Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mir100-201ENSMUST00000175270 80 ntBASIC2,83□□□□□ -1,96
Trim41Q5NCC3 Mir30a-201ENSMUST00000083471 71 ntBASIC2,83□□□□□ -1,96
Trim41Q5NCC3 Gm24555-201ENSMUST00000104548 124 ntBASIC2,82□□□□□ -1,96
Trim41Q5NCC3 Gm22459-201ENSMUST00000082577 108 ntBASIC2,82□□□□□ -1,96
Trim41Q5NCC3 Snord95-201ENSMUST00000082846 68 ntBASIC2,82□□□□□ -1,96
Trim41Q5NCC3 Mir669a-3-201ENSMUST00000102074 109 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Gm25040-201ENSMUST00000103877 66 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Gm23130-201ENSMUST00000104252 74 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Gm22663-201ENSMUST00000158721 102 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Gm27265-201ENSMUST00000183559 77 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Mir219b-201ENSMUST00000198317 65 ntBASIC2,81□□□□□ -1,96
Trim41Q5NCC3 Mir3096-201ENSMUST00000116685 71 ntBASIC2,8□□□□□ -1,96
Trim41Q5NCC3 Gm24467-201ENSMUST00000157887 126 ntBASIC2,8□□□□□ -1,96
Trim41Q5NCC3 Mir6904-201ENSMUST00000183443 67 ntBASIC2,8□□□□□ -1,96
Trim41Q5NCC3 Mir377-201ENSMUST00000083504 68 ntBASIC2,8□□□□□ -1,96
Trim41Q5NCC3 Gm22785-201ENSMUST00000104087 132 ntBASIC2,79□□□□□ -1,96
Trim41Q5NCC3 Gm24381-201ENSMUST00000122697 104 ntBASIC2,79□□□□□ -1,96
Trim41Q5NCC3 n-R5s12-201ENSMUST00000083785 119 ntBASIC2,79□□□□□ -1,96
Trim41Q5NCC3 Gm23122-201ENSMUST00000157645 103 ntBASIC2,78□□□□□ -1,96
Trim41Q5NCC3 Gm25886-201ENSMUST00000157780 114 ntBASIC2,77□□□□□ -1,97
Trim41Q5NCC3 Gm25010-201ENSMUST00000158403 65 ntBASIC2,77□□□□□ -1,97
Trim41Q5NCC3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC2,76□□□□□ -1,97
Trim41Q5NCC3 Gm23636-201ENSMUST00000175070 95 ntBASIC2,76□□□□□ -1,97
Trim41Q5NCC3 Gm25440-201ENSMUST00000158279 154 ntBASIC2,75□□□□□ -1,97
Trim41Q5NCC3 Mir5124a-201ENSMUST00000175528 72 ntBASIC2,75□□□□□ -1,97
Trim41Q5NCC3 Gm24996-201ENSMUST00000158390 99 ntBASIC2,74□□□□□ -1,97
Trim41Q5NCC3 Gm23339-201ENSMUST00000158962 139 ntBASIC2,74□□□□□ -1,97
Trim41Q5NCC3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2,74□□□□□ -1,97
Trim41Q5NCC3 Gm26438-201ENSMUST00000082593 107 ntBASIC2,74□□□□□ -1,97
Trim41Q5NCC3 Gm23126-201ENSMUST00000104260 134 ntBASIC2,73□□□□□ -1,97
Trim41Q5NCC3 Gm26274-201ENSMUST00000157103 321 ntBASIC2,73□□□□□ -1,97
Trim41Q5NCC3 Mir466m-201ENSMUST00000175052 84 ntBASIC2,73□□□□□ -1,97
Trim41Q5NCC3 Mir7663-201ENSMUST00000183950 61 ntBASIC2,73□□□□□ -1,97
Trim41Q5NCC3 Gm22652-201ENSMUST00000083207 131 ntBASIC2,73□□□□□ -1,97
Trim41Q5NCC3 Gm22965-201ENSMUST00000157958 101 ntBASIC2,72□□□□□ -1,97
Trim41Q5NCC3 Gm22164-201ENSMUST00000158413 106 ntBASIC2,72□□□□□ -1,97
Trim41Q5NCC3 Gm25715-201ENSMUST00000158627 125 ntBASIC2,72□□□□□ -1,97
Trim41Q5NCC3 Gm22595-201ENSMUST00000104250 130 ntBASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Gm13065-201ENSMUST00000119178 141 ntBASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Gm24797-201ENSMUST00000178103 107 ntBASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Gm27717-201ENSMUST00000183933 151 ntBASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Mir7231-201ENSMUST00000196252 61 ntBASIC2,71□□□□□ -1,98
Trim41Q5NCC3 Gm24400-201ENSMUST00000157865 107 ntBASIC2,7□□□□□ -1,98
Trim41Q5NCC3 Gm44384-201ENSMUST00000200208 114 ntBASIC2,7□□□□□ -1,98
Trim41Q5NCC3 Gm24259-201ENSMUST00000083740 107 ntBASIC2,7□□□□□ -1,98
Trim41Q5NCC3 Snord69-201ENSMUST00000104024 80 ntBASIC2,69□□□□□ -1,98
Trim41Q5NCC3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2,69□□□□□ -1,98
Trim41Q5NCC3 Mir1949-202ENSMUST00000199259 70 ntBASIC2,68□□□□□ -1,98
Trim41Q5NCC3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Gm24579-201ENSMUST00000103964 144 ntBASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Gm22780-201ENSMUST00000104084 132 ntBASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Gm24174-201ENSMUST00000158933 111 ntBASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Snord96a-201ENSMUST00000082791 81 ntBASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Mir3071-201ENSMUST00000093621 80 ntBASIC2,67□□□□□ -1,98
Trim41Q5NCC3 Gm25166-201ENSMUST00000158909 111 ntBASIC2,66□□□□□ -1,98
Trim41Q5NCC3 Gm26259-201ENSMUST00000104778 97 ntBASIC2,65□□□□□ -1,99
Trim41Q5NCC3 Gm27493-201ENSMUST00000184128 78 ntBASIC2,65□□□□□ -1,99
Trim41Q5NCC3 Gm42677-201ENSMUST00000196363 127 ntBASIC2,65□□□□□ -1,99
Trim41Q5NCC3 AC147560.1-201ENSMUST00000197528 107 ntBASIC2,65□□□□□ -1,99
Trim41Q5NCC3 Gm14533-201ENSMUST00000117088 93 ntBASIC2,64□□□□□ -1,99
Trim41Q5NCC3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC2,63□□□□□ -1,99
Trim41Q5NCC3 Gm24723-201ENSMUST00000158233 132 ntBASIC2,63□□□□□ -1,99
Trim41Q5NCC3 Gm25936-201ENSMUST00000179952 114 ntBASIC2,63□□□□□ -1,99
Trim41Q5NCC3 Gm27420-201ENSMUST00000183823 79 ntBASIC2,63□□□□□ -1,99
Trim41Q5NCC3 Mir141-201ENSMUST00000083540 72 ntBASIC2,63□□□□□ -1,99
Trim41Q5NCC3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC2,62□□□□□ -1,99
Trim41Q5NCC3 Gm25495-201ENSMUST00000104431 131 ntBASIC2,62□□□□□ -1,99
Trim41Q5NCC3 Gm6272-201ENSMUST00000121256 171 ntBASIC2,62□□□□□ -1,99
Trim41Q5NCC3 Gm26224-201ENSMUST00000082506 80 ntBASIC2,62□□□□□ -1,99
Trim41Q5NCC3 Gm23590-201ENSMUST00000157661 104 ntBASIC2,61□□□□□ -1,99
Trim41Q5NCC3 Gm22431-201ENSMUST00000158545 107 ntBASIC2,61□□□□□ -1,99
Trim41Q5NCC3 Gm27248-201ENSMUST00000184004 166 ntBASIC2,61□□□□□ -1,99
Trim41Q5NCC3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC2,61□□□□□ -1,99
Trim41Q5NCC3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2,61□□□□□ -1,99
Trim41Q5NCC3 Gm24070-201ENSMUST00000104519 130 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm23558-201ENSMUST00000157823 80 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm24531-201ENSMUST00000157945 100 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm22386-201ENSMUST00000158192 129 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm25768-201ENSMUST00000158570 98 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm23180-201ENSMUST00000158686 125 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2,6□□□□□ -1,99
Trim41Q5NCC3 Gm24772-201ENSMUST00000158507 110 ntBASIC2,59□□□□□ -1,99
Trim41Q5NCC3 Gm26007-201ENSMUST00000158798 120 ntBASIC2,59□□□□□ -1,99
Trim41Q5NCC3 Gm23008-201ENSMUST00000158946 80 ntBASIC2,59□□□□□ -1,99
Trim41Q5NCC3 Mir6351-201ENSMUST00000183826 99 ntBASIC2,59□□□□□ -1,99
Trim41Q5NCC3 Gm25968-201ENSMUST00000157167 100 ntBASIC2,58□□□□□ -2
Trim41Q5NCC3 Mir669f-201ENSMUST00000103850 121 ntBASIC2,57□□□□□ -2
Trim41Q5NCC3 Gm24233-201ENSMUST00000104317 122 ntBASIC2,57□□□□□ -2
Trim41Q5NCC3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC2,57□□□□□ -2
Trim41Q5NCC3 AC113441.1-201ENSMUST00000223464 134 ntBASIC2,57□□□□□ -2
Trim41Q5NCC3 Gm23961-201ENSMUST00000104685 97 ntBASIC2,56□□□□□ -2
Trim41Q5NCC3 Gm25055-201ENSMUST00000157369 76 ntBASIC2,56□□□□□ -2
Trim41Q5NCC3 Gm25506-201ENSMUST00000104339 70 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Gm22603-201ENSMUST00000157603 96 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Gm25656-201ENSMUST00000158466 66 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Gm24508-201ENSMUST00000180104 107 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Gm24218-201ENSMUST00000180163 105 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Mir500-201ENSMUST00000093600 92 ntBASIC2,55□□□□□ -2
Trim41Q5NCC3 Gm25087-201ENSMUST00000101992 78 ntBASIC2,54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 114,7 ms