0.29□□□□□ -2.36
ShhQ62226 Mir18-201ENSMUST00000083469 96 ntBASIC0.29□□□□□ -2.36
ShhQ62226 Gm22429-201ENSMUST00000158553 130 ntBASIC0.28□□□□□ -2.36
ShhQ62226 Gm24637-201ENSMUST00000158674 85 ntBASIC0.28□□□□□ -2.36
ShhQ62226 Gm22981-201ENSMUST00000082611 75 ntBASIC0.28□□□□□ -2.36
ShhQ62226 Gm24580-201ENSMUST00000103965 131 ntBASIC0.27□□□□□ -2.37
ShhQ62226 Gm25307-201ENSMUST00000158885 106 ntBASIC0.27□□□□□ -2.37
ShhQ62226 Gm26441-201ENSMUST00000082590 104 ntBASIC0.27□□□□□ -2.37
ShhQ62226 Mir363-201ENSMUST00000093598 75 ntBASIC0.27□□□□□ -2.37
ShhQ62226 Mir669h-201ENSMUST00000116944 125 ntBASIC0.26□□□□□ -2.37
ShhQ62226 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
ShhQ62226 Gm25328-201ENSMUST00000175013 107 ntBASIC0.26□□□□□ -2.37
ShhQ62226 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.26□□□□□ -2.37
ShhQ62226 Gm25696-201ENSMUST00000082900 105 ntBASIC0.26□□□□□ -2.37
ShhQ62226 Gm22962-201ENSMUST00000157962 73 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Gm22542-201ENSMUST00000158166 95 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Gm28001-201ENSMUST00000183561 117 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Mir3967-201ENSMUST00000198710 68 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Gm43038-201ENSMUST00000202359 88 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Gm22251-201ENSMUST00000083216 107 ntBASIC0.25□□□□□ -2.37
ShhQ62226 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Gm22354-201ENSMUST00000083919 70 ntBASIC0.25□□□□□ -2.37
ShhQ62226 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
ShhQ62226 Gm14533-201ENSMUST00000117088 93 ntBASIC0.24□□□□□ -2.37
ShhQ62226 Gm25108-201ENSMUST00000122473 78 ntBASIC0.24□□□□□ -2.37
ShhQ62226 Gm25993-201ENSMUST00000175391 80 ntBASIC0.24□□□□□ -2.37
ShhQ62226 Gm27975-201ENSMUST00000184400 101 ntBASIC0.24□□□□□ -2.37
ShhQ62226 Gm22720-201ENSMUST00000122710 87 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Gm22729-201ENSMUST00000158088 129 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Gm23821-201ENSMUST00000158738 106 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Mir3108-201ENSMUST00000175500 79 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Gm25870-201ENSMUST00000179845 79 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Gm42677-201ENSMUST00000196363 127 ntBASIC0.23□□□□□ -2.37
ShhQ62226 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.23□□□□□ -2.37
ShhQ62226 Gm25991-201ENSMUST00000102439 99 ntBASIC0.21□□□□□ -2.38
ShhQ62226 Gm25322-201ENSMUST00000122556 104 ntBASIC0.21□□□□□ -2.38
ShhQ62226 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
ShhQ62226 Mir8107-201ENSMUST00000184024 117 ntBASIC0.2□□□□□ -2.38
ShhQ62226 Gm23788-201ENSMUST00000122535 106 ntBASIC0.19□□□□□ -2.38
ShhQ62226 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
ShhQ62226 Gm29432-201ENSMUST00000185397 139 ntBASIC0.19□□□□□ -2.38
ShhQ62226 Gm23468-201ENSMUST00000157125 108 ntBASIC0.18□□□□□ -2.38
ShhQ62226 Gm24903-201ENSMUST00000158131 126 ntBASIC0.18□□□□□ -2.38
ShhQ62226 Gm23761-201ENSMUST00000158347 104 ntBASIC0.18□□□□□ -2.38
ShhQ62226 Gm23038-201ENSMUST00000083873 104 ntBASIC0.18□□□□□ -2.38
ShhQ62226 Gm24162-201ENSMUST00000093665 102 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms