Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm24321-201ENSMUST00000175348 80 ntBASIC1,34□□□□□ -2,19
Scaf1Q5U4C3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,31□□□□□ -2,2
Scaf1Q5U4C3 Mir34c-201ENSMUST00000083653 77 ntBASIC1,31□□□□□ -2,2
Scaf1Q5U4C3 Snord33-201ENSMUST00000083694 84 ntBASIC1,31□□□□□ -2,2
Scaf1Q5U4C3 Gm25991-201ENSMUST00000102439 99 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm24183-201ENSMUST00000122572 93 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm27415-201ENSMUST00000183720 95 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm25798-201ENSMUST00000082641 107 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm25854-201ENSMUST00000082792 72 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm23056-201ENSMUST00000082803 111 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Gm25894-201ENSMUST00000083458 75 ntBASIC1,3□□□□□ -2,2
Scaf1Q5U4C3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Gm23012-201ENSMUST00000104149 83 ntBASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Gm25542-201ENSMUST00000116889 94 ntBASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Gm23783-201ENSMUST00000157941 102 ntBASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Gm26207-201ENSMUST00000082909 104 ntBASIC1,29□□□□□ -2,2
Scaf1Q5U4C3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,28□□□□□ -2,2
Scaf1Q5U4C3 Gm23293-201ENSMUST00000082552 104 ntBASIC1,28□□□□□ -2,2
Scaf1Q5U4C3 Mir27b-201ENSMUST00000083541 73 ntBASIC1,28□□□□□ -2,2
Scaf1Q5U4C3 Gm24162-201ENSMUST00000093665 102 ntBASIC1,28□□□□□ -2,2
Scaf1Q5U4C3 Gm22340-201ENSMUST00000157717 114 ntBASIC1,27□□□□□ -2,21
Scaf1Q5U4C3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1,27□□□□□ -2,21
Scaf1Q5U4C3 Gm22522-201ENSMUST00000158271 151 ntBASIC1,26□□□□□ -2,21
Scaf1Q5U4C3 Gm27987-201ENSMUST00000184023 93 ntBASIC1,26□□□□□ -2,21
Scaf1Q5U4C3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1,26□□□□□ -2,21
Scaf1Q5U4C3 AC122335.1-201ENSMUST00000217587 175 ntBASIC1,26□□□□□ -2,21
Scaf1Q5U4C3 Gm24988-201ENSMUST00000104460 121 ntBASIC1,25□□□□□ -2,21
Scaf1Q5U4C3 Gm25740-201ENSMUST00000180247 107 ntBASIC1,25□□□□□ -2,21
Scaf1Q5U4C3 Gm44455-201ENSMUST00000200061 82 ntBASIC1,25□□□□□ -2,21
Scaf1Q5U4C3 Gm25160-201ENSMUST00000158914 102 ntBASIC1,24□□□□□ -2,21
Scaf1Q5U4C3 Gm25322-201ENSMUST00000122556 104 ntBASIC1,23□□□□□ -2,21
Scaf1Q5U4C3 Gm22539-201ENSMUST00000158167 117 ntBASIC1,23□□□□□ -2,21
Scaf1Q5U4C3 Gm23008-201ENSMUST00000158946 80 ntBASIC1,23□□□□□ -2,21
Scaf1Q5U4C3 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,23□□□□□ -2,21
Scaf1Q5U4C3 Snord95-201ENSMUST00000082846 68 ntBASIC1,23□□□□□ -2,21
Scaf1Q5U4C3 Gm25417-201ENSMUST00000104212 131 ntBASIC1,22□□□□□ -2,21
Scaf1Q5U4C3 Gm23237-201ENSMUST00000104639 92 ntBASIC1,22□□□□□ -2,21
Scaf1Q5U4C3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,22□□□□□ -2,21
Scaf1Q5U4C3 Gm24868-201ENSMUST00000157265 136 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Gm24064-201ENSMUST00000157486 106 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Gm24077-201ENSMUST00000158183 136 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Gm23761-201ENSMUST00000158347 104 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Mir6389-201ENSMUST00000183661 102 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Gm38113-201ENSMUST00000193704 201 ntBASIC1,21□□□□□ -2,22
Scaf1Q5U4C3 Gm24278-201ENSMUST00000104239 127 ntBASIC1,19□□□□□ -2,22
Scaf1Q5U4C3 Gm11333-201ENSMUST00000119479 148 ntBASIC1,19□□□□□ -2,22
Scaf1Q5U4C3 Gm25656-201ENSMUST00000158466 66 ntBASIC1,19□□□□□ -2,22
Scaf1Q5U4C3 Mir3109-201ENSMUST00000175301 88 ntBASIC1,19□□□□□ -2,22
Scaf1Q5U4C3 Mir669h-201ENSMUST00000116944 125 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 Gm24495-201ENSMUST00000178575 79 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 Gm22253-201ENSMUST00000179870 79 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 Gm27980-201ENSMUST00000184094 169 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 mt-Tm-201ENSMUST00000082395 69 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 Gm22303-201ENSMUST00000082686 122 ntBASIC1,18□□□□□ -2,22
Scaf1Q5U4C3 Gm24199-201ENSMUST00000157808 136 ntBASIC1,17□□□□□ -2,22
Scaf1Q5U4C3 Gm27289-201ENSMUST00000183341 82 ntBASIC1,17□□□□□ -2,22
Scaf1Q5U4C3 Gm24920-201ENSMUST00000083018 85 ntBASIC1,17□□□□□ -2,22
Scaf1Q5U4C3 Gm24579-201ENSMUST00000103964 144 ntBASIC1,16□□□□□ -2,22
Scaf1Q5U4C3 Gm24555-201ENSMUST00000104548 124 ntBASIC1,15□□□□□ -2,23
Scaf1Q5U4C3 Gm22203-201ENSMUST00000158605 58 ntBASIC1,15□□□□□ -2,23
Scaf1Q5U4C3 Gm42677-201ENSMUST00000196363 127 ntBASIC1,15□□□□□ -2,23
Scaf1Q5U4C3 Gm6293-201ENSMUST00000050339 195 ntBASIC1,15□□□□□ -2,23
Scaf1Q5U4C3 Mir7229-201ENSMUST00000197062 53 ntBASIC1,14□□□□□ -2,23
Scaf1Q5U4C3 Mir1197-201ENSMUST00000117037 120 ntBASIC1,13□□□□□ -2,23
Scaf1Q5U4C3 Gm25247-201ENSMUST00000175475 90 ntBASIC1,13□□□□□ -2,23
Scaf1Q5U4C3 Gm44327-201ENSMUST00000200068 117 ntBASIC1,13□□□□□ -2,23
Scaf1Q5U4C3 AC158537.2-201ENSMUST00000223575 150 ntBASIC1,13□□□□□ -2,23
Scaf1Q5U4C3 Gm23376-201ENSMUST00000082938 160 ntBASIC1,13□□□□□ -2,23
Scaf1Q5U4C3 Gm23570-201ENSMUST00000083029 104 ntBASIC1,12□□□□□ -2,23
Scaf1Q5U4C3 Gm25756-201ENSMUST00000103990 136 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm23126-201ENSMUST00000104260 134 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm24772-201ENSMUST00000158507 110 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm26499-201ENSMUST00000178544 79 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm26096-201ENSMUST00000179084 79 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm27587-201ENSMUST00000185116 163 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 AC124196.2-201ENSMUST00000224835 145 ntBASIC1,11□□□□□ -2,23
Scaf1Q5U4C3 Gm25609-201ENSMUST00000104019 104 ntBASIC1,1□□□□□ -2,23
Scaf1Q5U4C3 Gm23306-201ENSMUST00000179058 105 ntBASIC1,1□□□□□ -2,23
Scaf1Q5U4C3 Gm25847-201ENSMUST00000116793 96 ntBASIC1,09□□□□□ -2,23
Scaf1Q5U4C3 Gm25964-201ENSMUST00000157171 97 ntBASIC1,09□□□□□ -2,23
Scaf1Q5U4C3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1,09□□□□□ -2,23
Scaf1Q5U4C3 Gm24963-201ENSMUST00000157916 144 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Gm22095-201ENSMUST00000158984 150 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Gm27607-201ENSMUST00000185162 122 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Gm23735-201ENSMUST00000082551 134 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Gm24918-201ENSMUST00000083022 130 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Mir216a-201ENSMUST00000083605 72 ntBASIC1,08□□□□□ -2,24
Scaf1Q5U4C3 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,07□□□□□ -2,24
Scaf1Q5U4C3 Mir3105-201ENSMUST00000175480 85 ntBASIC1,07□□□□□ -2,24
Scaf1Q5U4C3 Gm29432-201ENSMUST00000185397 139 ntBASIC1,07□□□□□ -2,24
Scaf1Q5U4C3 Gm44345-201ENSMUST00000199560 135 ntBASIC1,07□□□□□ -2,24
Scaf1Q5U4C3 Gm25619-201ENSMUST00000122621 104 ntBASIC1,06□□□□□ -2,24
Scaf1Q5U4C3 Gm23826-201ENSMUST00000157394 119 ntBASIC1,06□□□□□ -2,24
Scaf1Q5U4C3 Gm20305-201ENSMUST00000193226 177 ntBASIC1,06□□□□□ -2,24
Scaf1Q5U4C3 Gm25950-201ENSMUST00000175331 100 ntBASIC1,05□□□□□ -2,24
Scaf1Q5U4C3 Gm23726-201ENSMUST00000178937 67 ntBASIC1,05□□□□□ -2,24
Scaf1Q5U4C3 Gm23785-201ENSMUST00000116741 96 ntBASIC1,04□□□□□ -2,24
Scaf1Q5U4C3 Gm26359-201ENSMUST00000158873 101 ntBASIC1,04□□□□□ -2,24
Scaf1Q5U4C3 Gm24323-201ENSMUST00000175342 77 ntBASIC1,04□□□□□ -2,24
Retrieved 100 of 76,532 protein–RNA pairs in 9,6 ms